RNA–Protein interactions for RNA: ENST00000466532.1

COL9A3-206, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-206ENST00000466532 JCHAINP01591 159 aa19■□□□□ 0.63
COL9A3-206ENST00000466532 THRAP10827 490 aa19■□□□□ 0.63
COL9A3-206ENST00000466532 FGF3P11487 239 aaPredicted RBP19■□□□□ 0.63
COL9A3-206ENST00000466532 KDELR1P24390 212 aa19■□□□□ 0.63
COL9A3-206ENST00000466532 CSTF2P33240 577 aaKnown RBP eCLIP19■□□□□ 0.63
COL9A3-206ENST00000466532 MAN1A1P33908 653 aa19■□□□□ 0.63
COL9A3-206ENST00000466532 SPINT3P49223 89 aa19■□□□□ 0.63
COL9A3-206ENST00000466532 GPLD1P80108 840 aa19■□□□□ 0.63
COL9A3-206ENST00000466532 SQSTM1Q13501 440 aa19■□□□□ 0.63
COL9A3-206ENST00000466532 QPCTQ16769 361 aa19■□□□□ 0.63
COL9A3-206ENST00000466532 LINC00303Q3SY05 128 aa19■□□□□ 0.63
COL9A3-206ENST00000466532 HENMT1Q5T8I9 393 aaKnown RBP19■□□□□ 0.63
COL9A3-206ENST00000466532 CHST15Q7LFX5 561 aaPredicted RBP19■□□□□ 0.63
COL9A3-206ENST00000466532 SFRP1Q8N474 314 aa19■□□□□ 0.63
COL9A3-206ENST00000466532 EXD3Q8N9H8 876 aa19■□□□□ 0.63
COL9A3-206ENST00000466532 ZSCAN1Q8NBB4 408 aa19■□□□□ 0.63
COL9A3-206ENST00000466532 AGBL5Q8NDL9 886 aa19■□□□□ 0.63
COL9A3-206ENST00000466532 CCDC112Q8NEF3 446 aa19■□□□□ 0.63
COL9A3-206ENST00000466532 CCHCR1Q8TD31 782 aa19■□□□□ 0.63
COL9A3-206ENST00000466532 JPH3Q8WXH2 748 aaPredicted RBP19■□□□□ 0.63
COL9A3-206ENST00000466532 RAPGEF5Q92565 580 aa19■□□□□ 0.63
COL9A3-206ENST00000466532 EXTL1Q92935 676 aa19■□□□□ 0.63
COL9A3-206ENST00000466532 PMEPA1Q969W9 287 aa19■□□□□ 0.63
COL9A3-206ENST00000466532 AHCYL2Q96HN2 611 aaKnown RBP19■□□□□ 0.63
COL9A3-206ENST00000466532 RNF157Q96PX1 679 aa19■□□□□ 0.63
COL9A3-206ENST00000466532 WDR24Q96S15 920 aa19■□□□□ 0.63
COL9A3-206ENST00000466532 ARHGAP9Q9BRR9 750 aa19■□□□□ 0.63
COL9A3-206ENST00000466532 MLPHQ9BV36 600 aaPredicted RBP19■□□□□ 0.63
COL9A3-206ENST00000466532 XPO4Q9C0E2 1151 aaKnown RBP19■□□□□ 0.63
COL9A3-206ENST00000466532 FAM83DQ9H4H8 585 aa19■□□□□ 0.63
COL9A3-206ENST00000466532 TMEM9Q9P0T7 183 aa19■□□□□ 0.63
COL9A3-206ENST00000466532 CNOT6Q9ULM6 557 aaKnown RBP19■□□□□ 0.63
COL9A3-206ENST00000466532 FADS2P1A8MWK0 482 aa18.99■□□□□ 0.63
COL9A3-206ENST00000466532 ANKRD66B4E2M5 251 aa18.99■□□□□ 0.63
COL9A3-206ENST00000466532 EML2O95834 649 aa18.99■□□□□ 0.63
COL9A3-206ENST00000466532 ITGB2P05107 769 aa18.99■□□□□ 0.63
COL9A3-206ENST00000466532 TPM3P06753 285 aa18.99■□□□□ 0.63
COL9A3-206ENST00000466532 MMP2P08253 660 aa18.99■□□□□ 0.63
COL9A3-206ENST00000466532 PPIDQ08752 370 aaKnown RBP18.99■□□□□ 0.63
COL9A3-206ENST00000466532 MESDQ14696 234 aa18.99■□□□□ 0.63
COL9A3-206ENST00000466532 TMEM71Q6P5X7 295 aa18.99■□□□□ 0.63
COL9A3-206ENST00000466532 OR10G6Q8NH81 332 aa18.99■□□□□ 0.63
COL9A3-206ENST00000466532 DEF6Q9H4E7 631 aa18.99■□□□□ 0.63
COL9A3-206ENST00000466532 PCDHGA3Q9Y5H0 932 aa18.99■□□□□ 0.63
COL9A3-206ENST00000466532 HEY1Q9Y5J3 304 aa18.99■□□□□ 0.63
COL9A3-206ENST00000466532 SETXQ7Z333 2677 aaKnown RBP18.98■□□□□ 0.63
COL9A3-206ENST00000466532 LRRD1A4D1F6 860 aa18.98■□□□□ 0.63
COL9A3-206ENST00000466532 DUX1O43812 170 aa18.98■□□□□ 0.63
COL9A3-206ENST00000466532 TMEM253P0C7T8 217 aa18.98■□□□□ 0.63
COL9A3-206ENST00000466532 WT1P19544 449 aaPredicted RBP18.98■□□□□ 0.63
COL9A3-206ENST00000466532 ARSDP51689 593 aa18.98■□□□□ 0.63
COL9A3-206ENST00000466532 IFI35P80217 286 aaPredicted RBP18.98■□□□□ 0.63
COL9A3-206ENST00000466532 HHEXQ03014 270 aa18.98■□□□□ 0.63
COL9A3-206ENST00000466532 ZBTB17Q13105 803 aa18.98■□□□□ 0.63
COL9A3-206ENST00000466532 GALNT3Q14435 633 aa18.98■□□□□ 0.63
COL9A3-206ENST00000466532 ASTE1Q2TB18 679 aaPredicted RBP18.98■□□□□ 0.63
COL9A3-206ENST00000466532 CHCHD2P9Q5T1J5 151 aaPredicted RBP18.98■□□□□ 0.63
COL9A3-206ENST00000466532 PLD5Q8N7P1 536 aa18.98■□□□□ 0.63
COL9A3-206ENST00000466532 CNTD1Q8N815 330 aa18.98■□□□□ 0.63
COL9A3-206ENST00000466532 ART4Q93070 314 aa18.98■□□□□ 0.63
COL9A3-206ENST00000466532 ADGRE3Q9BY15 652 aa18.98■□□□□ 0.63
COL9A3-206ENST00000466532 STN1Q9H668 368 aaKnown RBP18.98■□□□□ 0.63
COL9A3-206ENST00000466532 RMI1Q9H9A7 625 aa18.98■□□□□ 0.63
COL9A3-206ENST00000466532 KCNK6Q9Y257 313 aa18.98■□□□□ 0.63
COL9A3-206ENST00000466532 RGSL1A5PLK6 1076 aa18.97■□□□□ 0.63
COL9A3-206ENST00000466532 ACP5P13686 325 aa18.97■□□□□ 0.63
COL9A3-206ENST00000466532 ATP1A2P50993 1020 aa18.97■□□□□ 0.63
COL9A3-206ENST00000466532 AP1B1Q10567 949 aa18.97■□□□□ 0.63
COL9A3-206ENST00000466532 FAM182AQ5T1J6 154 aa18.97■□□□□ 0.63
COL9A3-206ENST00000466532 XKR5Q6UX68 686 aa18.97■□□□□ 0.63
COL9A3-206ENST00000466532 LYSMD3Q7Z3D4 306 aa18.97■□□□□ 0.63
COL9A3-206ENST00000466532 FAM129CQ86XR2 697 aa18.97■□□□□ 0.63
COL9A3-206ENST00000466532 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.97■□□□□ 0.63
COL9A3-206ENST00000466532 NKD1Q969G9 470 aa18.97■□□□□ 0.63
COL9A3-206ENST00000466532 DDA1Q9BW61 102 aa18.97■□□□□ 0.63
COL9A3-206ENST00000466532 CEP41Q9BYV8 373 aa18.97■□□□□ 0.63
COL9A3-206ENST00000466532 OCIAD1Q9NX40 245 aa18.97■□□□□ 0.63
COL9A3-206ENST00000466532 SLC39A1Q9NY26 324 aa18.97■□□□□ 0.63
COL9A3-206ENST00000466532 TBC1D29Q9UFV1 150 aa18.97■□□□□ 0.63
COL9A3-206ENST00000466532 B3GALT1Q9Y5Z6 326 aa18.97■□□□□ 0.63
COL9A3-206ENST00000466532 SSU72P8A0A1W2PR75 194 aa18.96■□□□□ 0.63
COL9A3-206ENST00000466532 EFCAB7A8K855 629 aa18.96■□□□□ 0.63
COL9A3-206ENST00000466532 SLC28A2O43868 658 aa18.96■□□□□ 0.63
COL9A3-206ENST00000466532 AKR1B10O60218 316 aa18.96■□□□□ 0.63
COL9A3-206ENST00000466532 SNX2O60749 519 aa18.96■□□□□ 0.63
COL9A3-206ENST00000466532 CYP4F2P78329 520 aa18.96■□□□□ 0.63
COL9A3-206ENST00000466532 NFATC3Q12968 1075 aa18.96■□□□□ 0.63
COL9A3-206ENST00000466532 NFATC2Q13469 925 aa18.96■□□□□ 0.63
COL9A3-206ENST00000466532 SNAP47Q5SQN1 464 aa18.96■□□□□ 0.63
COL9A3-206ENST00000466532 SLC9A4Q6AI14 798 aa18.96■□□□□ 0.63
COL9A3-206ENST00000466532 OR8K1Q8NGG5 319 aa18.96■□□□□ 0.63
COL9A3-206ENST00000466532 SLC35G2Q8TBE7 412 aa18.96■□□□□ 0.63
COL9A3-206ENST00000466532 DNAJC7Q99615 494 aa18.96■□□□□ 0.63
COL9A3-206ENST00000466532 HERPUD2Q9BSE4 406 aa18.96■□□□□ 0.63
COL9A3-206ENST00000466532 SPATA16Q9BXB7 569 aa18.96■□□□□ 0.63
COL9A3-206ENST00000466532 ZFYVE1Q9HBF4 777 aa18.96■□□□□ 0.63
COL9A3-206ENST00000466532 SARS2Q9NP81 518 aaKnown RBP18.96■□□□□ 0.63
COL9A3-206ENST00000466532 BOD1L1Q8NFC6 3051 aa18.95■□□□□ 0.62
COL9A3-206ENST00000466532 A8MU76 341 aa18.95■□□□□ 0.62
COL9A3-206ENST00000466532 ZNF487B1APH4 448 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms