RNA–Protein interactions for RNA: ENST00000466260.1

RTFDC1-205, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-205ENST00000466260 PDE2AO00408 941 aaPredicted RBP9.68□□□□□ -0.86
RTFDC1-205ENST00000466260 USP12O75317 370 aa9.68□□□□□ -0.86
RTFDC1-205ENST00000466260 SOD1P00441 154 aa9.68□□□□□ -0.86
RTFDC1-205ENST00000466260 AK4P27144 223 aaPredicted RBP9.68□□□□□ -0.86
RTFDC1-205ENST00000466260 CXCR5P32302 372 aa9.68□□□□□ -0.86
RTFDC1-205ENST00000466260 TRIM23P36406 574 aa9.68□□□□□ -0.86
RTFDC1-205ENST00000466260 KLF1Q13351 362 aaPredicted RBP9.68□□□□□ -0.86
RTFDC1-205ENST00000466260 NR0B2Q15466 257 aa9.68□□□□□ -0.86
RTFDC1-205ENST00000466260 SLC14A2Q15849 920 aa9.68□□□□□ -0.86
RTFDC1-205ENST00000466260 KCTD19Q17RG1 926 aaPredicted RBP9.68□□□□□ -0.86
RTFDC1-205ENST00000466260 MAP9Q49MG5 647 aa9.68□□□□□ -0.86
RTFDC1-205ENST00000466260 ZNF569Q5MCW4 686 aa9.68□□□□□ -0.86
RTFDC1-205ENST00000466260 SLC30A9Q6PML9 568 aa9.68□□□□□ -0.86
RTFDC1-205ENST00000466260 UNQ6494/PRO21346Q6UXR6 183 aa9.68□□□□□ -0.86
RTFDC1-205ENST00000466260 GLT6D1Q7Z4J2 308 aa9.68□□□□□ -0.86
RTFDC1-205ENST00000466260 PRUNE1Q86TP1 453 aa9.68□□□□□ -0.86
RTFDC1-205ENST00000466260 GKN2Q86XP6 184 aa9.68□□□□□ -0.86
RTFDC1-205ENST00000466260 SLC13A5Q86YT5 568 aaPredicted RBP9.68□□□□□ -0.86
RTFDC1-205ENST00000466260 SFTPA2Q8IWL1 248 aa9.68□□□□□ -0.86
RTFDC1-205ENST00000466260 SLC35F3Q8IY50 421 aa9.68□□□□□ -0.86
RTFDC1-205ENST00000466260 CBARPQ8N350 705 aaPredicted RBP9.68□□□□□ -0.86
RTFDC1-205ENST00000466260 FSTL5Q8N475 847 aaPredicted RBP9.68□□□□□ -0.86
RTFDC1-205ENST00000466260 FAM71DQ8N9W8 422 aa9.68□□□□□ -0.86
RTFDC1-205ENST00000466260 KYQ8NBH2 561 aa9.68□□□□□ -0.86
RTFDC1-205ENST00000466260 GPR26Q8NDV2 337 aa9.68□□□□□ -0.86
RTFDC1-205ENST00000466260 GLMNQ92990 594 aa9.68□□□□□ -0.86
RTFDC1-205ENST00000466260 TADA1Q96BN2 335 aa9.68□□□□□ -0.86
RTFDC1-205ENST00000466260 EID2BQ96D98 161 aa9.68□□□□□ -0.86
RTFDC1-205ENST00000466260 PKNOX2Q96KN3 472 aa9.68□□□□□ -0.86
RTFDC1-205ENST00000466260 SPATA13Q96N96 652 aa9.68□□□□□ -0.86
RTFDC1-205ENST00000466260 WDR24Q96S15 920 aa9.68□□□□□ -0.86
RTFDC1-205ENST00000466260 LYSMD1Q96S90 227 aa9.68□□□□□ -0.86
RTFDC1-205ENST00000466260 GORASP1Q9BQQ3 440 aa9.68□□□□□ -0.86
RTFDC1-205ENST00000466260 FRMD8Q9BZ67 464 aaPredicted RBP9.68□□□□□ -0.86
RTFDC1-205ENST00000466260 DPEP2Q9H4A9 486 aa9.68□□□□□ -0.86
RTFDC1-205ENST00000466260 EVA1BQ9NVM1 165 aa9.68□□□□□ -0.86
RTFDC1-205ENST00000466260 TRHDEQ9UKU6 1024 aa9.68□□□□□ -0.86
RTFDC1-205ENST00000466260 GPR34Q9UPC5 381 aa9.68□□□□□ -0.86
RTFDC1-205ENST00000466260 WASF3Q9UPY6 502 aa9.68□□□□□ -0.86
RTFDC1-205ENST00000466260 PRKAB1Q9Y478 270 aa9.68□□□□□ -0.86
RTFDC1-205ENST00000466260 PLEKHM1Q9Y4G2 1056 aa9.68□□□□□ -0.86
RTFDC1-205ENST00000466260 OAS3Q9Y6K5 1087 aaKnown RBP9.68□□□□□ -0.86
RTFDC1-205ENST00000466260 CSNK1G3Q9Y6M4 447 aa9.68□□□□□ -0.86
RTFDC1-205ENST00000466260 V9GYY5 206 aaPredicted RBP9.68□□□□□ -0.86
RTFDC1-205ENST00000466260 LY6G6EA0A0G2JKS1 128 aa9.67□□□□□ -0.86
RTFDC1-205ENST00000466260 CTAGE15A4D2H0 777 aa9.67□□□□□ -0.86
RTFDC1-205ENST00000466260 LMO7DNF2Z398 122 aa9.67□□□□□ -0.86
RTFDC1-205ENST00000466260 CASC3O15234 703 aaKnown RBP9.67□□□□□ -0.86
RTFDC1-205ENST00000466260 GPR39O43194 453 aa9.67□□□□□ -0.86
RTFDC1-205ENST00000466260 CEP104O60308 925 aa9.67□□□□□ -0.86
RTFDC1-205ENST00000466260 MTX2O75431 263 aa9.67□□□□□ -0.86
RTFDC1-205ENST00000466260 ANXA9O76027 345 aa9.67□□□□□ -0.86
RTFDC1-205ENST00000466260 IFNB1P01574 187 aa9.67□□□□□ -0.86
RTFDC1-205ENST00000466260 FUCA1P04066 466 aa9.67□□□□□ -0.86
RTFDC1-205ENST00000466260 FGF1P05230 155 aa9.67□□□□□ -0.86
RTFDC1-205ENST00000466260 CEACAM5P06731 702 aa9.67□□□□□ -0.86
RTFDC1-205ENST00000466260 CTAGE8P0CG41 777 aa9.67□□□□□ -0.86
RTFDC1-205ENST00000466260 JUPP14923 745 aa9.67□□□□□ -0.86
RTFDC1-205ENST00000466260 BPIP17213 487 aa9.67□□□□□ -0.86
RTFDC1-205ENST00000466260 HLA-DPA1P20036 260 aa9.67□□□□□ -0.86
RTFDC1-205ENST00000466260 ACP1P24666 158 aa9.67□□□□□ -0.86
RTFDC1-205ENST00000466260 DUSP3P51452 185 aaPredicted RBP9.67□□□□□ -0.86
RTFDC1-205ENST00000466260 SHC2P98077 582 aa9.67□□□□□ -0.86
RTFDC1-205ENST00000466260 DPTQ07507 201 aa9.67□□□□□ -0.86
RTFDC1-205ENST00000466260 PTPRCAPQ14761 206 aa9.67□□□□□ -0.86
RTFDC1-205ENST00000466260 SLC1A5Q15758 541 aa9.67□□□□□ -0.86
RTFDC1-205ENST00000466260 PLA2G4EQ3MJ16 856 aa9.67□□□□□ -0.86
RTFDC1-205ENST00000466260 PERM1Q5SV97 790 aa9.67□□□□□ -0.86
RTFDC1-205ENST00000466260 HENMT1Q5T8I9 393 aaKnown RBP9.67□□□□□ -0.86
RTFDC1-205ENST00000466260 ADGRD1Q6QNK2 874 aa9.67□□□□□ -0.86
RTFDC1-205ENST00000466260 ADAMTSL4Q6UY14 1074 aa9.67□□□□□ -0.86
RTFDC1-205ENST00000466260 ZNF765Q7L2R6 523 aa9.67□□□□□ -0.86
RTFDC1-205ENST00000466260 CTAGE6Q86UF2 777 aa9.67□□□□□ -0.86
RTFDC1-205ENST00000466260 CTAGE4Q8IX94 777 aa9.67□□□□□ -0.86
RTFDC1-205ENST00000466260 PARP9Q8IXQ6 854 aa9.67□□□□□ -0.86
RTFDC1-205ENST00000466260 NRSN1Q8IZ57 195 aa9.67□□□□□ -0.86
RTFDC1-205ENST00000466260 FAM46DQ8NEK8 389 aa9.67□□□□□ -0.86
RTFDC1-205ENST00000466260 TRIM58Q8NG06 486 aa9.67□□□□□ -0.86
RTFDC1-205ENST00000466260 GDAP1Q8TB36 358 aa9.67□□□□□ -0.86
RTFDC1-205ENST00000466260 MAPK15Q8TD08 544 aa9.67□□□□□ -0.86
RTFDC1-205ENST00000466260 HNRNPLLQ8WVV9 542 aaKnown RBP9.67□□□□□ -0.86
RTFDC1-205ENST00000466260 SCG3Q8WXD2 468 aaKnown RBP9.67□□□□□ -0.86
RTFDC1-205ENST00000466260 HIC2Q96JB3 615 aa9.67□□□□□ -0.86
RTFDC1-205ENST00000466260 OR2M4Q96R27 311 aa9.67□□□□□ -0.86
RTFDC1-205ENST00000466260 CARD6Q9BX69 1037 aa9.67□□□□□ -0.86
RTFDC1-205ENST00000466260 MAGEE1Q9HCI5 957 aa9.67□□□□□ -0.86
RTFDC1-205ENST00000466260 PIH1D1Q9NWS0 290 aaKnown RBP9.67□□□□□ -0.86
RTFDC1-205ENST00000466260 MSRB2Q9Y3D2 182 aa9.67□□□□□ -0.86
RTFDC1-205ENST00000466260 NEUROG3Q9Y4Z2 214 aa9.67□□□□□ -0.86
RTFDC1-205ENST00000466260 PCDHGA1Q9Y5H4 931 aa9.67□□□□□ -0.86
RTFDC1-205ENST00000466260 PCYT1BQ9Y5K3 369 aaPredicted RBP9.67□□□□□ -0.86
RTFDC1-205ENST00000466260 U3KQA8 63 aa9.67□□□□□ -0.86
RTFDC1-205ENST00000466260 ASXL3Q9C0F0 2248 aa9.67□□□□□ -0.86
RTFDC1-205ENST00000466260 LOC285095A0A1B0GVY8 99 aa9.66□□□□□ -0.86
RTFDC1-205ENST00000466260 CCDC78A2IDD5 438 aa9.66□□□□□ -0.86
RTFDC1-205ENST00000466260 TK2O00142 265 aa9.66□□□□□ -0.86
RTFDC1-205ENST00000466260 AGRPO00253 132 aa9.66□□□□□ -0.86
RTFDC1-205ENST00000466260 TPP1O14773 563 aa9.66□□□□□ -0.86
RTFDC1-205ENST00000466260 TNFRSF10CO14798 259 aa9.66□□□□□ -0.86
RTFDC1-205ENST00000466260 SLC25A14O95258 325 aaPredicted RBP9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms