RNA–Protein interactions for RNA: ENST00000466222.6

CAPN3-209, Transcript of calpain 3, humanhuman

TSL 2

Gene CAPN3, Length 1,934 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-209ENST00000466222 TIMP2P16035 220 aa18.54■□□□□ 0.56
CAPN3-209ENST00000466222 VHLP40337 213 aa18.54■□□□□ 0.56
CAPN3-209ENST00000466222 TNFRSF4P43489 277 aa18.54■□□□□ 0.56
CAPN3-209ENST00000466222 DNAL1Q4LDG9 190 aa18.54■□□□□ 0.56
CAPN3-209ENST00000466222 KIAA0930Q6ICG6 404 aaPredicted RBP18.54■□□□□ 0.56
CAPN3-209ENST00000466222 RFLNAQ6ZTI6 216 aa18.54■□□□□ 0.56
CAPN3-209ENST00000466222 NUDT18Q6ZVK8 323 aa18.54■□□□□ 0.56
CAPN3-209ENST00000466222 TTC7BQ86TV6 843 aa18.54■□□□□ 0.56
CAPN3-209ENST00000466222 SPNS2Q8IVW8 549 aa18.54■□□□□ 0.56
CAPN3-209ENST00000466222 SCRN2Q96FV2 425 aa18.54■□□□□ 0.56
CAPN3-209ENST00000466222 GPR63Q9BZJ6 419 aa18.54■□□□□ 0.56
CAPN3-209ENST00000466222 TAGLN3Q9UI15 199 aa18.54■□□□□ 0.56
CAPN3-209ENST00000466222 CCDC162PA2VCL2 907 aa18.53■□□□□ 0.56
CAPN3-209ENST00000466222 CAPN8A6NHC0 703 aa18.53■□□□□ 0.56
CAPN3-209ENST00000466222 C2orf81A6NN90 581 aa18.53■□□□□ 0.56
CAPN3-209ENST00000466222 C16orf96A6NNT2 1141 aa18.53■□□□□ 0.56
CAPN3-209ENST00000466222 F8W8V4 182 aa18.53■□□□□ 0.56
CAPN3-209ENST00000466222 PAPSS2O95340 614 aaPredicted RBP18.53■□□□□ 0.56
CAPN3-209ENST00000466222 GOT2P00505 430 aaKnown RBP18.53■□□□□ 0.56
CAPN3-209ENST00000466222 SRFP11831 508 aa18.53■□□□□ 0.56
CAPN3-209ENST00000466222 GABRB3P28472 473 aa18.53■□□□□ 0.56
CAPN3-209ENST00000466222 RPL26P61254 145 aaKnown RBP18.53■□□□□ 0.56
CAPN3-209ENST00000466222 MPP1Q00013 466 aa18.53■□□□□ 0.56
CAPN3-209ENST00000466222 ENPP2Q13822 863 aa18.53■□□□□ 0.56
CAPN3-209ENST00000466222 ELAVL3Q14576 367 aaKnown RBP18.53■□□□□ 0.56
CAPN3-209ENST00000466222 CCDC6Q16204 474 aa18.53■□□□□ 0.56
CAPN3-209ENST00000466222 INSCQ1MX18 579 aa18.53■□□□□ 0.56
CAPN3-209ENST00000466222 ZNF805Q5CZA5 627 aa18.53■□□□□ 0.56
CAPN3-209ENST00000466222 PACS1Q6VY07 963 aa18.53■□□□□ 0.56
CAPN3-209ENST00000466222 PARS2Q7L3T8 475 aaKnown RBP18.53■□□□□ 0.56
CAPN3-209ENST00000466222 APLFQ8IW19 511 aaPredicted RBP18.53■□□□□ 0.56
CAPN3-209ENST00000466222 IL17RCQ8NAC3 791 aa18.53■□□□□ 0.56
CAPN3-209ENST00000466222 ACVR1CQ8NER5 493 aa18.53■□□□□ 0.56
CAPN3-209ENST00000466222 PIP4K2CQ8TBX8 421 aa18.53■□□□□ 0.56
CAPN3-209ENST00000466222 DNASE1L2Q92874 299 aa18.53■□□□□ 0.56
CAPN3-209ENST00000466222 CDKN2AIPNLQ96HQ2 116 aa18.53■□□□□ 0.56
CAPN3-209ENST00000466222 MECRQ9BV79 373 aa18.53■□□□□ 0.56
CAPN3-209ENST00000466222 C8orf33Q9H7E9 229 aaPredicted RBP18.53■□□□□ 0.56
CAPN3-209ENST00000466222 ZFYVE1Q9HBF4 777 aa18.53■□□□□ 0.56
CAPN3-209ENST00000466222 B4GALT6Q9UBX8 382 aa18.53■□□□□ 0.56
CAPN3-209ENST00000466222 DCDC2Q9UHG0 476 aa18.53■□□□□ 0.56
CAPN3-209ENST00000466222 ITM2BQ9Y287 266 aa18.53■□□□□ 0.56
CAPN3-209ENST00000466222 ADAM23O75077 832 aa18.53■□□□□ 0.56
CAPN3-209ENST00000466222 SERPINA6P08185 405 aa18.53■□□□□ 0.56
CAPN3-209ENST00000466222 LPOP22079 712 aaPredicted RBP18.53■□□□□ 0.56
CAPN3-209ENST00000466222 CDKN1CP49918 316 aaPredicted RBP18.53■□□□□ 0.56
CAPN3-209ENST00000466222 PGGT1BP53609 377 aa18.53■□□□□ 0.56
CAPN3-209ENST00000466222 PRAMEP78395 509 aa18.53■□□□□ 0.56
CAPN3-209ENST00000466222 ACVR1Q04771 509 aa18.53■□□□□ 0.56
CAPN3-209ENST00000466222 GRM3Q14832 879 aa18.53■□□□□ 0.56
CAPN3-209ENST00000466222 KHDC1Q4VXA5 237 aaKnown RBP18.53■□□□□ 0.56
CAPN3-209ENST00000466222 ZNF789Q5FWF6 425 aa18.53■□□□□ 0.56
CAPN3-209ENST00000466222 MROH9Q5TGP6 573 aa18.53■□□□□ 0.56
CAPN3-209ENST00000466222 LRRC66Q68CR7 880 aa18.53■□□□□ 0.56
CAPN3-209ENST00000466222 PDPK2PQ6A1A2 396 aa18.53■□□□□ 0.56
CAPN3-209ENST00000466222 TPRG1Q6ZUI0 275 aa18.53■□□□□ 0.56
CAPN3-209ENST00000466222 STRA8Q7Z7C7 330 aa18.53■□□□□ 0.56
CAPN3-209ENST00000466222 STYXQ8WUJ0 223 aa18.53■□□□□ 0.56
CAPN3-209ENST00000466222 DNAJC9Q8WXX5 260 aa18.53■□□□□ 0.56
CAPN3-209ENST00000466222 OR8D1Q8WZ84 308 aa18.53■□□□□ 0.56
CAPN3-209ENST00000466222 STMN2Q93045 179 aa18.53■□□□□ 0.56
CAPN3-209ENST00000466222 ARRDC3Q96B67 414 aa18.53■□□□□ 0.56
CAPN3-209ENST00000466222 SLC6A17Q9H1V8 727 aa18.53■□□□□ 0.56
CAPN3-209ENST00000466222 NLE1Q9NVX2 485 aaPredicted RBP18.53■□□□□ 0.56
CAPN3-209ENST00000466222 IL17CQ9P0M4 197 aa18.53■□□□□ 0.56
CAPN3-209ENST00000466222 FKBPLQ9UIM3 349 aa18.53■□□□□ 0.56
CAPN3-209ENST00000466222 CORO1CQ9ULV4 474 aaPredicted RBP18.53■□□□□ 0.56
CAPN3-209ENST00000466222 PPIL1Q9Y3C6 166 aa18.53■□□□□ 0.56
CAPN3-209ENST00000466222 F5P12259 2224 aa18.52■□□□□ 0.56
CAPN3-209ENST00000466222 PSMG1O95456 288 aa18.52■□□□□ 0.56
CAPN3-209ENST00000466222 PAMP19021 973 aa18.52■□□□□ 0.56
CAPN3-209ENST00000466222 PGM1P36871 562 aa18.52■□□□□ 0.56
CAPN3-209ENST00000466222 SLC1A2P43004 574 aa18.52■□□□□ 0.56
CAPN3-209ENST00000466222 PTSQ03393 145 aa18.52■□□□□ 0.56
CAPN3-209ENST00000466222 GRSF1Q12849 480 aaKnown RBP eCLIP18.52■□□□□ 0.56
CAPN3-209ENST00000466222 FRG1Q14331 258 aaKnown RBP18.52■□□□□ 0.56
CAPN3-209ENST00000466222 C6orf163Q5TEZ5 329 aa18.52■□□□□ 0.56
CAPN3-209ENST00000466222 ZNF470Q6ECI4 717 aa18.52■□□□□ 0.56
CAPN3-209ENST00000466222 NEPROQ6NW34 567 aa18.52■□□□□ 0.56
CAPN3-209ENST00000466222 ALYREFQ86V81 257 aaKnown RBP18.52■□□□□ 0.56
CAPN3-209ENST00000466222 WDR75Q8IWA0 830 aaKnown RBP18.52■□□□□ 0.56
CAPN3-209ENST00000466222 TXNDC5Q8NBS9 432 aaKnown RBP18.52■□□□□ 0.56
CAPN3-209ENST00000466222 PRR11Q96HE9 360 aaPredicted RBP18.52■□□□□ 0.56
CAPN3-209ENST00000466222 MCCC1Q96RQ3 725 aaPredicted RBP18.52■□□□□ 0.56
CAPN3-209ENST00000466222 C1orf21Q9H246 121 aa18.52■□□□□ 0.56
CAPN3-209ENST00000466222 PCDH12Q9NPG4 1184 aa18.52■□□□□ 0.56
CAPN3-209ENST00000466222 NDRG2Q9UN36 371 aaKnown RBP18.52■□□□□ 0.56
CAPN3-209ENST00000466222 H0Y3Z8 333 aa18.51■□□□□ 0.55
CAPN3-209ENST00000466222 STX7O15400 261 aaKnown RBP18.51■□□□□ 0.55
CAPN3-209ENST00000466222 RPP40O75818 363 aaKnown RBP18.51■□□□□ 0.55
CAPN3-209ENST00000466222 SMNDC1O75940 238 aaKnown RBP eCLIP18.51■□□□□ 0.55
CAPN3-209ENST00000466222 AHSGP02765 367 aa18.51■□□□□ 0.55
CAPN3-209ENST00000466222 HMGCLP35914 325 aa18.51■□□□□ 0.55
CAPN3-209ENST00000466222 SLC34A1Q06495 639 aa18.51■□□□□ 0.55
CAPN3-209ENST00000466222 THOC5Q13769 683 aaKnown RBP18.51■□□□□ 0.55
CAPN3-209ENST00000466222 SEMA3AQ14563 771 aa18.51■□□□□ 0.55
CAPN3-209ENST00000466222 BRAT1Q6PJG6 821 aa18.51■□□□□ 0.55
CAPN3-209ENST00000466222 PPP1R14CQ8TAE6 165 aa18.51■□□□□ 0.55
CAPN3-209ENST00000466222 FAM3CQ92520 227 aa18.51■□□□□ 0.55
CAPN3-209ENST00000466222 STX18Q9P2W9 335 aaKnown RBP18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms