RNA–Protein interactions for RNA: ENST00000465563.5

SMC4-205, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 747 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-205ENST00000465563 IRX1P78414 480 aaPredicted RBP4.7□□□□□ -1.66
SMC4-205ENST00000465563 GRIK2Q13002 908 aa4.7□□□□□ -1.66
SMC4-205ENST00000465563 OS9Q13438 667 aaPredicted RBP4.7□□□□□ -1.66
SMC4-205ENST00000465563 LPAL2Q16609 132 aa4.7□□□□□ -1.66
SMC4-205ENST00000465563 DECR1Q16698 335 aa4.7□□□□□ -1.66
SMC4-205ENST00000465563 USP41Q3LFD5 358 aa4.7□□□□□ -1.66
SMC4-205ENST00000465563 TECRLQ5HYJ1 363 aa4.7□□□□□ -1.66
SMC4-205ENST00000465563 DCST1Q5T197 706 aa4.7□□□□□ -1.66
SMC4-205ENST00000465563 CACNA2D4Q7Z3S7 1137 aa4.7□□□□□ -1.66
SMC4-205ENST00000465563 MAP7D3Q8IWC1 876 aa4.7□□□□□ -1.66
SMC4-205ENST00000465563 NKAPQ8N5F7 415 aaKnown RBP4.7□□□□□ -1.66
SMC4-205ENST00000465563 ZSCAN31Q96LW9 406 aaPredicted RBP4.7□□□□□ -1.66
SMC4-205ENST00000465563 MPHOSPH8Q99549 860 aa4.7□□□□□ -1.66
SMC4-205ENST00000465563 ACSS1Q9NUB1 689 aaPredicted RBP4.7□□□□□ -1.66
SMC4-205ENST00000465563 PCDHGB3Q9Y5G1 929 aa4.7□□□□□ -1.66
SMC4-205ENST00000465563 RNF215Q9Y6U7 377 aa4.7□□□□□ -1.66
SMC4-205ENST00000465563 TP53BP1Q12888 1972 aaPredicted RBP4.7□□□□□ -1.66
SMC4-205ENST00000465563 USP17L23D6RBM5 183 aa4.69□□□□□ -1.66
SMC4-205ENST00000465563 VCYO14598 125 aa4.69□□□□□ -1.66
SMC4-205ENST00000465563 NBNO60934 754 aa4.69□□□□□ -1.66
SMC4-205ENST00000465563 ZNF10P21506 573 aaPredicted RBP4.69□□□□□ -1.66
SMC4-205ENST00000465563 HOXC8P31273 242 aa4.69□□□□□ -1.66
SMC4-205ENST00000465563 CAMK1Q14012 370 aa4.69□□□□□ -1.66
SMC4-205ENST00000465563 MYLK3Q32MK0 819 aa4.69□□□□□ -1.66
SMC4-205ENST00000465563 C6orf141Q5SZD1 244 aa4.69□□□□□ -1.66
SMC4-205ENST00000465563 NAA35Q5VZE5 725 aa4.69□□□□□ -1.66
SMC4-205ENST00000465563 FAM53AQ6NSI3 398 aaPredicted RBP4.69□□□□□ -1.66
SMC4-205ENST00000465563 RBMS3Q6XE24 437 aaKnown RBP4.69□□□□□ -1.66
SMC4-205ENST00000465563 PLEKHM3Q6ZWE6 761 aa4.69□□□□□ -1.66
SMC4-205ENST00000465563 NOL8Q76FK4 1167 aaKnown RBP4.69□□□□□ -1.66
SMC4-205ENST00000465563 ADSSL1Q8N142 457 aa4.69□□□□□ -1.66
SMC4-205ENST00000465563 FCAMRQ8WWV6 532 aa4.69□□□□□ -1.66
SMC4-205ENST00000465563 HERVK_113Q902F9 699 aa4.69□□□□□ -1.66
SMC4-205ENST00000465563 ARHGEF26Q96DR7 871 aa4.69□□□□□ -1.66
SMC4-205ENST00000465563 ISCA1Q9BUE6 129 aa4.69□□□□□ -1.66
SMC4-205ENST00000465563 MARCH4Q9P2E8 410 aaPredicted RBP4.69□□□□□ -1.66
SMC4-205ENST00000465563 AAR2Q9Y312 384 aaKnown RBP4.69□□□□□ -1.66
SMC4-205ENST00000465563 IFIT1P09914 478 aaKnown RBP4.68□□□□□ -1.66
SMC4-205ENST00000465563 CSF2RAP15509 400 aa4.68□□□□□ -1.66
SMC4-205ENST00000465563 C18orf63Q68DL7 685 aa4.68□□□□□ -1.66
SMC4-205ENST00000465563 NRROSQ86YC3 692 aa4.68□□□□□ -1.66
SMC4-205ENST00000465563 CPOQ8IVL8 374 aa4.68□□□□□ -1.66
SMC4-205ENST00000465563 APBB2Q92870 758 aa4.68□□□□□ -1.66
SMC4-205ENST00000465563 TRIM63Q969Q1 353 aa4.68□□□□□ -1.66
SMC4-205ENST00000465563 FUZQ9BT04 418 aa4.68□□□□□ -1.66
SMC4-205ENST00000465563 BICC1Q9H694 974 aaKnown RBP4.68□□□□□ -1.66
SMC4-205ENST00000465563 TCP11L1Q9NUJ3 509 aa4.68□□□□□ -1.66
SMC4-205ENST00000465563 PPP1R14DQ9NXH3 145 aa4.68□□□□□ -1.66
SMC4-205ENST00000465563 MPP6Q9NZW5 540 aa4.68□□□□□ -1.66
SMC4-205ENST00000465563 TNPO2O14787 897 aaKnown RBP4.67□□□□□ -1.66
SMC4-205ENST00000465563 HS3ST1O14792 307 aa4.67□□□□□ -1.66
SMC4-205ENST00000465563 CDAP32320 146 aa4.67□□□□□ -1.66
SMC4-205ENST00000465563 MLLT10P55197 1068 aa4.67□□□□□ -1.66
SMC4-205ENST00000465563 RUNX1T1Q06455 604 aa4.67□□□□□ -1.66
SMC4-205ENST00000465563 SLC9B1Q4ZJI4 515 aa4.67□□□□□ -1.66
SMC4-205ENST00000465563 DNAAF4Q8WXU2 420 aa4.67□□□□□ -1.66
SMC4-205ENST00000465563 ART5Q96L15 291 aa4.67□□□□□ -1.66
SMC4-205ENST00000465563 NEUROD6Q96NK8 337 aa4.67□□□□□ -1.66
SMC4-205ENST00000465563 ATOH8Q96SQ7 321 aa4.67□□□□□ -1.66
SMC4-205ENST00000465563 TMEM47Q9BQJ4 181 aa4.67□□□□□ -1.66
SMC4-205ENST00000465563 DCTN5Q9BTE1 182 aa4.67□□□□□ -1.66
SMC4-205ENST00000465563 UBXN6Q9BZV1 441 aa4.67□□□□□ -1.66
SMC4-205ENST00000465563 LRMDAQ9H2I8 198 aa4.67□□□□□ -1.66
SMC4-205ENST00000465563 KRTAP16-1A8MUX0 517 aa4.66□□□□□ -1.66
SMC4-205ENST00000465563 TCEA3O75764 348 aa4.66□□□□□ -1.66
SMC4-205ENST00000465563 CD48P09326 243 aa4.66□□□□□ -1.66
SMC4-205ENST00000465563 ZNF26P17031 533 aaPredicted RBP4.66□□□□□ -1.66
SMC4-205ENST00000465563 HOXA13P31271 388 aaPredicted RBP4.66□□□□□ -1.66
SMC4-205ENST00000465563 CLK1P49759 484 aaKnown RBP4.66□□□□□ -1.66
SMC4-205ENST00000465563 CLDN20P56880 219 aa4.66□□□□□ -1.66
SMC4-205ENST00000465563 COG7P83436 770 aa4.66□□□□□ -1.66
SMC4-205ENST00000465563 ACVR2BQ13705 512 aa4.66□□□□□ -1.66
SMC4-205ENST00000465563 ITGA9Q13797 1035 aa4.66□□□□□ -1.66
SMC4-205ENST00000465563 DRAP1Q14919 205 aaPredicted RBP4.66□□□□□ -1.66
SMC4-205ENST00000465563 ZC2HC1CQ53FD0 456 aaPredicted RBP4.66□□□□□ -1.66
SMC4-205ENST00000465563 KLHL29Q96CT2 875 aa4.66□□□□□ -1.66
SMC4-205ENST00000465563 KIF1BPQ96EK5 621 aa4.66□□□□□ -1.66
SMC4-205ENST00000465563 ABHD8Q96I13 439 aa4.66□□□□□ -1.66
SMC4-205ENST00000465563 LINC00479Q96M42 142 aa4.66□□□□□ -1.66
SMC4-205ENST00000465563 PCGF1Q9BSM1 259 aa4.66□□□□□ -1.66
SMC4-205ENST00000465563 GPR63Q9BZJ6 419 aa4.66□□□□□ -1.66
SMC4-205ENST00000465563 CACNA1FO60840 1977 aa4.65□□□□□ -1.66
SMC4-205ENST00000465563 A0A1W2PPI3 338 aa4.65□□□□□ -1.67
SMC4-205ENST00000465563 LRRC53A6NM62 1247 aa4.65□□□□□ -1.67
SMC4-205ENST00000465563 ZNF821O75541 412 aaPredicted RBP4.65□□□□□ -1.67
SMC4-205ENST00000465563 PDE9AO76083 593 aa4.65□□□□□ -1.67
SMC4-205ENST00000465563 RHBDL3P58872 404 aa4.65□□□□□ -1.67
SMC4-205ENST00000465563 LMO4P61968 165 aa4.65□□□□□ -1.67
SMC4-205ENST00000465563 PPFIA1Q13136 1202 aa4.65□□□□□ -1.67
SMC4-205ENST00000465563 MAD2L1Q13257 205 aaPredicted RBP4.65□□□□□ -1.67
SMC4-205ENST00000465563 KIR2DS3Q14952 304 aa4.65□□□□□ -1.67
SMC4-205ENST00000465563 COL28A1Q2UY09 1125 aa4.65□□□□□ -1.67
SMC4-205ENST00000465563 PIWIL4Q7Z3Z4 852 aaKnown RBP4.65□□□□□ -1.67
SMC4-205ENST00000465563 SLC44A1Q8WWI5 657 aa4.65□□□□□ -1.67
SMC4-205ENST00000465563 ZBTB10Q96DT7 871 aa4.65□□□□□ -1.67
SMC4-205ENST00000465563 ACOX2Q99424 681 aa4.65□□□□□ -1.67
SMC4-205ENST00000465563 OPRPNQ99935 248 aaPredicted RBP4.65□□□□□ -1.67
SMC4-205ENST00000465563 EGFL8Q99944 293 aa4.65□□□□□ -1.67
SMC4-205ENST00000465563 USP44Q9H0E7 712 aa4.65□□□□□ -1.67
SMC4-205ENST00000465563 PDZD7Q9H5P4 517 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms