RNA–Protein interactions for RNA: ENST00000465238.5

COL7A1-205, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-205ENST00000465238 AGERQ15109 404 aa17.65■□□□□ 0.42
COL7A1-205ENST00000465238 IRF4Q15306 451 aa17.65■□□□□ 0.42
COL7A1-205ENST00000465238 LRRC66Q68CR7 880 aa17.65■□□□□ 0.42
COL7A1-205ENST00000465238 SLC35F3Q8IY50 421 aa17.65■□□□□ 0.42
COL7A1-205ENST00000465238 FSTL5Q8N475 847 aaPredicted RBP17.65■□□□□ 0.42
COL7A1-205ENST00000465238 TAB3Q8N5C8 712 aaPredicted RBP17.65■□□□□ 0.42
COL7A1-205ENST00000465238 ATL2Q8NHH9 583 aa17.65■□□□□ 0.42
COL7A1-205ENST00000465238 WDR48Q8TAF3 677 aa17.65■□□□□ 0.42
COL7A1-205ENST00000465238 CCHCR1Q8TD31 782 aa17.65■□□□□ 0.42
COL7A1-205ENST00000465238 HIC2Q96JB3 615 aa17.65■□□□□ 0.42
COL7A1-205ENST00000465238 CAPZA3Q96KX2 299 aa17.65■□□□□ 0.42
COL7A1-205ENST00000465238 COQ10AQ96MF6 247 aa17.65■□□□□ 0.42
COL7A1-205ENST00000465238 GORASP1Q9BQQ3 440 aa17.65■□□□□ 0.42
COL7A1-205ENST00000465238 FICDQ9BVA6 458 aa17.65■□□□□ 0.42
COL7A1-205ENST00000465238 MAGEE1Q9HCI5 957 aa17.65■□□□□ 0.42
COL7A1-205ENST00000465238 PAK5Q9P286 719 aa17.65■□□□□ 0.42
COL7A1-205ENST00000465238 PNMA8BQ9ULN7 279 aaPredicted RBP17.65■□□□□ 0.42
COL7A1-205ENST00000465238 COL27A1Q8IZC6 1860 aaPredicted RBP17.65■□□□□ 0.42
COL7A1-205ENST00000465238 C1orf232A0A0U1RR37 186 aa17.64■□□□□ 0.41
COL7A1-205ENST00000465238 YY2O15391 372 aa17.64■□□□□ 0.41
COL7A1-205ENST00000465238 TCEA3O75764 348 aa17.64■□□□□ 0.41
COL7A1-205ENST00000465238 CLDN7O95471 211 aa17.64■□□□□ 0.41
COL7A1-205ENST00000465238 AGTP01019 485 aa17.64■□□□□ 0.41
COL7A1-205ENST00000465238 PIRTP0C851 137 aa17.64■□□□□ 0.41
COL7A1-205ENST00000465238 TSHRP16473 764 aa17.64■□□□□ 0.41
COL7A1-205ENST00000465238 FDFT1P37268 417 aa17.64■□□□□ 0.41
COL7A1-205ENST00000465238 PAFAH1B1P43034 410 aa17.64■□□□□ 0.41
COL7A1-205ENST00000465238 SLC1A5Q15758 541 aa17.64■□□□□ 0.41
COL7A1-205ENST00000465238 WSCD2Q2TBF2 565 aa17.64■□□□□ 0.41
COL7A1-205ENST00000465238 SIRPB2Q5JXA9 342 aa17.64■□□□□ 0.41
COL7A1-205ENST00000465238 ESRP1Q6NXG1 681 aaKnown RBP17.64■□□□□ 0.41
COL7A1-205ENST00000465238 IGF2-ASQ6U949 168 aa17.64■□□□□ 0.41
COL7A1-205ENST00000465238 C4orf22Q6V702 233 aa17.64■□□□□ 0.41
COL7A1-205ENST00000465238 SYT10Q6XYQ8 523 aa17.64■□□□□ 0.41
COL7A1-205ENST00000465238 RBM44Q6ZP01 1051 aaKnown RBP17.64■□□□□ 0.41
COL7A1-205ENST00000465238 GPR155Q7Z3F1 870 aa17.64■□□□□ 0.41
COL7A1-205ENST00000465238 HSD11B1LQ7Z5J1 315 aa17.64■□□□□ 0.41
COL7A1-205ENST00000465238 CBARPQ8N350 705 aaPredicted RBP17.64■□□□□ 0.41
COL7A1-205ENST00000465238 LSM14AQ8ND56 463 aaKnown RBP17.64■□□□□ 0.41
COL7A1-205ENST00000465238 CLPBQ9H078 707 aa17.64■□□□□ 0.41
COL7A1-205ENST00000465238 THSD1Q9NS62 852 aa17.64■□□□□ 0.41
COL7A1-205ENST00000465238 HELZ2Q9BYK8 2649 aaKnown RBP17.64■□□□□ 0.41
COL7A1-205ENST00000465238 A0A0U1RQS6 177 aa17.63■□□□□ 0.41
COL7A1-205ENST00000465238 TEX51A0A1B0GUA7 166 aa17.63■□□□□ 0.41
COL7A1-205ENST00000465238 ATXN7O15265 892 aaPredicted RBP17.63■□□□□ 0.41
COL7A1-205ENST00000465238 FGF1P05230 155 aa17.63■□□□□ 0.41
COL7A1-205ENST00000465238 ETS1P14921 441 aa17.63■□□□□ 0.41
COL7A1-205ENST00000465238 HTR1BP28222 390 aa17.63■□□□□ 0.41
COL7A1-205ENST00000465238 RPL22P35268 128 aaKnown RBP17.63■□□□□ 0.41
COL7A1-205ENST00000465238 COILP38432 576 aaPredicted RBP17.63■□□□□ 0.41
COL7A1-205ENST00000465238 ETV3P41162 512 aa17.63■□□□□ 0.41
COL7A1-205ENST00000465238 CHRNA4P43681 627 aa17.63■□□□□ 0.41
COL7A1-205ENST00000465238 LMAN1P49257 510 aa17.63■□□□□ 0.41
COL7A1-205ENST00000465238 HK3P52790 923 aa17.63■□□□□ 0.41
COL7A1-205ENST00000465238 PTSQ03393 145 aa17.63■□□□□ 0.41
COL7A1-205ENST00000465238 ELOCQ15369 112 aa17.63■□□□□ 0.41
COL7A1-205ENST00000465238 CYP1B1Q16678 543 aa17.63■□□□□ 0.41
COL7A1-205ENST00000465238 PERM1Q5SV97 790 aa17.63■□□□□ 0.41
COL7A1-205ENST00000465238 LVRNQ6Q4G3 990 aa17.63■□□□□ 0.41
COL7A1-205ENST00000465238 Q6ZVL8 140 aa17.63■□□□□ 0.41
COL7A1-205ENST00000465238 PRUNE1Q86TP1 453 aa17.63■□□□□ 0.41
COL7A1-205ENST00000465238 SDR16C5Q8N3Y7 309 aa17.63■□□□□ 0.41
COL7A1-205ENST00000465238 SCG3Q8WXD2 468 aaKnown RBP17.63■□□□□ 0.41
COL7A1-205ENST00000465238 NUS1Q96E22 293 aa17.63■□□□□ 0.41
COL7A1-205ENST00000465238 TBL1YQ9BQ87 522 aa17.63■□□□□ 0.41
COL7A1-205ENST00000465238 APOL2Q9BQE5 337 aa17.63■□□□□ 0.41
COL7A1-205ENST00000465238 GPR63Q9BZJ6 419 aa17.63■□□□□ 0.41
COL7A1-205ENST00000465238 LRRC40Q9H9A6 602 aa17.63■□□□□ 0.41
COL7A1-205ENST00000465238 ZFYVE1Q9HBF4 777 aa17.63■□□□□ 0.41
COL7A1-205ENST00000465238 ASCL3Q9NQ33 180 aa17.63■□□□□ 0.41
COL7A1-205ENST00000465238 HACD3Q9P035 362 aa17.63■□□□□ 0.41
COL7A1-205ENST00000465238 RNF14Q9UBS8 474 aa17.63■□□□□ 0.41
COL7A1-205ENST00000465238 FEZ2Q9UHY8 353 aaPredicted RBP17.63■□□□□ 0.41
COL7A1-205ENST00000465238 DOLKQ9UPQ8 538 aa17.63■□□□□ 0.41
COL7A1-205ENST00000465238 SHOC2Q9UQ13 582 aa17.63■□□□□ 0.41
COL7A1-205ENST00000465238 ZNF711Q9Y462 761 aa17.63■□□□□ 0.41
COL7A1-205ENST00000465238 E7EVH7 732 aa17.62■□□□□ 0.41
COL7A1-205ENST00000465238 PHF2O75151 1096 aa17.62■□□□□ 0.41
COL7A1-205ENST00000465238 RASGRP1O95267 797 aa17.62■□□□□ 0.41
COL7A1-205ENST00000465238 PCCBP05166 539 aa17.62■□□□□ 0.41
COL7A1-205ENST00000465238 ZSCAN5DPP0CG00 497 aa17.62■□□□□ 0.41
COL7A1-205ENST00000465238 CTSEP14091 401 aa17.62■□□□□ 0.41
COL7A1-205ENST00000465238 GM2AP17900 193 aa17.62■□□□□ 0.41
COL7A1-205ENST00000465238 ADRA1AP35348 466 aa17.62■□□□□ 0.41
COL7A1-205ENST00000465238 STC1P52823 247 aa17.62■□□□□ 0.41
COL7A1-205ENST00000465238 UCNP55089 124 aa17.62■□□□□ 0.41
COL7A1-205ENST00000465238 SPARCL1Q14515 664 aa17.62■□□□□ 0.41
COL7A1-205ENST00000465238 NFATC4Q14934 902 aa17.62■□□□□ 0.41
COL7A1-205ENST00000465238 C3orf38Q5JPI3 329 aa17.62■□□□□ 0.41
COL7A1-205ENST00000465238 BROXQ5VW32 411 aa17.62■□□□□ 0.41
COL7A1-205ENST00000465238 TTC27Q6P3X3 843 aa17.62■□□□□ 0.41
COL7A1-205ENST00000465238 CCDC137Q6PK04 289 aaKnown RBP17.62■□□□□ 0.41
COL7A1-205ENST00000465238 RANBP10Q6VN20 620 aa17.62■□□□□ 0.41
COL7A1-205ENST00000465238 LYSMD3Q7Z3D4 306 aa17.62■□□□□ 0.41
COL7A1-205ENST00000465238 TECPR1Q7Z6L1 1165 aa17.62■□□□□ 0.41
COL7A1-205ENST00000465238 CREG2Q8IUH2 290 aa17.62■□□□□ 0.41
COL7A1-205ENST00000465238 HID1Q8IV36 788 aa17.62■□□□□ 0.41
COL7A1-205ENST00000465238 RAVER1Q8IY67 606 aaKnown RBP17.62■□□□□ 0.41
COL7A1-205ENST00000465238 GLIS1Q8NBF1 620 aa17.62■□□□□ 0.41
COL7A1-205ENST00000465238 SLC39A7Q92504 469 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms