RNA–Protein interactions for RNA: ENST00000465229.5

EXOSC3-203, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-203ENST00000465229 DNAJC3Q13217 504 aa16.85■□□□□ 0.29
EXOSC3-203ENST00000465229 PDK4Q16654 411 aa16.85■□□□□ 0.29
EXOSC3-203ENST00000465229 SEL1L3Q68CR1 1132 aa16.85■□□□□ 0.29
EXOSC3-203ENST00000465229 Q6ZVL8 140 aa16.85■□□□□ 0.29
EXOSC3-203ENST00000465229 MARK2Q7KZI7 788 aaKnown RBP16.85■□□□□ 0.29
EXOSC3-203ENST00000465229 TECPR1Q7Z6L1 1165 aa16.85■□□□□ 0.29
EXOSC3-203ENST00000465229 CTAGE3PQ8IX95 158 aa16.85■□□□□ 0.29
EXOSC3-203ENST00000465229 OR13J1Q8NGT2 312 aa16.85■□□□□ 0.29
EXOSC3-203ENST00000465229 OR2T34Q8NGX1 318 aa16.85■□□□□ 0.29
EXOSC3-203ENST00000465229 GDAP1Q8TB36 358 aa16.85■□□□□ 0.29
EXOSC3-203ENST00000465229 DNAJC1Q96KC8 554 aaKnown RBP16.85■□□□□ 0.29
EXOSC3-203ENST00000465229 COQ10AQ96MF6 247 aa16.85■□□□□ 0.29
EXOSC3-203ENST00000465229 NLE1Q9NVX2 485 aaPredicted RBP16.85■□□□□ 0.29
EXOSC3-203ENST00000465229 MKS1Q9NXB0 559 aa16.85■□□□□ 0.29
EXOSC3-203ENST00000465229 INVSQ9Y283 1065 aa16.85■□□□□ 0.29
EXOSC3-203ENST00000465229 PKP3Q9Y446 797 aa16.85■□□□□ 0.29
EXOSC3-203ENST00000465229 RPS6KL1Q9Y6S9 549 aa16.85■□□□□ 0.29
EXOSC3-203ENST00000465229 GON4LQ3T8J9 2241 aa16.85■□□□□ 0.29
EXOSC3-203ENST00000465229 ZCWPW2A0A1B0GU75 182 aa16.85■□□□□ 0.29
EXOSC3-203ENST00000465229 A0A1W2PQU0 124 aa16.85■□□□□ 0.29
EXOSC3-203ENST00000465229 LRRC72A6NJI9 287 aa16.85■□□□□ 0.29
EXOSC3-203ENST00000465229 CXorf49A8MYA2 514 aaPredicted RBP16.85■□□□□ 0.29
EXOSC3-203ENST00000465229 C10orf142B7Z368 130 aa16.85■□□□□ 0.29
EXOSC3-203ENST00000465229 SNX3O60493 162 aa16.85■□□□□ 0.29
EXOSC3-203ENST00000465229 RNGTTO60942 597 aaKnown RBP16.85■□□□□ 0.29
EXOSC3-203ENST00000465229 SEMA4FO95754 770 aa16.85■□□□□ 0.29
EXOSC3-203ENST00000465229 POLBP06746 335 aa16.85■□□□□ 0.29
EXOSC3-203ENST00000465229 BPIP17213 487 aa16.85■□□□□ 0.29
EXOSC3-203ENST00000465229 ETV3P41162 512 aa16.85■□□□□ 0.29
EXOSC3-203ENST00000465229 SPINT3P49223 89 aa16.85■□□□□ 0.29
EXOSC3-203ENST00000465229 FNTBP49356 437 aa16.85■□□□□ 0.29
EXOSC3-203ENST00000465229 ARSDP51689 593 aa16.85■□□□□ 0.29
EXOSC3-203ENST00000465229 RPS21P63220 83 aaKnown RBP16.85■□□□□ 0.29
EXOSC3-203ENST00000465229 TMPRSS15P98073 1019 aa16.85■□□□□ 0.29
EXOSC3-203ENST00000465229 CREB5Q02930 508 aa16.85■□□□□ 0.29
EXOSC3-203ENST00000465229 ACVR1Q04771 509 aa16.85■□□□□ 0.29
EXOSC3-203ENST00000465229 ACOX1Q15067 660 aa16.85■□□□□ 0.29
EXOSC3-203ENST00000465229 TMEM259Q4ZIN3 620 aa16.85■□□□□ 0.29
EXOSC3-203ENST00000465229 USP39Q53GS9 565 aaKnown RBP16.85■□□□□ 0.29
EXOSC3-203ENST00000465229 SPANXN3Q5MJ09 141 aa16.85■□□□□ 0.29
EXOSC3-203ENST00000465229 HHATQ5VTY9 493 aa16.85■□□□□ 0.29
EXOSC3-203ENST00000465229 TIFABQ6ZNK6 161 aa16.85■□□□□ 0.29
EXOSC3-203ENST00000465229 HORMAD1Q86X24 394 aa16.85■□□□□ 0.29
EXOSC3-203ENST00000465229 CDKL2Q92772 493 aa16.85■□□□□ 0.29
EXOSC3-203ENST00000465229 PEX13Q92968 403 aa16.85■□□□□ 0.29
EXOSC3-203ENST00000465229 APOPT1Q96IL0 206 aa16.85■□□□□ 0.29
EXOSC3-203ENST00000465229 C19orf43Q9BQ61 176 aa16.85■□□□□ 0.29
EXOSC3-203ENST00000465229 PLCD4Q9BRC7 762 aa16.85■□□□□ 0.29
EXOSC3-203ENST00000465229 MLXIPLQ9NP71 852 aa16.85■□□□□ 0.29
EXOSC3-203ENST00000465229 SMYD2Q9NRG4 433 aa16.85■□□□□ 0.29
EXOSC3-203ENST00000465229 COQ6Q9Y2Z9 468 aa16.85■□□□□ 0.29
EXOSC3-203ENST00000465229 TRPM6Q9BX84 2022 aa16.84■□□□□ 0.29
EXOSC3-203ENST00000465229 WDFY4Q6ZS81 3184 aa16.84■□□□□ 0.29
EXOSC3-203ENST00000465229 CCL22O00626 93 aa16.84■□□□□ 0.29
EXOSC3-203ENST00000465229 LZTS3O60299 673 aaPredicted RBP16.84■□□□□ 0.29
EXOSC3-203ENST00000465229 GPR37L1O60883 481 aa16.84■□□□□ 0.29
EXOSC3-203ENST00000465229 PIAS1O75925 651 aa16.84■□□□□ 0.29
EXOSC3-203ENST00000465229 RECQL5O94762 991 aaPredicted RBP16.84■□□□□ 0.29
EXOSC3-203ENST00000465229 USP1O94782 785 aa16.84■□□□□ 0.29
EXOSC3-203ENST00000465229 PPP2CBP62714 309 aa16.84■□□□□ 0.29
EXOSC3-203ENST00000465229 PPP2CAP67775 309 aa16.84■□□□□ 0.29
EXOSC3-203ENST00000465229 CRYMQ14894 314 aa16.84■□□□□ 0.29
EXOSC3-203ENST00000465229 KIAA1161Q6NSJ0 714 aa16.84■□□□□ 0.29
EXOSC3-203ENST00000465229 TRMT10BQ6PF06 316 aaKnown RBP16.84■□□□□ 0.29
EXOSC3-203ENST00000465229 RAVER1Q8IY67 606 aaKnown RBP16.84■□□□□ 0.29
EXOSC3-203ENST00000465229 GPR26Q8NDV2 337 aa16.84■□□□□ 0.29
EXOSC3-203ENST00000465229 ZNF669Q96BR6 464 aaPredicted RBP16.84■□□□□ 0.29
EXOSC3-203ENST00000465229 CDKN2AIPNLQ96HQ2 116 aa16.84■□□□□ 0.29
EXOSC3-203ENST00000465229 TBATAQ96M53 351 aa16.84■□□□□ 0.29
EXOSC3-203ENST00000465229 GPR174Q9BXC1 333 aa16.84■□□□□ 0.29
EXOSC3-203ENST00000465229 C1QTNF2Q9BXJ5 285 aa16.84■□□□□ 0.29
EXOSC3-203ENST00000465229 VPS11Q9H270 941 aa16.84■□□□□ 0.29
EXOSC3-203ENST00000465229 PKD2L2Q9NZM6 624 aa16.84■□□□□ 0.29
EXOSC3-203ENST00000465229 MBD1Q9UIS9 605 aaPredicted RBP16.84■□□□□ 0.29
EXOSC3-203ENST00000465229 FBXO4Q9UKT5 387 aa16.84■□□□□ 0.29
EXOSC3-203ENST00000465229 RGSL1A5PLK6 1076 aa16.83■□□□□ 0.28
EXOSC3-203ENST00000465229 PRR33A8MZF0 331 aa16.83■□□□□ 0.28
EXOSC3-203ENST00000465229 TRIM49D1C9J1S8 452 aa16.83■□□□□ 0.28
EXOSC3-203ENST00000465229 WNT9AO14904 365 aa16.83■□□□□ 0.28
EXOSC3-203ENST00000465229 TM7SF2O76062 418 aa16.83■□□□□ 0.28
EXOSC3-203ENST00000465229 SLC34A2O95436 690 aa16.83■□□□□ 0.28
EXOSC3-203ENST00000465229 ARNTP27540 789 aa16.83■□□□□ 0.28
EXOSC3-203ENST00000465229 FOXN2P32314 431 aa16.83■□□□□ 0.28
EXOSC3-203ENST00000465229 HADHAP40939 763 aa16.83■□□□□ 0.28
EXOSC3-203ENST00000465229 CCNFP41002 786 aa16.83■□□□□ 0.28
EXOSC3-203ENST00000465229 IFT88Q13099 833 aa16.83■□□□□ 0.28
EXOSC3-203ENST00000465229 FGL2Q14314 439 aa16.83■□□□□ 0.28
EXOSC3-203ENST00000465229 ZNF284Q2VY69 593 aa16.83■□□□□ 0.28
EXOSC3-203ENST00000465229 WDR5BQ86VZ2 330 aa16.83■□□□□ 0.28
EXOSC3-203ENST00000465229 HDAC10Q969S8 669 aa16.83■□□□□ 0.28
EXOSC3-203ENST00000465229 DTD2Q96FN9 168 aa16.83■□□□□ 0.28
EXOSC3-203ENST00000465229 SERAC1Q96JX3 654 aa16.83■□□□□ 0.28
EXOSC3-203ENST00000465229 ELAC2Q9BQ52 826 aaKnown RBP16.83■□□□□ 0.28
EXOSC3-203ENST00000465229 C6orf106Q9H6K1 298 aaPredicted RBP16.83■□□□□ 0.28
EXOSC3-203ENST00000465229 SUDS3Q9H7L9 328 aaPredicted RBP16.83■□□□□ 0.28
EXOSC3-203ENST00000465229 IL26Q9NPH9 171 aa16.83■□□□□ 0.28
EXOSC3-203ENST00000465229 FGFR1OP2Q9NVK5 253 aa16.83■□□□□ 0.28
EXOSC3-203ENST00000465229 CD84Q9UIB8 345 aa16.83■□□□□ 0.28
EXOSC3-203ENST00000465229 FKBPLQ9UIM3 349 aa16.83■□□□□ 0.28
EXOSC3-203ENST00000465229 BPTFQ12830 3046 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms