RNA–Protein interactions for RNA: ENST00000464867.1

APP-213, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 816 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-213ENST00000464867 SUCOQ9UBS9 1254 aaKnown RBP9.34□□□□□ -0.91
APP-213ENST00000464867 TRAF3IP3Q9Y228 551 aa9.34□□□□□ -0.91
APP-213ENST00000464867 TRBV23OR9-2A0A075B6M9 112 aa9.33□□□□□ -0.92
APP-213ENST00000464867 E5RJQ4 531 aa9.33□□□□□ -0.92
APP-213ENST00000464867 HSF2BPO75031 334 aa9.33□□□□□ -0.92
APP-213ENST00000464867 SRGAP2O75044 1071 aa9.33□□□□□ -0.92
APP-213ENST00000464867 ANKRD34CP0C6C1 535 aa9.33□□□□□ -0.92
APP-213ENST00000464867 MYCLP1P12525 358 aaPredicted RBP9.33□□□□□ -0.92
APP-213ENST00000464867 EDN3P14138 238 aa9.33□□□□□ -0.92
APP-213ENST00000464867 LPOP22079 712 aaPredicted RBP9.33□□□□□ -0.92
APP-213ENST00000464867 TRIM23P36406 574 aa9.33□□□□□ -0.92
APP-213ENST00000464867 GPD2P43304 727 aa9.33□□□□□ -0.92
APP-213ENST00000464867 ART1P52961 327 aa9.33□□□□□ -0.92
APP-213ENST00000464867 LRMPQ12912 555 aa9.33□□□□□ -0.92
APP-213ENST00000464867 ADAM9Q13443 819 aa9.33□□□□□ -0.92
APP-213ENST00000464867 CUL4BQ13620 913 aa9.33□□□□□ -0.92
APP-213ENST00000464867 KYNUQ16719 465 aa9.33□□□□□ -0.92
APP-213ENST00000464867 UGP2Q16851 508 aa9.33□□□□□ -0.92
APP-213ENST00000464867 ZNF630Q2M218 657 aaPredicted RBP9.33□□□□□ -0.92
APP-213ENST00000464867 FOXD4L6Q3SYB3 417 aaPredicted RBP9.33□□□□□ -0.92
APP-213ENST00000464867 BRMS1LQ5PSV4 323 aa9.33□□□□□ -0.92
APP-213ENST00000464867 ATXN7L2Q5T6C5 722 aaPredicted RBP9.33□□□□□ -0.92
APP-213ENST00000464867 VWA5B1Q5TIE3 1220 aa9.33□□□□□ -0.92
APP-213ENST00000464867 FOXD4L3Q6VB84 417 aaPredicted RBP9.33□□□□□ -0.92
APP-213ENST00000464867 BNC2Q6ZN30 1099 aaPredicted RBP9.33□□□□□ -0.92
APP-213ENST00000464867 PPP1R3BQ86XI6 285 aa9.33□□□□□ -0.92
APP-213ENST00000464867 PAF1Q8N7H5 531 aa9.33□□□□□ -0.92
APP-213ENST00000464867 TMEM102Q8N9M5 508 aaPredicted RBP9.33□□□□□ -0.92
APP-213ENST00000464867 KIAA0895Q8NCT3 520 aa9.33□□□□□ -0.92
APP-213ENST00000464867 C1orf74Q96LT6 269 aa9.33□□□□□ -0.92
APP-213ENST00000464867 BARD1Q99728 777 aaKnown RBP9.33□□□□□ -0.92
APP-213ENST00000464867 LGR4Q9BXB1 951 aa9.33□□□□□ -0.92
APP-213ENST00000464867 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.33□□□□□ -0.92
APP-213ENST00000464867 TTYH3Q9C0H2 523 aa9.33□□□□□ -0.92
APP-213ENST00000464867 BRD8Q9H0E9 1235 aa9.33□□□□□ -0.92
APP-213ENST00000464867 PCDH12Q9NPG4 1184 aa9.33□□□□□ -0.92
APP-213ENST00000464867 SIDT1Q9NXL6 827 aaKnown RBP9.33□□□□□ -0.92
APP-213ENST00000464867 FARSAQ9Y285 508 aaKnown RBP9.33□□□□□ -0.92
APP-213ENST00000464867 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.33□□□□□ -0.92
APP-213ENST00000464867 ACTL7AQ9Y615 435 aa9.33□□□□□ -0.92
APP-213ENST00000464867 CFAP69A5D8W1 941 aa9.32□□□□□ -0.92
APP-213ENST00000464867 GOLGA6L3A6NEY3 463 aa9.32□□□□□ -0.92
APP-213ENST00000464867 TMEM200CA6NKL6 621 aa9.32□□□□□ -0.92
APP-213ENST00000464867 GRID2O43424 1007 aa9.32□□□□□ -0.92
APP-213ENST00000464867 SPAG6O75602 509 aa9.32□□□□□ -0.92
APP-213ENST00000464867 RECQL5O94762 991 aaPredicted RBP9.32□□□□□ -0.92
APP-213ENST00000464867 RPS18P62269 152 aaKnown RBP9.32□□□□□ -0.92
APP-213ENST00000464867 PPP2R2AP63151 447 aa9.32□□□□□ -0.92
APP-213ENST00000464867 HHEXQ03014 270 aa9.32□□□□□ -0.92
APP-213ENST00000464867 NFATC2Q13469 925 aa9.32□□□□□ -0.92
APP-213ENST00000464867 ZNF235Q14590 738 aa9.32□□□□□ -0.92
APP-213ENST00000464867 GRM3Q14832 879 aa9.32□□□□□ -0.92
APP-213ENST00000464867 STK38Q15208 465 aa9.32□□□□□ -0.92
APP-213ENST00000464867 TAF5Q15542 800 aa9.32□□□□□ -0.92
APP-213ENST00000464867 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.32□□□□□ -0.92
APP-213ENST00000464867 TCERG1LQ5VWI1 586 aa9.32□□□□□ -0.92
APP-213ENST00000464867 HGSNATQ68CP4 663 aa9.32□□□□□ -0.92
APP-213ENST00000464867 PNCKQ6P2M8 343 aa9.32□□□□□ -0.92
APP-213ENST00000464867 TMEM110Q86TL2 294 aa9.32□□□□□ -0.92
APP-213ENST00000464867 KCNMB4Q86W47 210 aa9.32□□□□□ -0.92
APP-213ENST00000464867 DRC7Q8IY82 874 aa9.32□□□□□ -0.92
APP-213ENST00000464867 ZADH2Q8N4Q0 377 aa9.32□□□□□ -0.92
APP-213ENST00000464867 ARFGAP1Q8N6T3 406 aa9.32□□□□□ -0.92
APP-213ENST00000464867 SGSM3Q96HU1 749 aa9.32□□□□□ -0.92
APP-213ENST00000464867 SLC2A13Q96QE2 648 aa9.32□□□□□ -0.92
APP-213ENST00000464867 ZYG11BQ9C0D3 744 aa9.32□□□□□ -0.92
APP-213ENST00000464867 PDE7BQ9NP56 450 aa9.32□□□□□ -0.92
APP-213ENST00000464867 TMEM51Q9NW97 253 aa9.32□□□□□ -0.92
APP-213ENST00000464867 ZNHIT2Q9UHR6 403 aa9.32□□□□□ -0.92
APP-213ENST00000464867 SUFUQ9UMX1 484 aa9.32□□□□□ -0.92
APP-213ENST00000464867 MFHAS1Q9Y4C4 1052 aa9.32□□□□□ -0.92
APP-213ENST00000464867 MORC2Q9Y6X9 1032 aaPredicted RBP9.32□□□□□ -0.92
APP-213ENST00000464867 ACANP16112 2415 aa9.32□□□□□ -0.92
APP-213ENST00000464867 FAM221AA4D161 298 aa9.31□□□□□ -0.92
APP-213ENST00000464867 TOX3O15405 576 aaPredicted RBP9.31□□□□□ -0.92
APP-213ENST00000464867 POLR2DO15514 142 aaKnown RBP9.31□□□□□ -0.92
APP-213ENST00000464867 KCNN4O15554 427 aa9.31□□□□□ -0.92
APP-213ENST00000464867 MED7O43513 233 aa9.31□□□□□ -0.92
APP-213ENST00000464867 BUB1BO60566 1050 aaPredicted RBP9.31□□□□□ -0.92
APP-213ENST00000464867 GRAP2O75791 330 aa9.31□□□□□ -0.92
APP-213ENST00000464867 IPO13O94829 963 aaKnown RBP9.31□□□□□ -0.92
APP-213ENST00000464867 CD160O95971 181 aa9.31□□□□□ -0.92
APP-213ENST00000464867 F9P00740 461 aa9.31□□□□□ -0.92
APP-213ENST00000464867 CEACAM5P06731 702 aa9.31□□□□□ -0.92
APP-213ENST00000464867 STSP08842 583 aa9.31□□□□□ -0.92
APP-213ENST00000464867 ELFN1P0C7U0 828 aa9.31□□□□□ -0.92
APP-213ENST00000464867 FGF5P12034 268 aa9.31□□□□□ -0.92
APP-213ENST00000464867 HNRNPH3P31942 346 aaKnown RBP9.31□□□□□ -0.92
APP-213ENST00000464867 ADCY8P40145 1251 aa9.31□□□□□ -0.92
APP-213ENST00000464867 SEPHS1P49903 392 aa9.31□□□□□ -0.92
APP-213ENST00000464867 RHOAP61586 193 aa9.31□□□□□ -0.92
APP-213ENST00000464867 IL10RAQ13651 578 aa9.31□□□□□ -0.92
APP-213ENST00000464867 RAPSNQ13702 412 aa9.31□□□□□ -0.92
APP-213ENST00000464867 NFIL3Q16649 462 aa9.31□□□□□ -0.92
APP-213ENST00000464867 MIIPQ5JXC2 388 aa9.31□□□□□ -0.92
APP-213ENST00000464867 MTFR2Q6P444 385 aa9.31□□□□□ -0.92
APP-213ENST00000464867 BRAT1Q6PJG6 821 aa9.31□□□□□ -0.92
APP-213ENST00000464867 MRGPRGQ86SM5 289 aa9.31□□□□□ -0.92
APP-213ENST00000464867 ZNF354CQ86Y25 554 aa9.31□□□□□ -0.92
APP-213ENST00000464867 CEP57L1Q8IYX8 460 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms