RNA–Protein interactions for RNA: ENST00000464616.6

GARNL3-213, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-213ENST00000464616 GLDNQ6ZMI3 551 aaPredicted RBP3.16□□□□□ -1.9
GARNL3-213ENST00000464616 MOB3CQ70IA8 216 aa3.16□□□□□ -1.9
GARNL3-213ENST00000464616 LINGO2Q7L985 606 aa3.16□□□□□ -1.9
GARNL3-213ENST00000464616 SHFQ7M4L6 423 aa3.16□□□□□ -1.9
GARNL3-213ENST00000464616 PRPF39Q86UA1 669 aaKnown RBP3.16□□□□□ -1.9
GARNL3-213ENST00000464616 FAM72BQ86X60 149 aa3.16□□□□□ -1.9
GARNL3-213ENST00000464616 TICAM2Q86XR7 235 aa3.16□□□□□ -1.9
GARNL3-213ENST00000464616 CNTROBQ8N137 903 aa3.16□□□□□ -1.9
GARNL3-213ENST00000464616 TTC39CQ8N584 583 aa3.16□□□□□ -1.9
GARNL3-213ENST00000464616 SRBD1Q8N5C6 995 aaKnown RBP3.16□□□□□ -1.9
GARNL3-213ENST00000464616 NEXN-AS1Q8NBZ9 246 aa3.16□□□□□ -1.9
GARNL3-213ENST00000464616 OR13A1Q8NGR1 328 aa3.16□□□□□ -1.9
GARNL3-213ENST00000464616 PSPC1Q8WXF1 523 aaKnown RBP3.16□□□□□ -1.9
GARNL3-213ENST00000464616 SH3GL2Q99962 352 aa3.16□□□□□ -1.9
GARNL3-213ENST00000464616 MSTO1Q9BUK6 570 aa3.16□□□□□ -1.9
GARNL3-213ENST00000464616 PLEKHA4Q9H4M7 779 aa3.16□□□□□ -1.9
GARNL3-213ENST00000464616 SEPT11Q9NVA2 429 aaKnown RBP3.16□□□□□ -1.9
GARNL3-213ENST00000464616 TBC1D29Q9UFV1 150 aa3.16□□□□□ -1.9
GARNL3-213ENST00000464616 CHORDC1Q9UHD1 332 aaPredicted RBP3.16□□□□□ -1.9
GARNL3-213ENST00000464616 POU2F3Q9UKI9 436 aa3.16□□□□□ -1.9
GARNL3-213ENST00000464616 INTS6Q9UL03 887 aaKnown RBP3.16□□□□□ -1.9
GARNL3-213ENST00000464616 PIAS3Q9Y6X2 628 aa3.16□□□□□ -1.9
GARNL3-213ENST00000464616 A0A0G2JPF8 293 aa3.15□□□□□ -1.91
GARNL3-213ENST00000464616 A0A0U1RQF3 1178 aa3.15□□□□□ -1.91
GARNL3-213ENST00000464616 HNRNPCL3B7ZW38 293 aa3.15□□□□□ -1.91
GARNL3-213ENST00000464616 WNT9BO14905 357 aa3.15□□□□□ -1.91
GARNL3-213ENST00000464616 SEC14L5O43304 696 aa3.15□□□□□ -1.91
GARNL3-213ENST00000464616 HS6ST1O60243 411 aa3.15□□□□□ -1.91
GARNL3-213ENST00000464616 DOK2O60496 412 aa3.15□□□□□ -1.91
GARNL3-213ENST00000464616 SRPRAP08240 638 aaKnown RBP3.15□□□□□ -1.91
GARNL3-213ENST00000464616 RNF224P0DH78 156 aa3.15□□□□□ -1.91
GARNL3-213ENST00000464616 HNRNPCL4P0DMR1 293 aa3.15□□□□□ -1.91
GARNL3-213ENST00000464616 SRD5A1P18405 259 aa3.15□□□□□ -1.91
GARNL3-213ENST00000464616 SP100P23497 879 aaPredicted RBP3.15□□□□□ -1.91
GARNL3-213ENST00000464616 NNMTP40261 264 aa3.15□□□□□ -1.91
GARNL3-213ENST00000464616 RGS2P41220 211 aa3.15□□□□□ -1.91
GARNL3-213ENST00000464616 RAD52P43351 418 aa3.15□□□□□ -1.91
GARNL3-213ENST00000464616 PIP4K2AP48426 406 aaPredicted RBP3.15□□□□□ -1.91
GARNL3-213ENST00000464616 VEGFCP49767 419 aa3.15□□□□□ -1.91
GARNL3-213ENST00000464616 ZNF132P52740 706 aa3.15□□□□□ -1.91
GARNL3-213ENST00000464616 CDH8P55286 799 aa3.15□□□□□ -1.91
GARNL3-213ENST00000464616 KRTAP10-5P60370 271 aa3.15□□□□□ -1.91
GARNL3-213ENST00000464616 MRPS34P82930 218 aaKnown RBP3.15□□□□□ -1.91
GARNL3-213ENST00000464616 FGFBP1Q14512 234 aa3.15□□□□□ -1.91
GARNL3-213ENST00000464616 ARHGEF6Q15052 776 aa3.15□□□□□ -1.91
GARNL3-213ENST00000464616 NTRK2Q16620 822 aa3.15□□□□□ -1.91
GARNL3-213ENST00000464616 ZSCAN23Q3MJ62 389 aa3.15□□□□□ -1.91
GARNL3-213ENST00000464616 FBXO43Q4G163 708 aa3.15□□□□□ -1.91
GARNL3-213ENST00000464616 FAM133BQ5BKY9 247 aaKnown RBP3.15□□□□□ -1.91
GARNL3-213ENST00000464616 PLEKHA7Q6IQ23 1121 aa3.15□□□□□ -1.91
GARNL3-213ENST00000464616 FAM122CQ6P4D5 195 aa3.15□□□□□ -1.91
GARNL3-213ENST00000464616 ZNF771Q7L3S4 317 aaPredicted RBP3.15□□□□□ -1.91
GARNL3-213ENST00000464616 CACNA2D4Q7Z3S7 1137 aa3.15□□□□□ -1.91
GARNL3-213ENST00000464616 SZRD1Q7Z422 152 aa3.15□□□□□ -1.91
GARNL3-213ENST00000464616 ZC3HC1Q86WB0 502 aaKnown RBP3.15□□□□□ -1.91
GARNL3-213ENST00000464616 METTL27Q8N6F8 245 aaPredicted RBP3.15□□□□□ -1.91
GARNL3-213ENST00000464616 GJC3Q8NFK1 279 aa3.15□□□□□ -1.91
GARNL3-213ENST00000464616 CTCFLQ8NI51 663 aaPredicted RBP3.15□□□□□ -1.91
GARNL3-213ENST00000464616 SNAPC3Q92966 411 aa3.15□□□□□ -1.91
GARNL3-213ENST00000464616 MMABQ96EY8 250 aaPredicted RBP3.15□□□□□ -1.91
GARNL3-213ENST00000464616 C1orf74Q96LT6 269 aa3.15□□□□□ -1.91
GARNL3-213ENST00000464616 CMTM3Q96MX0 182 aa3.15□□□□□ -1.91
GARNL3-213ENST00000464616 ZNF570Q96NI8 536 aa3.15□□□□□ -1.91
GARNL3-213ENST00000464616 YME1L1Q96TA2 773 aa3.15□□□□□ -1.91
GARNL3-213ENST00000464616 SEPT5Q99719 369 aaPredicted RBP3.15□□□□□ -1.91
GARNL3-213ENST00000464616 FAM110AQ9BQ89 295 aa3.15□□□□□ -1.91
GARNL3-213ENST00000464616 SIL1Q9H173 461 aa3.15□□□□□ -1.91
GARNL3-213ENST00000464616 SCRT2Q9NQ03 307 aa3.15□□□□□ -1.91
GARNL3-213ENST00000464616 SLC35C2Q9NQQ7 365 aa3.15□□□□□ -1.91
GARNL3-213ENST00000464616 PSD3Q9NYI0 1048 aa3.15□□□□□ -1.91
GARNL3-213ENST00000464616 CLIC5Q9NZA1 410 aa3.15□□□□□ -1.91
GARNL3-213ENST00000464616 MARCH4Q9P2E8 410 aaPredicted RBP3.15□□□□□ -1.91
GARNL3-213ENST00000464616 ADD3Q9UEY8 706 aaKnown RBP3.15□□□□□ -1.91
GARNL3-213ENST00000464616 ZNF215Q9UL58 517 aaPredicted RBP3.15□□□□□ -1.91
GARNL3-213ENST00000464616 CORO1CQ9ULV4 474 aaPredicted RBP3.15□□□□□ -1.91
GARNL3-213ENST00000464616 TCF19Q9Y242 345 aa3.15□□□□□ -1.91
GARNL3-213ENST00000464616 CAPN7Q9Y6W3 813 aa3.15□□□□□ -1.91
GARNL3-213ENST00000464616 A3GALT2U3KPV4 340 aa3.15□□□□□ -1.91
GARNL3-213ENST00000464616 ADGRF5Q8IZF2 1346 aa3.15□□□□□ -1.91
GARNL3-213ENST00000464616 ATXN2Q99700 1313 aaKnown RBP3.15□□□□□ -1.91
GARNL3-213ENST00000464616 RUSC2Q8N2Y8 1516 aa3.14□□□□□ -1.91
GARNL3-213ENST00000464616 hCG_1807616A0A1W2PRN6 198 aa3.14□□□□□ -1.91
GARNL3-213ENST00000464616 KANSL1LA0AUZ9 987 aa3.14□□□□□ -1.91
GARNL3-213ENST00000464616 ERI2A8K979 691 aaKnown RBP3.14□□□□□ -1.91
GARNL3-213ENST00000464616 HSPB2A8KAH6 182 aa3.14□□□□□ -1.91
GARNL3-213ENST00000464616 KLRF2D3W0D1 207 aa3.14□□□□□ -1.91
GARNL3-213ENST00000464616 NPIPB11E5RHQ5 1161 aa3.14□□□□□ -1.91
GARNL3-213ENST00000464616 P2RY10O00398 339 aa3.14□□□□□ -1.91
GARNL3-213ENST00000464616 GPC4O75487 556 aa3.14□□□□□ -1.91
GARNL3-213ENST00000464616 SLC22A3O75751 556 aa3.14□□□□□ -1.91
GARNL3-213ENST00000464616 KDM4BO94953 1096 aa3.14□□□□□ -1.91
GARNL3-213ENST00000464616 CLDN14O95500 239 aa3.14□□□□□ -1.91
GARNL3-213ENST00000464616 HIST1H2ABP04908 130 aa3.14□□□□□ -1.91
GARNL3-213ENST00000464616 RB1P06400 928 aa3.14□□□□□ -1.91
GARNL3-213ENST00000464616 ETFAP13804 333 aa3.14□□□□□ -1.91
GARNL3-213ENST00000464616 PORP16435 677 aaPredicted RBP3.14□□□□□ -1.91
GARNL3-213ENST00000464616 HIST1H2ADP20671 130 aa3.14□□□□□ -1.91
GARNL3-213ENST00000464616 CD72P21854 359 aa3.14□□□□□ -1.91
GARNL3-213ENST00000464616 RRM1P23921 792 aa3.14□□□□□ -1.91
GARNL3-213ENST00000464616 MCM3P25205 808 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms