RNA–Protein interactions for RNA: ENST00000463477.5

PTPRD-207, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 1,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-207ENST00000463477 NVLO15381 856 aaKnown RBP9.89□□□□□ -0.83
PTPRD-207ENST00000463477 SLC7A4O43246 635 aa9.89□□□□□ -0.83
PTPRD-207ENST00000463477 ACSL4O60488 711 aa9.89□□□□□ -0.83
PTPRD-207ENST00000463477 PMPCBO75439 489 aa9.89□□□□□ -0.83
PTPRD-207ENST00000463477 CYBBP04839 570 aa9.89□□□□□ -0.83
PTPRD-207ENST00000463477 CISD3P0C7P0 127 aa9.89□□□□□ -0.83
PTPRD-207ENST00000463477 TDGF1P13385 188 aa9.89□□□□□ -0.83
PTPRD-207ENST00000463477 SLC1A2P43004 574 aa9.89□□□□□ -0.83
PTPRD-207ENST00000463477 GRIA4P48058 902 aa9.89□□□□□ -0.83
PTPRD-207ENST00000463477 SLC11A2P49281 568 aa9.89□□□□□ -0.83
PTPRD-207ENST00000463477 MRPS21P82921 87 aaKnown RBP9.89□□□□□ -0.83
PTPRD-207ENST00000463477 MXRA7P84157 204 aa9.89□□□□□ -0.83
PTPRD-207ENST00000463477 SATB1Q01826 763 aa9.89□□□□□ -0.83
PTPRD-207ENST00000463477 CSTF1Q05048 431 aaKnown RBP9.89□□□□□ -0.83
PTPRD-207ENST00000463477 IL10RBQ08334 325 aa9.89□□□□□ -0.83
PTPRD-207ENST00000463477 MESP2Q0VG99 397 aa9.89□□□□□ -0.83
PTPRD-207ENST00000463477 BLMHQ13867 455 aa9.89□□□□□ -0.83
PTPRD-207ENST00000463477 HERC3Q15034 1050 aa9.89□□□□□ -0.83
PTPRD-207ENST00000463477 CNGA3Q16281 694 aa9.89□□□□□ -0.83
PTPRD-207ENST00000463477 PARP15Q460N3 678 aa9.89□□□□□ -0.83
PTPRD-207ENST00000463477 C5orf22Q49AR2 442 aa9.89□□□□□ -0.83
PTPRD-207ENST00000463477 MPPE1Q53F39 396 aa9.89□□□□□ -0.83
PTPRD-207ENST00000463477 MARC1Q5VT66 337 aa9.89□□□□□ -0.83
PTPRD-207ENST00000463477 SEL1L3Q68CR1 1132 aa9.89□□□□□ -0.83
PTPRD-207ENST00000463477 NEPROQ6NW34 567 aa9.89□□□□□ -0.83
PTPRD-207ENST00000463477 RIPOR1Q6ZS17 1223 aa9.89□□□□□ -0.83
PTPRD-207ENST00000463477 PIWIL4Q7Z3Z4 852 aaKnown RBP9.89□□□□□ -0.83
PTPRD-207ENST00000463477 FSTL5Q8N475 847 aaPredicted RBP9.89□□□□□ -0.83
PTPRD-207ENST00000463477 KCTD4Q8WVF5 259 aa9.89□□□□□ -0.83
PTPRD-207ENST00000463477 TMA16Q96EY4 203 aaKnown RBP9.89□□□□□ -0.83
PTPRD-207ENST00000463477 TSPAN17Q96FV3 270 aa9.89□□□□□ -0.83
PTPRD-207ENST00000463477 PANX3Q96QZ0 392 aa9.89□□□□□ -0.83
PTPRD-207ENST00000463477 CXorf56Q9H5V9 222 aa9.89□□□□□ -0.83
PTPRD-207ENST00000463477 ZNF385DQ9H6B1 395 aa9.89□□□□□ -0.83
PTPRD-207ENST00000463477 TCF7L2Q9NQB0 619 aa9.89□□□□□ -0.83
PTPRD-207ENST00000463477 MPP6Q9NZW5 540 aa9.89□□□□□ -0.83
PTPRD-207ENST00000463477 CORO1CQ9ULV4 474 aaPredicted RBP9.89□□□□□ -0.83
PTPRD-207ENST00000463477 RUVBL2Q9Y230 463 aaKnown RBP9.89□□□□□ -0.83
PTPRD-207ENST00000463477 SLC27A6Q9Y2P4 619 aa9.89□□□□□ -0.83
PTPRD-207ENST00000463477 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.89□□□□□ -0.83
PTPRD-207ENST00000463477 GOLGA8QA0A0J9YX86 632 aa9.88□□□□□ -0.83
PTPRD-207ENST00000463477 LOC285095A0A1B0GVY8 99 aa9.88□□□□□ -0.83
PTPRD-207ENST00000463477 GOLGA8OA6NCC3 632 aa9.88□□□□□ -0.83
PTPRD-207ENST00000463477 MROH6A6NGR9 719 aa9.88□□□□□ -0.83
PTPRD-207ENST00000463477 PROB1E7EW31 1015 aa9.88□□□□□ -0.83
PTPRD-207ENST00000463477 GOLGA8NF8WBI6 632 aa9.88□□□□□ -0.83
PTPRD-207ENST00000463477 PHGDHO43175 533 aaKnown RBP9.88□□□□□ -0.83
PTPRD-207ENST00000463477 DLX3O60479 287 aa9.88□□□□□ -0.83
PTPRD-207ENST00000463477 MOCS2O96007 188 aaPredicted RBP9.88□□□□□ -0.83
PTPRD-207ENST00000463477 EPOP01588 193 aa9.88□□□□□ -0.83
PTPRD-207ENST00000463477 MMP2P08253 660 aa9.88□□□□□ -0.83
PTPRD-207ENST00000463477 ATXN8OSP0DMR3 200 aa9.88□□□□□ -0.83
PTPRD-207ENST00000463477 COX4I1P13073 169 aa9.88□□□□□ -0.83
PTPRD-207ENST00000463477 ATP5F1P24539 256 aaPredicted RBP9.88□□□□□ -0.83
PTPRD-207ENST00000463477 GMPRP36959 345 aa9.88□□□□□ -0.83
PTPRD-207ENST00000463477 PLA2G5P39877 138 aa9.88□□□□□ -0.83
PTPRD-207ENST00000463477 NBL1P41271 181 aa9.88□□□□□ -0.83
PTPRD-207ENST00000463477 KIR2DL1P43626 348 aaPredicted RBP9.88□□□□□ -0.83
PTPRD-207ENST00000463477 AP2B1P63010 937 aa9.88□□□□□ -0.83
PTPRD-207ENST00000463477 MPP1Q00013 466 aa9.88□□□□□ -0.83
PTPRD-207ENST00000463477 ACVR1Q04771 509 aa9.88□□□□□ -0.83
PTPRD-207ENST00000463477 GALNT1Q10472 559 aaPredicted RBP9.88□□□□□ -0.83
PTPRD-207ENST00000463477 KLF10Q13118 480 aa9.88□□□□□ -0.83
PTPRD-207ENST00000463477 SLC9B1Q4ZJI4 515 aa9.88□□□□□ -0.83
PTPRD-207ENST00000463477 MPP7Q5T2T1 576 aa9.88□□□□□ -0.83
PTPRD-207ENST00000463477 ALG1LQ6GMV1 187 aa9.88□□□□□ -0.83
PTPRD-207ENST00000463477 SYT13Q7L8C5 426 aa9.88□□□□□ -0.83
PTPRD-207ENST00000463477 SLC41A1Q8IVJ1 513 aa9.88□□□□□ -0.83
PTPRD-207ENST00000463477 APLFQ8IW19 511 aaPredicted RBP9.88□□□□□ -0.83
PTPRD-207ENST00000463477 DENND6AQ8IWF6 608 aa9.88□□□□□ -0.83
PTPRD-207ENST00000463477 TERB1Q8NA31 727 aa9.88□□□□□ -0.83
PTPRD-207ENST00000463477 ZBTB44Q8NCP5 570 aa9.88□□□□□ -0.83
PTPRD-207ENST00000463477 PPFIBP2Q8ND30 876 aa9.88□□□□□ -0.83
PTPRD-207ENST00000463477 RPLP0P6Q8NHW5 317 aa9.88□□□□□ -0.83
PTPRD-207ENST00000463477 DDI1Q8WTU0 396 aa9.88□□□□□ -0.83
PTPRD-207ENST00000463477 SCG3Q8WXD2 468 aaKnown RBP9.88□□□□□ -0.83
PTPRD-207ENST00000463477 FAM122AQ96E09 287 aa9.88□□□□□ -0.83
PTPRD-207ENST00000463477 HMCESQ96FZ2 354 aa9.88□□□□□ -0.83
PTPRD-207ENST00000463477 FAR2Q96K12 515 aa9.88□□□□□ -0.83
PTPRD-207ENST00000463477 SCYL1Q96KG9 808 aa9.88□□□□□ -0.83
PTPRD-207ENST00000463477 ZNF599Q96NL3 588 aa9.88□□□□□ -0.83
PTPRD-207ENST00000463477 DDX50Q9BQ39 737 aaKnown RBP9.88□□□□□ -0.83
PTPRD-207ENST00000463477 SLC2A11Q9BYW1 496 aa9.88□□□□□ -0.83
PTPRD-207ENST00000463477 NMRK1Q9NWW6 199 aa9.88□□□□□ -0.83
PTPRD-207ENST00000463477 PLK2Q9NYY3 685 aa9.88□□□□□ -0.83
PTPRD-207ENST00000463477 VPS28Q9UK41 221 aa9.88□□□□□ -0.83
PTPRD-207ENST00000463477 LRCH1Q9Y2L9 728 aa9.88□□□□□ -0.83
PTPRD-207ENST00000463477 ATG2BQ96BY7 2078 aa9.88□□□□□ -0.83
PTPRD-207ENST00000463477 GOLGA8TH3BQL2 631 aa9.87□□□□□ -0.83
PTPRD-207ENST00000463477 K7ESF4 209 aa9.87□□□□□ -0.83
PTPRD-207ENST00000463477 TRIM24O15164 1050 aa9.87□□□□□ -0.83
PTPRD-207ENST00000463477 GRID2O43424 1007 aa9.87□□□□□ -0.83
PTPRD-207ENST00000463477 ZBTB14O43829 449 aa9.87□□□□□ -0.83
PTPRD-207ENST00000463477 WISP3O95389 354 aaPredicted RBP9.87□□□□□ -0.83
PTPRD-207ENST00000463477 PIGNO95427 931 aa9.87□□□□□ -0.83
PTPRD-207ENST00000463477 RBP1P09455 135 aa9.87□□□□□ -0.83
PTPRD-207ENST00000463477 THRAP10827 490 aa9.87□□□□□ -0.83
PTPRD-207ENST00000463477 CHRM1P11229 460 aaPredicted RBP9.87□□□□□ -0.83
PTPRD-207ENST00000463477 TFEBP19484 476 aa9.87□□□□□ -0.83
PTPRD-207ENST00000463477 ABCG1P45844 678 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms