RNA–Protein interactions for RNA: ENST00000463370.5

VAPB-203, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 2,393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-203ENST00000463370 NSUN5Q96P11 429 aaKnown RBP12.74□□□□□ -0.37
VAPB-203ENST00000463370 CERS4Q9HA82 394 aa12.74□□□□□ -0.37
VAPB-203ENST00000463370 IL26Q9NPH9 171 aa12.74□□□□□ -0.37
VAPB-203ENST00000463370 SPHK2Q9NRA0 654 aa12.74□□□□□ -0.37
VAPB-203ENST00000463370 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.73□□□□□ -0.37
VAPB-203ENST00000463370 NPEPPSL1A6NEC2 478 aa12.73□□□□□ -0.37
VAPB-203ENST00000463370 C5orf67F2Z3F1 127 aa12.73□□□□□ -0.37
VAPB-203ENST00000463370 SOCS5O75159 536 aa12.73□□□□□ -0.37
VAPB-203ENST00000463370 PABPC1P11940 636 aaKnown RBP12.73□□□□□ -0.37
VAPB-203ENST00000463370 BPIP17213 487 aa12.73□□□□□ -0.37
VAPB-203ENST00000463370 SERPINB5P36952 375 aa12.73□□□□□ -0.37
VAPB-203ENST00000463370 MYLK3Q32MK0 819 aa12.73□□□□□ -0.37
VAPB-203ENST00000463370 ARHGAP15Q53QZ3 475 aa12.73□□□□□ -0.37
VAPB-203ENST00000463370 RFLNAQ6ZTI6 216 aa12.73□□□□□ -0.37
VAPB-203ENST00000463370 TMPRSS6Q8IU80 811 aa12.73□□□□□ -0.37
VAPB-203ENST00000463370 ADGRG2Q8IZP9 1017 aa12.73□□□□□ -0.37
VAPB-203ENST00000463370 EEF1AKMT1Q8WVE0 214 aa12.73□□□□□ -0.37
VAPB-203ENST00000463370 MCUR1Q96AQ8 359 aa12.73□□□□□ -0.37
VAPB-203ENST00000463370 CCDC126Q96EE4 140 aa12.73□□□□□ -0.37
VAPB-203ENST00000463370 LBHD1Q9BQE6 289 aaPredicted RBP12.73□□□□□ -0.37
VAPB-203ENST00000463370 P2RY12Q9H244 342 aa12.73□□□□□ -0.37
VAPB-203ENST00000463370 SARS2Q9NP81 518 aaKnown RBP12.73□□□□□ -0.37
VAPB-203ENST00000463370 TSR3Q9UJK0 312 aaKnown RBP12.73□□□□□ -0.37
VAPB-203ENST00000463370 ANKRD36A6QL64 1941 aa12.73□□□□□ -0.37
VAPB-203ENST00000463370 A0A1B0GTL3 188 aa12.73□□□□□ -0.37
VAPB-203ENST00000463370 CAPN8A6NHC0 703 aa12.73□□□□□ -0.37
VAPB-203ENST00000463370 SDHDO14521 159 aa12.73□□□□□ -0.37
VAPB-203ENST00000463370 PEX11AO75192 247 aa12.73□□□□□ -0.37
VAPB-203ENST00000463370 CHRM3P20309 590 aa12.73□□□□□ -0.37
VAPB-203ENST00000463370 DDX6P26196 483 aaKnown RBP eCLIP12.73□□□□□ -0.379e-6■■■■□ 22.9
VAPB-203ENST00000463370 SERPINA4P29622 427 aa12.73□□□□□ -0.37
VAPB-203ENST00000463370 WEE1P30291 646 aa12.73□□□□□ -0.37
VAPB-203ENST00000463370 PGM1P36871 562 aa12.73□□□□□ -0.37
VAPB-203ENST00000463370 CCNHP51946 323 aaPredicted RBP12.73□□□□□ -0.37
VAPB-203ENST00000463370 HERVK_113P63132 956 aa12.73□□□□□ -0.37
VAPB-203ENST00000463370 NFKB2Q00653 900 aa12.73□□□□□ -0.37
VAPB-203ENST00000463370 BTKQ06187 659 aa12.73□□□□□ -0.37
VAPB-203ENST00000463370 CACNG1Q06432 222 aa12.73□□□□□ -0.37
VAPB-203ENST00000463370 SLC20A2Q08357 652 aa12.73□□□□□ -0.37
VAPB-203ENST00000463370 KLF10Q13118 480 aa12.73□□□□□ -0.37
VAPB-203ENST00000463370 NAA25Q14CX7 972 aa12.73□□□□□ -0.37
VAPB-203ENST00000463370 E2F5Q15329 346 aa12.73□□□□□ -0.37
VAPB-203ENST00000463370 NXNQ6DKJ4 435 aa12.73□□□□□ -0.37
VAPB-203ENST00000463370 CYHR1Q6ZMK1 362 aa12.73□□□□□ -0.37
VAPB-203ENST00000463370 SLC22A9Q8IVM8 553 aa12.73□□□□□ -0.37
VAPB-203ENST00000463370 CPNE9Q8IYJ1 553 aa12.73□□□□□ -0.37
VAPB-203ENST00000463370 L3HYPDHQ96EM0 354 aa12.73□□□□□ -0.37
VAPB-203ENST00000463370 CATSPER2Q96P56 530 aa12.73□□□□□ -0.37
VAPB-203ENST00000463370 LENG8Q96PV6 779 aaPredicted RBP12.73□□□□□ -0.37
VAPB-203ENST00000463370 ERVK-6Q9BXR3 956 aa12.73□□□□□ -0.37
VAPB-203ENST00000463370 DERL2Q9GZP9 239 aa12.73□□□□□ -0.37
VAPB-203ENST00000463370 TFB2MQ9H5Q4 396 aaKnown RBP12.73□□□□□ -0.37
VAPB-203ENST00000463370 ZDHHC6Q9H6R6 413 aa12.73□□□□□ -0.37
VAPB-203ENST00000463370 VTI1BQ9UEU0 232 aa12.73□□□□□ -0.37
VAPB-203ENST00000463370 CDYLQ9Y232 598 aa12.73□□□□□ -0.37
VAPB-203ENST00000463370 PRSS21Q9Y6M0 314 aa12.73□□□□□ -0.37
VAPB-203ENST00000463370 SLC30A1Q9Y6M5 507 aa12.73□□□□□ -0.37
VAPB-203ENST00000463370 NOTCH4Q99466 2003 aa12.73□□□□□ -0.37
VAPB-203ENST00000463370 EYSQ5T1H1 3165 aa12.72□□□□□ -0.37
VAPB-203ENST00000463370 NCF1BA6NI72 391 aaPredicted RBP12.72□□□□□ -0.37
VAPB-203ENST00000463370 NCF1CA8MVU1 366 aaPredicted RBP12.72□□□□□ -0.37
VAPB-203ENST00000463370 ECI2O75521 394 aa12.72□□□□□ -0.37
VAPB-203ENST00000463370 NCF1P14598 390 aaPredicted RBP12.72□□□□□ -0.37
VAPB-203ENST00000463370 HOXA9P31269 272 aa12.72□□□□□ -0.37
VAPB-203ENST00000463370 RPL26P61254 145 aaKnown RBP12.72□□□□□ -0.37
VAPB-203ENST00000463370 SNRPD1P62314 119 aaKnown RBP12.72□□□□□ -0.37
VAPB-203ENST00000463370 UBE3AQ05086 875 aa12.72□□□□□ -0.37
VAPB-203ENST00000463370 KPNB1Q14974 876 aaKnown RBP12.72□□□□□ -0.37
VAPB-203ENST00000463370 PPP1R3AQ16821 1122 aa12.72□□□□□ -0.37
VAPB-203ENST00000463370 TRIM68Q6AZZ1 485 aa12.72□□□□□ -0.37
VAPB-203ENST00000463370 CRTC1Q6UUV9 634 aa12.72□□□□□ -0.37
VAPB-203ENST00000463370 SERPINA9Q86WD7 417 aa12.72□□□□□ -0.37
VAPB-203ENST00000463370 CLDN19Q8N6F1 224 aa12.72□□□□□ -0.37
VAPB-203ENST00000463370 RHEBL1Q8TAI7 183 aa12.72□□□□□ -0.37
VAPB-203ENST00000463370 LKAAEAR1Q8TD35 194 aa12.72□□□□□ -0.37
VAPB-203ENST00000463370 CYB5D2Q8WUJ1 264 aa12.72□□□□□ -0.37
VAPB-203ENST00000463370 KIAA1191Q96A73 305 aa12.72□□□□□ -0.37
VAPB-203ENST00000463370 FUBP1Q96AE4 644 aaKnown RBP12.72□□□□□ -0.37
VAPB-203ENST00000463370 RSPRY1Q96DX4 576 aa12.72□□□□□ -0.37
VAPB-203ENST00000463370 MCOLN1Q9GZU1 580 aa12.72□□□□□ -0.37
VAPB-203ENST00000463370 ZNF385DQ9H6B1 395 aa12.72□□□□□ -0.37
VAPB-203ENST00000463370 ASB8Q9H765 288 aa12.72□□□□□ -0.37
VAPB-203ENST00000463370 SYTL2Q9HCH5 934 aa12.72□□□□□ -0.37
VAPB-203ENST00000463370 RPL26L1Q9UNX3 145 aaKnown RBP12.72□□□□□ -0.37
VAPB-203ENST00000463370 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.72□□□□□ -0.37
VAPB-203ENST00000463370 F8W8V4 182 aa12.72□□□□□ -0.37
VAPB-203ENST00000463370 BTN3A1O00481 513 aa12.72□□□□□ -0.37
VAPB-203ENST00000463370 KERAO60938 352 aa12.72□□□□□ -0.37
VAPB-203ENST00000463370 XYLBO75191 536 aa12.72□□□□□ -0.37
VAPB-203ENST00000463370 SMIM24O75264 130 aa12.72□□□□□ -0.37
VAPB-203ENST00000463370 UGT2B4P06133 528 aa12.72□□□□□ -0.37
VAPB-203ENST00000463370 TPBGLP0DKB5 382 aa12.72□□□□□ -0.37
VAPB-203ENST00000463370 ITGB6P18564 788 aa12.72□□□□□ -0.37
VAPB-203ENST00000463370 LHCGRP22888 699 aa12.72□□□□□ -0.37
VAPB-203ENST00000463370 PTGER3P43115 390 aa12.72□□□□□ -0.37
VAPB-203ENST00000463370 MAPK8P45983 427 aa12.72□□□□□ -0.37
VAPB-203ENST00000463370 CLCN7P51798 805 aa12.72□□□□□ -0.37
VAPB-203ENST00000463370 MNAT1P51948 309 aa12.72□□□□□ -0.37
VAPB-203ENST00000463370 COPAP53621 1224 aa12.72□□□□□ -0.37
VAPB-203ENST00000463370 SH3BP2P78314 561 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms