RNA–Protein interactions for RNA: ENST00000463048.3

NUP43-205, Transcript of nucleoporin 43, humanhuman

TSL 3

Gene NUP43, Length 523 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-205ENST00000463048 RIF1Q5UIP0 2472 aaKnown RBP20.12■□□□□ 0.81
NUP43-205ENST00000463048 CACNA1EQ15878 2313 aa20.11■□□□□ 0.81
NUP43-205ENST00000463048 A0A1B0GTQ1 180 aa20.11■□□□□ 0.81
NUP43-205ENST00000463048 OR51F1A6NGY5 319 aa20.11■□□□□ 0.81
NUP43-205ENST00000463048 GAPDHSO14556 408 aaPredicted RBP20.11■□□□□ 0.81
NUP43-205ENST00000463048 FOXD2O60548 495 aaPredicted RBP20.11■□□□□ 0.81
NUP43-205ENST00000463048 BANF1O75531 89 aa20.11■□□□□ 0.81
NUP43-205ENST00000463048 SLC25A14O95258 325 aaPredicted RBP20.11■□□□□ 0.81
NUP43-205ENST00000463048 PRAMEF1O95521 474 aa20.11■□□□□ 0.81
NUP43-205ENST00000463048 JUNDP17535 347 aa20.11■□□□□ 0.81
NUP43-205ENST00000463048 MC4RP32245 332 aa20.11■□□□□ 0.81
NUP43-205ENST00000463048 ARRB1P49407 418 aaPredicted RBP20.11■□□□□ 0.81
NUP43-205ENST00000463048 CCT8P50990 548 aa20.11■□□□□ 0.81
NUP43-205ENST00000463048 ARSDP51689 593 aa20.11■□□□□ 0.81
NUP43-205ENST00000463048 SRP54P61011 504 aaKnown RBP20.11■□□□□ 0.81
NUP43-205ENST00000463048 PPARDQ03181 441 aa20.11■□□□□ 0.81
NUP43-205ENST00000463048 TSTD2Q5T7W7 516 aa20.11■□□□□ 0.81
NUP43-205ENST00000463048 C8orf74Q6P047 294 aa20.11■□□□□ 0.81
NUP43-205ENST00000463048 PCGF5Q86SE9 256 aa20.11■□□□□ 0.81
NUP43-205ENST00000463048 NLRP8Q86W28 1048 aa20.11■□□□□ 0.81
NUP43-205ENST00000463048 RAVER1Q8IY67 606 aaKnown RBP20.11■□□□□ 0.81
NUP43-205ENST00000463048 PHACTR4Q8IZ21 702 aa20.11■□□□□ 0.81
NUP43-205ENST00000463048 NOA1Q8NC60 698 aaKnown RBP20.11■□□□□ 0.81
NUP43-205ENST00000463048 OR56A4Q8NGH8 313 aa20.11■□□□□ 0.81
NUP43-205ENST00000463048 STYXQ8WUJ0 223 aa20.11■□□□□ 0.81
NUP43-205ENST00000463048 TBATAQ96M53 351 aa20.11■□□□□ 0.81
NUP43-205ENST00000463048 TRIM56Q9BRZ2 755 aaKnown RBP20.11■□□□□ 0.81
NUP43-205ENST00000463048 LRRC1Q9BTT6 524 aa20.11■□□□□ 0.81
NUP43-205ENST00000463048 CDH19Q9H159 772 aa20.11■□□□□ 0.81
NUP43-205ENST00000463048 ASB8Q9H765 288 aa20.11■□□□□ 0.81
NUP43-205ENST00000463048 NLE1Q9NVX2 485 aaPredicted RBP20.11■□□□□ 0.81
NUP43-205ENST00000463048 ANAPC5Q9UJX4 755 aa20.11■□□□□ 0.81
NUP43-205ENST00000463048 ZNF292O60281 2723 aa20.11■□□□□ 0.81
NUP43-205ENST00000463048 TDRD6O60522 2096 aaKnown RBP20.11■□□□□ 0.81
NUP43-205ENST00000463048 MROH6A6NGR9 719 aa20.1■□□□□ 0.81
NUP43-205ENST00000463048 TOR1BO14657 336 aa20.1■□□□□ 0.81
NUP43-205ENST00000463048 PPFIA2O75334 1257 aa20.1■□□□□ 0.81
NUP43-205ENST00000463048 PYGLP06737 847 aa20.1■□□□□ 0.81
NUP43-205ENST00000463048 PRSS56P0CW18 603 aa20.1■□□□□ 0.81
NUP43-205ENST00000463048 KELP23276 732 aa20.1■□□□□ 0.81
NUP43-205ENST00000463048 HADHAP40939 763 aa20.1■□□□□ 0.81
NUP43-205ENST00000463048 C1orf61Q13536 156 aa20.1■□□□□ 0.81
NUP43-205ENST00000463048 SKIDA1Q1XH10 827 aa20.1■□□□□ 0.81
NUP43-205ENST00000463048 ZRANB3Q5FWF4 1079 aa20.1■□□□□ 0.81
NUP43-205ENST00000463048 PCID2Q5JVF3 399 aa20.1■□□□□ 0.81
NUP43-205ENST00000463048 HP1BP3Q5SSJ5 553 aaPredicted RBP20.1■□□□□ 0.81
NUP43-205ENST00000463048 ZDHHC20Q5W0Z9 365 aa20.1■□□□□ 0.81
NUP43-205ENST00000463048 MCUQ8NE86 351 aa20.1■□□□□ 0.81
NUP43-205ENST00000463048 ZNF398Q8TD17 642 aa20.1■□□□□ 0.81
NUP43-205ENST00000463048 GLYATL1Q969I3 302 aa20.1■□□□□ 0.81
NUP43-205ENST00000463048 RANBP9Q96S59 729 aa20.1■□□□□ 0.81
NUP43-205ENST00000463048 ERP44Q9BS26 406 aa20.1■□□□□ 0.81
NUP43-205ENST00000463048 IL22Q9GZX6 179 aa20.1■□□□□ 0.81
NUP43-205ENST00000463048 ERVMER34-1Q9H9K5 563 aa20.1■□□□□ 0.81
NUP43-205ENST00000463048 XAB2Q9HCS7 855 aaKnown RBP20.1■□□□□ 0.81
NUP43-205ENST00000463048 UCKL1Q9NWZ5 548 aa20.1■□□□□ 0.81
NUP43-205ENST00000463048 NFKBIL1Q9UBC1 381 aaPredicted RBP20.1■□□□□ 0.81
NUP43-205ENST00000463048 APOBEC3BQ9UH17 382 aaKnown RBP20.1■□□□□ 0.81
NUP43-205ENST00000463048 TMPRSS11EQ9UL52 423 aa20.1■□□□□ 0.81
NUP43-205ENST00000463048 PRKAB1Q9Y478 270 aa20.1■□□□□ 0.81
NUP43-205ENST00000463048 KNL1Q8NG31 2342 aa20.1■□□□□ 0.81
NUP43-205ENST00000463048 FAM186AA6NE01 2351 aa20.09■□□□□ 0.81
NUP43-205ENST00000463048 AP3B1O00203 1094 aa20.09■□□□□ 0.81
NUP43-205ENST00000463048 ZNF500O60304 480 aaPredicted RBP20.09■□□□□ 0.81
NUP43-205ENST00000463048 SRP72O76094 671 aaKnown RBP20.09■□□□□ 0.81
NUP43-205ENST00000463048 SEC31AO94979 1220 aaKnown RBP20.09■□□□□ 0.81
NUP43-205ENST00000463048 RASGRP1O95267 797 aa20.09■□□□□ 0.81
NUP43-205ENST00000463048 CSF2P04141 144 aa20.09■□□□□ 0.81
NUP43-205ENST00000463048 CEACAM5P06731 702 aa20.09■□□□□ 0.81
NUP43-205ENST00000463048 NMBRP28336 390 aa20.09■□□□□ 0.81
NUP43-205ENST00000463048 TEAD1P28347 426 aa20.09■□□□□ 0.81
NUP43-205ENST00000463048 GNPDA1P46926 289 aa20.09■□□□□ 0.81
NUP43-205ENST00000463048 CDKN1CP49918 316 aaPredicted RBP20.09■□□□□ 0.81
NUP43-205ENST00000463048 XIAPP98170 497 aa20.09■□□□□ 0.81
NUP43-205ENST00000463048 PEX6Q13608 980 aa20.09■□□□□ 0.81
NUP43-205ENST00000463048 FNBP1LQ5T0N5 605 aa20.09■□□□□ 0.81
NUP43-205ENST00000463048 TAS2R42Q7RTR8 314 aa20.09■□□□□ 0.81
NUP43-205ENST00000463048 PHYKPLQ8IUZ5 450 aa20.09■□□□□ 0.81
NUP43-205ENST00000463048 OXR1Q8N573 874 aa20.09■□□□□ 0.81
NUP43-205ENST00000463048 LMX1AQ8TE12 382 aa20.09■□□□□ 0.81
NUP43-205ENST00000463048 NAT14Q8WUY8 206 aa20.09■□□□□ 0.81
NUP43-205ENST00000463048 BTN2A2Q8WVV5 523 aa20.09■□□□□ 0.81
NUP43-205ENST00000463048 HDAC10Q969S8 669 aa20.09■□□□□ 0.81
NUP43-205ENST00000463048 CDKN2AIPNLQ96HQ2 116 aa20.09■□□□□ 0.81
NUP43-205ENST00000463048 COX14Q96I36 57 aa20.09■□□□□ 0.81
NUP43-205ENST00000463048 FRMD8Q9BZ67 464 aaPredicted RBP20.09■□□□□ 0.81
NUP43-205ENST00000463048 SLC13A1Q9BZW2 595 aa20.09■□□□□ 0.81
NUP43-205ENST00000463048 OR2AG1Q9H205 316 aa20.09■□□□□ 0.81
NUP43-205ENST00000463048 CARS2Q9HA77 564 aaKnown RBP20.09■□□□□ 0.81
NUP43-205ENST00000463048 DNAAF2Q9NVR5 837 aaKnown RBP20.09■□□□□ 0.81
NUP43-205ENST00000463048 CRLS1Q9UJA2 301 aa20.09■□□□□ 0.81
NUP43-205ENST00000463048 APPL1Q9UKG1 709 aa20.09■□□□□ 0.81
NUP43-205ENST00000463048 UTP11Q9Y3A2 253 aaKnown RBP20.09■□□□□ 0.81
NUP43-205ENST00000463048 MAD1L1Q9Y6D9 718 aa20.09■□□□□ 0.81
NUP43-205ENST00000463048 SLC30A1Q9Y6M5 507 aa20.09■□□□□ 0.81
NUP43-205ENST00000463048 ZNF106Q9H2Y7 1883 aaKnown RBP20.08■□□□□ 0.81
NUP43-205ENST00000463048 PRSS38A1L453 326 aa20.08■□□□□ 0.81
NUP43-205ENST00000463048 CCDC162PA2VCL2 907 aa20.08■□□□□ 0.81
NUP43-205ENST00000463048 H3BM21 787 aa20.08■□□□□ 0.81
NUP43-205ENST00000463048 FFAR2O15552 330 aa20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms