RNA–Protein interactions for RNA: ENST00000462352.5

CPNE1-221, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-221ENST00000462352 CASC4Q6P4E1 433 aa11.71□□□□□ -0.53
CPNE1-221ENST00000462352 MICALCLQ6ZW33 695 aa11.71□□□□□ -0.53
CPNE1-221ENST00000462352 PARGQ86W56 976 aa11.71□□□□□ -0.53
CPNE1-221ENST00000462352 AGGF1Q8N302 714 aaeCLIP11.71□□□□□ -0.53
CPNE1-221ENST00000462352 GPR161Q8N6U8 529 aaKnown RBP11.71□□□□□ -0.53
CPNE1-221ENST00000462352 LRRN4CLQ8ND94 238 aa11.71□□□□□ -0.53
CPNE1-221ENST00000462352 OR2I1PQ8NGU4 316 aa11.71□□□□□ -0.53
CPNE1-221ENST00000462352 ZNF398Q8TD17 642 aa11.71□□□□□ -0.53
CPNE1-221ENST00000462352 PTCD2Q8WV60 388 aaKnown RBP11.71□□□□□ -0.53
CPNE1-221ENST00000462352 PEX13Q92968 403 aa11.71□□□□□ -0.53
CPNE1-221ENST00000462352 FAM122AQ96E09 287 aa11.71□□□□□ -0.53
CPNE1-221ENST00000462352 CDKN2AIPNLQ96HQ2 116 aa11.71□□□□□ -0.53
CPNE1-221ENST00000462352 COX14Q96I36 57 aa11.71□□□□□ -0.53
CPNE1-221ENST00000462352 HIC2Q96JB3 615 aa11.71□□□□□ -0.53
CPNE1-221ENST00000462352 SIGLEC10Q96LC7 697 aa11.71□□□□□ -0.53
CPNE1-221ENST00000462352 TBATAQ96M53 351 aa11.71□□□□□ -0.53
CPNE1-221ENST00000462352 WDR92Q96MX6 357 aa11.71□□□□□ -0.53
CPNE1-221ENST00000462352 PWWP2AQ96N64 755 aa11.71□□□□□ -0.53
CPNE1-221ENST00000462352 VPS35Q96QK1 796 aa11.71□□□□□ -0.53
CPNE1-221ENST00000462352 ELF4Q99607 663 aaPredicted RBP11.71□□□□□ -0.53
CPNE1-221ENST00000462352 EDEM2Q9BV94 578 aa11.71□□□□□ -0.53
CPNE1-221ENST00000462352 KIFC1Q9BW19 673 aa11.71□□□□□ -0.53
CPNE1-221ENST00000462352 GAREM1Q9H706 876 aa11.71□□□□□ -0.53
CPNE1-221ENST00000462352 SUDS3Q9H7L9 328 aaPredicted RBP11.71□□□□□ -0.53
CPNE1-221ENST00000462352 ERVMER34-1Q9H9K5 563 aa11.71□□□□□ -0.53
CPNE1-221ENST00000462352 UGT1A7Q9HAW7 530 aa11.71□□□□□ -0.53
CPNE1-221ENST00000462352 UGT1A10Q9HAW8 530 aa11.71□□□□□ -0.53
CPNE1-221ENST00000462352 UGT1A8Q9HAW9 530 aa11.71□□□□□ -0.53
CPNE1-221ENST00000462352 MRM3Q9HC36 420 aaKnown RBP11.71□□□□□ -0.53
CPNE1-221ENST00000462352 RXFP3Q9NSD7 469 aa11.71□□□□□ -0.53
CPNE1-221ENST00000462352 SLC2A6Q9UGQ3 507 aa11.71□□□□□ -0.53
CPNE1-221ENST00000462352 DMGDHQ9UI17 866 aaKnown RBP11.71□□□□□ -0.53
CPNE1-221ENST00000462352 PNMA8BQ9ULN7 279 aaPredicted RBP11.71□□□□□ -0.53
CPNE1-221ENST00000462352 SOX13Q9UN79 622 aa11.71□□□□□ -0.53
CPNE1-221ENST00000462352 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.71□□□□□ -0.53
CPNE1-221ENST00000462352 KNL1Q8NG31 2342 aa11.71□□□□□ -0.54
CPNE1-221ENST00000462352 GVINP1Q7Z2Y8 2422 aa11.7□□□□□ -0.54
CPNE1-221ENST00000462352 ESYT3A0FGR9 886 aa11.7□□□□□ -0.54
CPNE1-221ENST00000462352 BHMG1C9JSJ3 638 aaPredicted RBP11.7□□□□□ -0.54
CPNE1-221ENST00000462352 KELP23276 732 aa11.7□□□□□ -0.54
CPNE1-221ENST00000462352 NMBRP28336 390 aa11.7□□□□□ -0.54
CPNE1-221ENST00000462352 CA5AP35218 305 aa11.7□□□□□ -0.54
CPNE1-221ENST00000462352 PLA2G5P39877 138 aa11.7□□□□□ -0.54
CPNE1-221ENST00000462352 DRG2P55039 364 aaKnown RBP11.7□□□□□ -0.54
CPNE1-221ENST00000462352 GUCY2DQ02846 1103 aa11.7□□□□□ -0.54
CPNE1-221ENST00000462352 DHX9Q08211 1270 aaKnown RBP11.7□□□□□ -0.54
CPNE1-221ENST00000462352 EIF2B5Q13144 721 aaKnown RBP11.7□□□□□ -0.54
CPNE1-221ENST00000462352 BBS9Q3SYG4 887 aa11.7□□□□□ -0.54
CPNE1-221ENST00000462352 MSS51Q4VC12 460 aa11.7□□□□□ -0.54
CPNE1-221ENST00000462352 ZNF542PQ5EBM4 170 aa11.7□□□□□ -0.54
CPNE1-221ENST00000462352 DNAJC21Q5F1R6 531 aaKnown RBP11.7□□□□□ -0.54
CPNE1-221ENST00000462352 ARMC3Q5W041 872 aa11.7□□□□□ -0.54
CPNE1-221ENST00000462352 KCTD16Q68DU8 428 aa11.7□□□□□ -0.54
CPNE1-221ENST00000462352 ENPP7Q6UWV6 458 aa11.7□□□□□ -0.54
CPNE1-221ENST00000462352 CES3Q6UWW8 571 aa11.7□□□□□ -0.54
CPNE1-221ENST00000462352 TRIM74Q86UV6 250 aa11.7□□□□□ -0.54
CPNE1-221ENST00000462352 PHYKPLQ8IUZ5 450 aa11.7□□□□□ -0.54
CPNE1-221ENST00000462352 PDIK1LQ8N165 341 aa11.7□□□□□ -0.54
CPNE1-221ENST00000462352 OXR1Q8N573 874 aa11.7□□□□□ -0.54
CPNE1-221ENST00000462352 MINDY1Q8N5J2 469 aa11.7□□□□□ -0.54
CPNE1-221ENST00000462352 OR56A4Q8NGH8 313 aa11.7□□□□□ -0.54
CPNE1-221ENST00000462352 BTN2A2Q8WVV5 523 aa11.7□□□□□ -0.54
CPNE1-221ENST00000462352 SEC14L1Q92503 715 aa11.7□□□□□ -0.54
CPNE1-221ENST00000462352 ART4Q93070 314 aa11.7□□□□□ -0.54
CPNE1-221ENST00000462352 GLYATL1Q969I3 302 aa11.7□□□□□ -0.54
CPNE1-221ENST00000462352 HDAC10Q969S8 669 aa11.7□□□□□ -0.54
CPNE1-221ENST00000462352 MFSD3Q96ES6 412 aa11.7□□□□□ -0.54
CPNE1-221ENST00000462352 ASB8Q9H765 288 aa11.7□□□□□ -0.54
CPNE1-221ENST00000462352 IL21RQ9HBE5 538 aa11.7□□□□□ -0.54
CPNE1-221ENST00000462352 FGF22Q9HCT0 170 aa11.7□□□□□ -0.54
CPNE1-221ENST00000462352 ARFGAP3Q9NP61 516 aa11.7□□□□□ -0.54
CPNE1-221ENST00000462352 TREX1Q9NSU2 369 aa11.7□□□□□ -0.54
CPNE1-221ENST00000462352 SAMD15Q9P1V8 674 aa11.7□□□□□ -0.54
CPNE1-221ENST00000462352 KLQ9UEF7 1012 aa11.7□□□□□ -0.54
CPNE1-221ENST00000462352 TMPRSS11EQ9UL52 423 aa11.7□□□□□ -0.54
CPNE1-221ENST00000462352 OAS3Q9Y6K5 1087 aaKnown RBP11.7□□□□□ -0.54
CPNE1-221ENST00000462352 SLC30A1Q9Y6M5 507 aa11.7□□□□□ -0.54
CPNE1-221ENST00000462352 FAM186AA6NE01 2351 aa11.7□□□□□ -0.54
CPNE1-221ENST00000462352 ADAMTS9Q9P2N4 1935 aa11.7□□□□□ -0.54
CPNE1-221ENST00000462352 ZNF106Q9H2Y7 1883 aaKnown RBP11.7□□□□□ -0.54
CPNE1-221ENST00000462352 A0A1B0GTQ1 180 aa11.69□□□□□ -0.54
CPNE1-221ENST00000462352 FAM237BA0A1B0GVD1 139 aa11.69□□□□□ -0.54
CPNE1-221ENST00000462352 MAGEB16A2A368 324 aa11.69□□□□□ -0.54
CPNE1-221ENST00000462352 CCDC162PA2VCL2 907 aa11.69□□□□□ -0.54
CPNE1-221ENST00000462352 OR51F1A6NGY5 319 aa11.69□□□□□ -0.54
CPNE1-221ENST00000462352 AGAP14A8MT82 685 aa11.69□□□□□ -0.54
CPNE1-221ENST00000462352 CDX4O14627 284 aaPredicted RBP11.69□□□□□ -0.54
CPNE1-221ENST00000462352 TNFRSF10CO14798 259 aa11.69□□□□□ -0.54
CPNE1-221ENST00000462352 GDF9O60383 454 aa11.69□□□□□ -0.54
CPNE1-221ENST00000462352 DFNA5O60443 496 aa11.69□□□□□ -0.54
CPNE1-221ENST00000462352 BANF1O75531 89 aa11.69□□□□□ -0.54
CPNE1-221ENST00000462352 SLC25A14O95258 325 aaPredicted RBP11.69□□□□□ -0.54
CPNE1-221ENST00000462352 ASMTLO95671 621 aa11.69□□□□□ -0.54
CPNE1-221ENST00000462352 CSF2P04141 144 aa11.69□□□□□ -0.54
CPNE1-221ENST00000462352 CEACAM5P06731 702 aa11.69□□□□□ -0.54
CPNE1-221ENST00000462352 NME1P15531 152 aaKnown RBP11.69□□□□□ -0.54
CPNE1-221ENST00000462352 ITGALP20701 1170 aa11.69□□□□□ -0.54
CPNE1-221ENST00000462352 POLD2P49005 469 aa11.69□□□□□ -0.54
CPNE1-221ENST00000462352 ARRB1P49407 418 aaPredicted RBP11.69□□□□□ -0.54
CPNE1-221ENST00000462352 PLTPP55058 493 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms