RNA–Protein interactions for RNA: ENST00000461328.1

VARS-219, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-219ENST00000461328 HLA-DPA1P20036 260 aa15.28■□□□□ 0.04
VARS-219ENST00000461328 TBC1D25Q3MII6 688 aa15.28■□□□□ 0.04
VARS-219ENST00000461328 C14orf28Q4W4Y0 310 aa15.28■□□□□ 0.04
VARS-219ENST00000461328 C3orf38Q5JPI3 329 aa15.28■□□□□ 0.04
VARS-219ENST00000461328 SIRPB2Q5JXA9 342 aa15.28■□□□□ 0.04
VARS-219ENST00000461328 ZNF569Q5MCW4 686 aa15.28■□□□□ 0.04
VARS-219ENST00000461328 HENMT1Q5T8I9 393 aaKnown RBP15.28■□□□□ 0.04
VARS-219ENST00000461328 OGFOD3Q6PK18 319 aa15.28■□□□□ 0.04
VARS-219ENST00000461328 LRRC69Q6ZNQ3 347 aa15.28■□□□□ 0.04
VARS-219ENST00000461328 NLRP8Q86W28 1048 aa15.28■□□□□ 0.04
VARS-219ENST00000461328 LSMEM2Q8N112 164 aa15.28■□□□□ 0.04
VARS-219ENST00000461328 CCDC110Q8TBZ0 833 aa15.28■□□□□ 0.04
VARS-219ENST00000461328 BLOC1S5Q8TDH9 187 aa15.28■□□□□ 0.04
VARS-219ENST00000461328 PTCD2Q8WV60 388 aaKnown RBP15.28■□□□□ 0.04
VARS-219ENST00000461328 FGF11Q92914 225 aa15.28■□□□□ 0.04
VARS-219ENST00000461328 MRGPRX2Q96LB1 330 aa15.28■□□□□ 0.04
VARS-219ENST00000461328 SPATA13Q96N96 652 aa15.28■□□□□ 0.04
VARS-219ENST00000461328 OR2M4Q96R27 311 aa15.28■□□□□ 0.04
VARS-219ENST00000461328 FICDQ9BVA6 458 aa15.28■□□□□ 0.04
VARS-219ENST00000461328 CDH19Q9H159 772 aa15.28■□□□□ 0.04
VARS-219ENST00000461328 POLR1BQ9H9Y6 1135 aa15.28■□□□□ 0.04
VARS-219ENST00000461328 TRNAU1APQ9NX07 287 aaKnown RBP15.28■□□□□ 0.04
VARS-219ENST00000461328 RABGEF1Q9UJ41 708 aa15.28■□□□□ 0.04
VARS-219ENST00000461328 SLC17A4Q9Y2C5 497 aa15.28■□□□□ 0.04
VARS-219ENST00000461328 ENTPD2Q9Y5L3 495 aa15.28■□□□□ 0.04
VARS-219ENST00000461328 CASC3O15234 703 aaKnown RBP15.27■□□□□ 0.04
VARS-219ENST00000461328 NOBOXO60393 691 aa15.27■□□□□ 0.04
VARS-219ENST00000461328 FUCA1P04066 466 aa15.27■□□□□ 0.04
VARS-219ENST00000461328 RPLP0P05388 317 aaKnown RBP15.27■□□□□ 0.04
VARS-219ENST00000461328 PSMB4P28070 264 aa15.27■□□□□ 0.04
VARS-219ENST00000461328 EIF2S3P41091 472 aaKnown RBP15.27■□□□□ 0.04
VARS-219ENST00000461328 CHRNA4P43681 627 aa15.27■□□□□ 0.04
VARS-219ENST00000461328 ABCG1P45844 678 aa15.27■□□□□ 0.04
VARS-219ENST00000461328 LSSP48449 732 aa15.27■□□□□ 0.04
VARS-219ENST00000461328 CCL7P80098 99 aa15.27■□□□□ 0.04
VARS-219ENST00000461328 CCZ1BP86790 482 aa15.27■□□□□ 0.04
VARS-219ENST00000461328 CCZ1P86791 482 aaPredicted RBP15.27■□□□□ 0.04
VARS-219ENST00000461328 RPS6KA1Q15418 735 aa15.27■□□□□ 0.04
VARS-219ENST00000461328 SLC1A5Q15758 541 aa15.27■□□□□ 0.04
VARS-219ENST00000461328 ANKRD20A2Q5SQ80 823 aa15.27■□□□□ 0.04
VARS-219ENST00000461328 CERCAMQ5T4B2 595 aa15.27■□□□□ 0.04
VARS-219ENST00000461328 ANKRD20A1Q5TYW2 823 aa15.27■□□□□ 0.04
VARS-219ENST00000461328 ANKRD20A3Q5VUR7 823 aa15.27■□□□□ 0.04
VARS-219ENST00000461328 SLC30A9Q6PML9 568 aa15.27■□□□□ 0.04
VARS-219ENST00000461328 ARHGEF18Q6ZSZ5 1173 aa15.27■□□□□ 0.04
VARS-219ENST00000461328 GLT6D1Q7Z4J2 308 aa15.27■□□□□ 0.04
VARS-219ENST00000461328 GALNT13Q8IUC8 556 aa15.27■□□□□ 0.04
VARS-219ENST00000461328 CCNJLQ8IV13 435 aa15.27■□□□□ 0.04
VARS-219ENST00000461328 SFTPA2Q8IWL1 248 aa15.27■□□□□ 0.04
VARS-219ENST00000461328 SNIP1Q8TAD8 396 aaKnown RBP15.27■□□□□ 0.04
VARS-219ENST00000461328 GPBAR1Q8TDU6 330 aa15.27■□□□□ 0.04
VARS-219ENST00000461328 LRRC45Q96CN5 670 aa15.27■□□□□ 0.04
VARS-219ENST00000461328 GFM1Q96RP9 751 aaKnown RBP15.27■□□□□ 0.04
VARS-219ENST00000461328 ZSCAN5AQ9BUG6 496 aa15.27■□□□□ 0.04
VARS-219ENST00000461328 TAAR2Q9P1P5 351 aa15.27■□□□□ 0.04
VARS-219ENST00000461328 SATB2Q9UPW6 733 aa15.27■□□□□ 0.04
VARS-219ENST00000461328 SPO11Q9Y5K1 396 aa15.27■□□□□ 0.04
VARS-219ENST00000461328 ASXL3Q9C0F0 2248 aa15.27■□□□□ 0.03
VARS-219ENST00000461328 ADAMTS20P59510 1910 aa15.26■□□□□ 0.03
VARS-219ENST00000461328 LOC285095A0A1B0GVY8 99 aa15.26■□□□□ 0.03
VARS-219ENST00000461328 FADS2P1A8MWK0 482 aa15.26■□□□□ 0.03
VARS-219ENST00000461328 NTN3O00634 580 aaPredicted RBP15.26■□□□□ 0.03
VARS-219ENST00000461328 EPOP01588 193 aa15.26■□□□□ 0.03
VARS-219ENST00000461328 ATP1A1P05023 1023 aaKnown RBP15.26■□□□□ 0.03
VARS-219ENST00000461328 FGF1P05230 155 aa15.26■□□□□ 0.03
VARS-219ENST00000461328 AK4P27144 223 aaPredicted RBP15.26■□□□□ 0.03
VARS-219ENST00000461328 ADCY8P40145 1251 aa15.26■□□□□ 0.03
VARS-219ENST00000461328 DCDC1P59894 354 aa15.26■□□□□ 0.03
VARS-219ENST00000461328 BIRC2Q13490 618 aa15.26■□□□□ 0.03
VARS-219ENST00000461328 PEX6Q13608 980 aa15.26■□□□□ 0.03
VARS-219ENST00000461328 FOXR1Q6PIV2 292 aa15.26■□□□□ 0.03
VARS-219ENST00000461328 TMC3Q7Z5M5 1100 aa15.26■□□□□ 0.03
VARS-219ENST00000461328 NRROSQ86YC3 692 aa15.26■□□□□ 0.03
VARS-219ENST00000461328 Q8N9G6 341 aaPredicted RBP15.26■□□□□ 0.03
VARS-219ENST00000461328 FAM71DQ8N9W8 422 aa15.26■□□□□ 0.03
VARS-219ENST00000461328 GPR26Q8NDV2 337 aa15.26■□□□□ 0.03
VARS-219ENST00000461328 ZDHHC1Q8WTX9 485 aa15.26■□□□□ 0.03
VARS-219ENST00000461328 EID2BQ96D98 161 aa15.26■□□□□ 0.03
VARS-219ENST00000461328 COX14Q96I36 57 aa15.26■□□□□ 0.03
VARS-219ENST00000461328 ZNF578Q96N58 590 aaPredicted RBP15.26■□□□□ 0.03
VARS-219ENST00000461328 PPP1R2P1Q96PQ5 205 aa15.26■□□□□ 0.03
VARS-219ENST00000461328 WDR24Q96S15 920 aa15.26■□□□□ 0.03
VARS-219ENST00000461328 LRRN3Q9H3W5 708 aa15.26■□□□□ 0.03
VARS-219ENST00000461328 TRABDQ9H4I3 376 aa15.26■□□□□ 0.03
VARS-219ENST00000461328 BPIFA1Q9NP55 256 aa15.26■□□□□ 0.03
VARS-219ENST00000461328 SPATS2LQ9NUQ6 558 aaKnown RBP15.26■□□□□ 0.03
VARS-219ENST00000461328 HACD3Q9P035 362 aa15.26■□□□□ 0.03
VARS-219ENST00000461328 LRIT1Q9P2V4 623 aa15.26■□□□□ 0.03
VARS-219ENST00000461328 R3HDM2Q9Y2K5 976 aaKnown RBP15.26■□□□□ 0.03
VARS-219ENST00000461328 AAR2Q9Y312 384 aaKnown RBP15.26■□□□□ 0.03
VARS-219ENST00000461328 RNF215Q9Y6U7 377 aa15.26■□□□□ 0.03
VARS-219ENST00000461328 URB1O60287 2271 aaKnown RBP15.26■□□□□ 0.03
VARS-219ENST00000461328 COL27A1Q8IZC6 1860 aaPredicted RBP15.25■□□□□ 0.03
VARS-219ENST00000461328 TCRBV7S2A1N4TA0A589 114 aa15.25■□□□□ 0.03
VARS-219ENST00000461328 D6RAR5 112 aa15.25■□□□□ 0.03
VARS-219ENST00000461328 AURKAO14965 403 aa15.25■□□□□ 0.03
VARS-219ENST00000461328 NUDT21O43809 227 aaKnown RBP15.25■□□□□ 0.03
VARS-219ENST00000461328 DXOO77932 396 aaKnown RBP15.25■□□□□ 0.03
VARS-219ENST00000461328 PNLIPP16233 465 aa15.25■□□□□ 0.03
VARS-219ENST00000461328 RBMS1P29558 406 aaKnown RBP15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms