RNA–Protein interactions for RNA: ENST00000460211.5

ATG4B-213, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 871 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-213ENST00000460211 SPATA16Q9BXB7 569 aa14.85□□□□□ -0.03
ATG4B-213ENST00000460211 GSDMCQ9BYG8 508 aa14.85□□□□□ -0.03
ATG4B-213ENST00000460211 TMEM168Q9H0V1 697 aa14.85□□□□□ -0.03
ATG4B-213ENST00000460211 TRNAU1APQ9NX07 287 aaKnown RBP14.85□□□□□ -0.03
ATG4B-213ENST00000460211 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.85□□□□□ -0.03
ATG4B-213ENST00000460211 GULP1Q9UBP9 304 aa14.85□□□□□ -0.03
ATG4B-213ENST00000460211 SUFUQ9UMX1 484 aa14.85□□□□□ -0.03
ATG4B-213ENST00000460211 A0A087WV48 116 aa14.84□□□□□ -0.03
ATG4B-213ENST00000460211 EME2A4GXA9 379 aaPredicted RBP14.84□□□□□ -0.03
ATG4B-213ENST00000460211 PSMD3O43242 534 aa14.84□□□□□ -0.03
ATG4B-213ENST00000460211 ZSCAN12O43309 604 aa14.84□□□□□ -0.03
ATG4B-213ENST00000460211 SOD1P00441 154 aa14.84□□□□□ -0.03
ATG4B-213ENST00000460211 CELA2BP08218 269 aaPredicted RBP14.84□□□□□ -0.03
ATG4B-213ENST00000460211 ITPKBP27987 946 aa14.84□□□□□ -0.03
ATG4B-213ENST00000460211 ACTN2P35609 894 aa14.84□□□□□ -0.03
ATG4B-213ENST00000460211 HMGCLP35914 325 aa14.84□□□□□ -0.03
ATG4B-213ENST00000460211 ABCG1P45844 678 aa14.84□□□□□ -0.03
ATG4B-213ENST00000460211 TCEA2Q15560 299 aa14.84□□□□□ -0.03
ATG4B-213ENST00000460211 PARP6Q2NL67 630 aa14.84□□□□□ -0.03
ATG4B-213ENST00000460211 P3H1Q32P28 736 aa14.84□□□□□ -0.03
ATG4B-213ENST00000460211 ZNF569Q5MCW4 686 aa14.84□□□□□ -0.03
ATG4B-213ENST00000460211 ALS2CLQ60I27 953 aa14.84□□□□□ -0.03
ATG4B-213ENST00000460211 PDPK2PQ6A1A2 396 aa14.84□□□□□ -0.03
ATG4B-213ENST00000460211 GLT6D1Q7Z4J2 308 aa14.84□□□□□ -0.03
ATG4B-213ENST00000460211 FAM46DQ8NEK8 389 aa14.84□□□□□ -0.03
ATG4B-213ENST00000460211 OR6C4Q8NGE1 309 aa14.84□□□□□ -0.03
ATG4B-213ENST00000460211 SLC35B2Q8TB61 432 aa14.84□□□□□ -0.03
ATG4B-213ENST00000460211 IFI44Q8TCB0 444 aa14.84□□□□□ -0.03
ATG4B-213ENST00000460211 BLOC1S5Q8TDH9 187 aa14.84□□□□□ -0.03
ATG4B-213ENST00000460211 AGAP2Q99490 1192 aa14.84□□□□□ -0.03
ATG4B-213ENST00000460211 FICDQ9BVA6 458 aa14.84□□□□□ -0.03
ATG4B-213ENST00000460211 DPEP2Q9H4A9 486 aa14.84□□□□□ -0.03
ATG4B-213ENST00000460211 SUDS3Q9H7L9 328 aaPredicted RBP14.84□□□□□ -0.03
ATG4B-213ENST00000460211 SIRPGQ9P1W8 387 aa14.84□□□□□ -0.03
ATG4B-213ENST00000460211 NFKBIL1Q9UBC1 381 aaPredicted RBP14.84□□□□□ -0.03
ATG4B-213ENST00000460211 PADI4Q9UM07 663 aa14.84□□□□□ -0.03
ATG4B-213ENST00000460211 R3HDM2Q9Y2K5 976 aaKnown RBP14.84□□□□□ -0.03
ATG4B-213ENST00000460211 TMEM98Q9Y2Y6 226 aa14.84□□□□□ -0.03
ATG4B-213ENST00000460211 PKP3Q9Y446 797 aa14.84□□□□□ -0.03
ATG4B-213ENST00000460211 ASXL3Q9C0F0 2248 aa14.84□□□□□ -0.03
ATG4B-213ENST00000460211 TCRBV7S2A1N4TA0A589 114 aa14.83□□□□□ -0.04
ATG4B-213ENST00000460211 PPFIA2O75334 1257 aa14.83□□□□□ -0.04
ATG4B-213ENST00000460211 AGTP01019 485 aa14.83□□□□□ -0.04
ATG4B-213ENST00000460211 MYF5P13349 255 aa14.83□□□□□ -0.04
ATG4B-213ENST00000460211 MSNP26038 577 aaKnown RBP14.83□□□□□ -0.04
ATG4B-213ENST00000460211 CHRNA4P43681 627 aa14.83□□□□□ -0.04
ATG4B-213ENST00000460211 HES3Q5TGS1 186 aa14.83□□□□□ -0.04
ATG4B-213ENST00000460211 EFL1Q7Z2Z2 1120 aaKnown RBP14.83□□□□□ -0.04
ATG4B-213ENST00000460211 GALNT13Q8IUC8 556 aa14.83□□□□□ -0.04
ATG4B-213ENST00000460211 SLC35F3Q8IY50 421 aa14.83□□□□□ -0.04
ATG4B-213ENST00000460211 TRAM1L1Q8N609 369 aa14.83□□□□□ -0.04
ATG4B-213ENST00000460211 MAPK15Q8TD08 544 aa14.83□□□□□ -0.04
ATG4B-213ENST00000460211 GPBAR1Q8TDU6 330 aa14.83□□□□□ -0.04
ATG4B-213ENST00000460211 EID2BQ96D98 161 aa14.83□□□□□ -0.04
ATG4B-213ENST00000460211 SCARF2Q96GP6 870 aaPredicted RBP14.83□□□□□ -0.04
ATG4B-213ENST00000460211 COX14Q96I36 57 aa14.83□□□□□ -0.04
ATG4B-213ENST00000460211 PLEKHG4BQ96PX9 1271 aa14.83□□□□□ -0.04
ATG4B-213ENST00000460211 OR2M4Q96R27 311 aa14.83□□□□□ -0.04
ATG4B-213ENST00000460211 WDR24Q96S15 920 aa14.83□□□□□ -0.04
ATG4B-213ENST00000460211 TMEM121Q9BTD3 319 aa14.83□□□□□ -0.04
ATG4B-213ENST00000460211 RMI1Q9H9A7 625 aa14.83□□□□□ -0.04
ATG4B-213ENST00000460211 VPS18Q9P253 973 aa14.83□□□□□ -0.04
ATG4B-213ENST00000460211 FEZ2Q9UHY8 353 aaPredicted RBP14.83□□□□□ -0.04
ATG4B-213ENST00000460211 ZNF148Q9UQR1 794 aa14.83□□□□□ -0.04
ATG4B-213ENST00000460211 SPO11Q9Y5K1 396 aa14.83□□□□□ -0.04
ATG4B-213ENST00000460211 LY6G6EA0A0G2JKS1 128 aa14.82□□□□□ -0.04
ATG4B-213ENST00000460211 C2orf81A6NN90 581 aa14.82□□□□□ -0.04
ATG4B-213ENST00000460211 LIASO43766 372 aa14.82□□□□□ -0.04
ATG4B-213ENST00000460211 OPA1O60313 960 aa14.82□□□□□ -0.04
ATG4B-213ENST00000460211 SLC25A14O95258 325 aaPredicted RBP14.82□□□□□ -0.04
ATG4B-213ENST00000460211 BPIP17213 487 aa14.82□□□□□ -0.04
ATG4B-213ENST00000460211 ADCY8P40145 1251 aa14.82□□□□□ -0.04
ATG4B-213ENST00000460211 POLD2P49005 469 aa14.82□□□□□ -0.04
ATG4B-213ENST00000460211 PDE1BQ01064 536 aa14.82□□□□□ -0.04
ATG4B-213ENST00000460211 LRP8Q14114 963 aa14.82□□□□□ -0.04
ATG4B-213ENST00000460211 KCTD16Q68DU8 428 aa14.82□□□□□ -0.04
ATG4B-213ENST00000460211 GUSBP11Q6P575 273 aa14.82□□□□□ -0.04
ATG4B-213ENST00000460211 RANBP10Q6VN20 620 aa14.82□□□□□ -0.04
ATG4B-213ENST00000460211 NYAP1Q6ZVC0 841 aa14.82□□□□□ -0.04
ATG4B-213ENST00000460211 MARK2Q7KZI7 788 aaKnown RBP14.82□□□□□ -0.04
ATG4B-213ENST00000460211 TRIM74Q86UV6 250 aa14.82□□□□□ -0.04
ATG4B-213ENST00000460211 CACTIN-AS1Q8N1I8 211 aa14.82□□□□□ -0.04
ATG4B-213ENST00000460211 GPR26Q8NDV2 337 aa14.82□□□□□ -0.04
ATG4B-213ENST00000460211 WDR48Q8TAF3 677 aa14.82□□□□□ -0.04
ATG4B-213ENST00000460211 TBL1YQ9BQ87 522 aa14.82□□□□□ -0.04
ATG4B-213ENST00000460211 ZNHIT2Q9UHR6 403 aa14.82□□□□□ -0.04
ATG4B-213ENST00000460211 CNOT6Q9ULM6 557 aaKnown RBP14.82□□□□□ -0.04
ATG4B-213ENST00000460211 CLCA2Q9UQC9 943 aa14.82□□□□□ -0.04
ATG4B-213ENST00000460211 U3KQA8 63 aa14.82□□□□□ -0.04
ATG4B-213ENST00000460211 HELZ2Q9BYK8 2649 aaKnown RBP14.81□□□□□ -0.04
ATG4B-213ENST00000460211 FADS2P1A8MWK0 482 aa14.81□□□□□ -0.04
ATG4B-213ENST00000460211 AURKAO14965 403 aa14.81□□□□□ -0.04
ATG4B-213ENST00000460211 STX7O15400 261 aaKnown RBP14.81□□□□□ -0.04
ATG4B-213ENST00000460211 CRTAMO95727 393 aa14.81□□□□□ -0.04
ATG4B-213ENST00000460211 MT-CO3P00414 261 aa14.81□□□□□ -0.04
ATG4B-213ENST00000460211 ATP1A1P05023 1023 aaKnown RBP14.81□□□□□ -0.04
ATG4B-213ENST00000460211 SPAM1P38567 509 aa14.81□□□□□ -0.04
ATG4B-213ENST00000460211 INSM1Q01101 510 aaPredicted RBP14.81□□□□□ -0.04
ATG4B-213ENST00000460211 CTBSQ01459 385 aa14.81□□□□□ -0.04
ATG4B-213ENST00000460211 BIRC2Q13490 618 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms