RNA–Protein interactions for RNA: ENST00000460120.5

HPS3-202, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2 BASIC

Gene HPS3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-202ENST00000460120 CCDC97Q96F63 343 aaPredicted RBP18.05■□□□□ 0.48
HPS3-202ENST00000460120 TEX37Q96LM6 180 aa18.05■□□□□ 0.48
HPS3-202ENST00000460120 CASD1Q96PB1 797 aa18.05■□□□□ 0.48
HPS3-202ENST00000460120 TRIB3Q96RU7 358 aa18.05■□□□□ 0.48
HPS3-202ENST00000460120 DNMT3LQ9UJW3 386 aa18.05■□□□□ 0.48
HPS3-202ENST00000460120 AGO1Q9UL18 857 aaKnown RBP18.05■□□□□ 0.48
HPS3-202ENST00000460120 SQORQ9Y6N5 450 aa18.05■□□□□ 0.48
HPS3-202ENST00000460120 ANKRD12Q6UB98 2062 aa18.04■□□□□ 0.48
HPS3-202ENST00000460120 A0A1W2PQ45 241 aaPredicted RBP18.04■□□□□ 0.48
HPS3-202ENST00000460120 A0A1W2PQY0 241 aa18.04■□□□□ 0.48
HPS3-202ENST00000460120 FAM92AA1XBS5 289 aa18.04■□□□□ 0.48
HPS3-202ENST00000460120 A8MX80 341 aa18.04■□□□□ 0.48
HPS3-202ENST00000460120 NME4O00746 187 aa18.04■□□□□ 0.48
HPS3-202ENST00000460120 INPPL1O15357 1258 aa18.04■□□□□ 0.48
HPS3-202ENST00000460120 INSIG1O15503 277 aa18.04■□□□□ 0.48
HPS3-202ENST00000460120 ZNF140P52738 457 aaPredicted RBP18.04■□□□□ 0.48
HPS3-202ENST00000460120 FAM189BP81408 668 aa18.04■□□□□ 0.48
HPS3-202ENST00000460120 RHDQ02161 417 aa18.04■□□□□ 0.48
HPS3-202ENST00000460120 MRPL58Q14197 206 aaKnown RBP18.04■□□□□ 0.48
HPS3-202ENST00000460120 CWF19L1Q69YN2 538 aaKnown RBP18.04■□□□□ 0.48
HPS3-202ENST00000460120 RBM44Q6ZP01 1051 aaKnown RBP18.04■□□□□ 0.48
HPS3-202ENST00000460120 TICAM1Q8IUC6 712 aa18.04■□□□□ 0.48
HPS3-202ENST00000460120 CPNE9Q8IYJ1 553 aa18.04■□□□□ 0.48
HPS3-202ENST00000460120 MARVELD2Q8N4S9 558 aa18.04■□□□□ 0.48
HPS3-202ENST00000460120 EEF1AKMT1Q8WVE0 214 aa18.04■□□□□ 0.48
HPS3-202ENST00000460120 RAI2Q9Y5P3 530 aa18.04■□□□□ 0.48
HPS3-202ENST00000460120 FNDC1Q4ZHG4 1894 aaPredicted RBP18.04■□□□□ 0.48
HPS3-202ENST00000460120 COCHO43405 550 aa18.04■□□□□ 0.48
HPS3-202ENST00000460120 DENRO43583 198 aaKnown RBP18.04■□□□□ 0.48
HPS3-202ENST00000460120 MT-ND1P03886 318 aa18.04■□□□□ 0.48
HPS3-202ENST00000460120 SLC11A2P49281 568 aa18.04■□□□□ 0.48
HPS3-202ENST00000460120 ACVR1Q04771 509 aa18.04■□□□□ 0.48
HPS3-202ENST00000460120 LARP7Q4G0J3 582 aaKnown RBP eCLIP18.04■□□□□ 0.48
HPS3-202ENST00000460120 SAMD4BQ5PRF9 694 aaKnown RBP18.04■□□□□ 0.48
HPS3-202ENST00000460120 METTL25Q8N6Q8 603 aa18.04■□□□□ 0.48
HPS3-202ENST00000460120 STAG3L4Q8TBR4 150 aa18.04■□□□□ 0.48
HPS3-202ENST00000460120 TMEM181Q9P2C4 612 aa18.04■□□□□ 0.48
HPS3-202ENST00000460120 EIF2B4Q9UI10 523 aaKnown RBP18.04■□□□□ 0.48
HPS3-202ENST00000460120 STAMBPO95630 424 aa18.03■□□□□ 0.48
HPS3-202ENST00000460120 SPATA31D3P0C874 917 aa18.03■□□□□ 0.48
HPS3-202ENST00000460120 MTHFD1P11586 935 aaKnown RBP18.03■□□□□ 0.48
HPS3-202ENST00000460120 NCK1P16333 377 aa18.03■□□□□ 0.48
HPS3-202ENST00000460120 HMBOX1Q6NT76 420 aa18.03■□□□□ 0.48
HPS3-202ENST00000460120 SPATA31D4Q6ZUB0 917 aa18.03■□□□□ 0.48
HPS3-202ENST00000460120 GRIN3AQ8TCU5 1115 aa18.03■□□□□ 0.48
HPS3-202ENST00000460120 SCLYQ96I15 445 aa18.03■□□□□ 0.48
HPS3-202ENST00000460120 MGME1Q9BQP7 344 aa18.03■□□□□ 0.48
HPS3-202ENST00000460120 NLE1Q9NVX2 485 aaPredicted RBP18.03■□□□□ 0.48
HPS3-202ENST00000460120 CD274Q9NZQ7 290 aa18.03■□□□□ 0.48
HPS3-202ENST00000460120 RAB26Q9ULW5 256 aa18.03■□□□□ 0.48
HPS3-202ENST00000460120 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.03■□□□□ 0.48
HPS3-202ENST00000460120 C2orf78A6NCI8 922 aa18.03■□□□□ 0.48
HPS3-202ENST00000460120 C2orf81A6NN90 581 aa18.03■□□□□ 0.48
HPS3-202ENST00000460120 PDLIM1O00151 329 aa18.03■□□□□ 0.48
HPS3-202ENST00000460120 SNUPNO95149 360 aaKnown RBP18.03■□□□□ 0.48
HPS3-202ENST00000460120 PRLP01236 227 aa18.03■□□□□ 0.48
HPS3-202ENST00000460120 PSMC3P17980 439 aa18.03■□□□□ 0.48
HPS3-202ENST00000460120 CST5P28325 142 aaPredicted RBP18.03■□□□□ 0.48
HPS3-202ENST00000460120 ZNF177Q13360 481 aaPredicted RBP18.03■□□□□ 0.48
HPS3-202ENST00000460120 C11orf91Q3C1V1 193 aa18.03■□□□□ 0.48
HPS3-202ENST00000460120 RABL3Q5HYI8 236 aa18.03■□□□□ 0.48
HPS3-202ENST00000460120 ATXN7L2Q5T6C5 722 aaPredicted RBP18.03■□□□□ 0.48
HPS3-202ENST00000460120 SYVN1Q86TM6 617 aa18.03■□□□□ 0.48
HPS3-202ENST00000460120 CDYL2Q8N8U2 506 aa18.03■□□□□ 0.48
HPS3-202ENST00000460120 PCYOX1LQ8NBM8 494 aa18.03■□□□□ 0.48
HPS3-202ENST00000460120 CATSPER1Q8NEC5 780 aa18.03■□□□□ 0.48
HPS3-202ENST00000460120 FBXO22Q8NEZ5 403 aa18.03■□□□□ 0.48
HPS3-202ENST00000460120 LINGO1Q96FE5 620 aa18.03■□□□□ 0.48
HPS3-202ENST00000460120 TTPALQ9BTX7 342 aa18.03■□□□□ 0.48
HPS3-202ENST00000460120 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.03■□□□□ 0.48
HPS3-202ENST00000460120 CD300AQ9UGN4 299 aa18.03■□□□□ 0.48
HPS3-202ENST00000460120 USP22Q9UPT9 525 aa18.03■□□□□ 0.48
HPS3-202ENST00000460120 A0A1B0GVG6 124 aa18.02■□□□□ 0.48
HPS3-202ENST00000460120 E5RI56 91 aa18.02■□□□□ 0.48
HPS3-202ENST00000460120 FAM58BPP0C7Q3 252 aa18.02■□□□□ 0.48
HPS3-202ENST00000460120 ZNF26P17031 533 aaPredicted RBP18.02■□□□□ 0.48
HPS3-202ENST00000460120 ROR2Q01974 943 aaKnown RBP18.02■□□□□ 0.48
HPS3-202ENST00000460120 SEMG2Q02383 582 aa18.02■□□□□ 0.48
HPS3-202ENST00000460120 GALNT1Q10472 559 aaPredicted RBP18.02■□□□□ 0.48
HPS3-202ENST00000460120 PLD1Q13393 1074 aa18.02■□□□□ 0.48
HPS3-202ENST00000460120 TAF12Q16514 161 aa18.02■□□□□ 0.48
HPS3-202ENST00000460120 NADK2Q4G0N4 442 aa18.02■□□□□ 0.48
HPS3-202ENST00000460120 KANK2Q63ZY3 851 aa18.02■□□□□ 0.48
HPS3-202ENST00000460120 CARNMT1Q8N4J0 409 aa18.02■□□□□ 0.48
HPS3-202ENST00000460120 GPR150Q8NGU9 434 aa18.02■□□□□ 0.48
HPS3-202ENST00000460120 CD99L2Q8TCZ2 262 aa18.02■□□□□ 0.48
HPS3-202ENST00000460120 FATE1Q969F0 183 aa18.02■□□□□ 0.48
HPS3-202ENST00000460120 FUBP1Q96AE4 644 aaKnown RBP18.02■□□□□ 0.48
HPS3-202ENST00000460120 HGH1Q9BTY7 390 aa18.02■□□□□ 0.48
HPS3-202ENST00000460120 TM6SF2Q9BZW4 377 aa18.02■□□□□ 0.48
HPS3-202ENST00000460120 RNF38Q9H0F5 515 aa18.02■□□□□ 0.48
HPS3-202ENST00000460120 SLAMF8Q9P0V8 285 aa18.02■□□□□ 0.48
HPS3-202ENST00000460120 KERAO60938 352 aa18.02■□□□□ 0.48
HPS3-202ENST00000460120 PRAMEF12O95522 483 aa18.02■□□□□ 0.48
HPS3-202ENST00000460120 LBPP18428 481 aa18.02■□□□□ 0.48
HPS3-202ENST00000460120 NFKB2Q00653 900 aa18.02■□□□□ 0.48
HPS3-202ENST00000460120 RING1Q06587 406 aa18.02■□□□□ 0.48
HPS3-202ENST00000460120 LCP2Q13094 533 aa18.02■□□□□ 0.48
HPS3-202ENST00000460120 ANKS6Q68DC2 871 aa18.02■□□□□ 0.48
HPS3-202ENST00000460120 AFTPHQ6ULP2 937 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms