RNA–Protein interactions for RNA: ENST00000458530.1

VPS50-207, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-207ENST00000458530 GRAMD1AQ96CP6 724 aa8.92□□□□□ -0.98
VPS50-207ENST00000458530 ECHDC3Q96DC8 303 aa8.92□□□□□ -0.98
VPS50-207ENST00000458530 ATXN7L3BQ96GX2 97 aa8.92□□□□□ -0.98
VPS50-207ENST00000458530 CDKN2AIPNLQ96HQ2 116 aa8.92□□□□□ -0.98
VPS50-207ENST00000458530 PPP1R16AQ96I34 528 aa8.92□□□□□ -0.98
VPS50-207ENST00000458530 ELMO2Q96JJ3 720 aa8.92□□□□□ -0.98
VPS50-207ENST00000458530 ZFYVE19Q96K21 471 aa8.92□□□□□ -0.98
VPS50-207ENST00000458530 MRGPRX3Q96LB0 322 aa8.92□□□□□ -0.98
VPS50-207ENST00000458530 TBATAQ96M53 351 aa8.92□□□□□ -0.98
VPS50-207ENST00000458530 KLF6Q99612 283 aaPredicted RBP8.92□□□□□ -0.98
VPS50-207ENST00000458530 KXD1Q9BQD3 176 aa8.92□□□□□ -0.98
VPS50-207ENST00000458530 MCMBPQ9BTE3 642 aa8.92□□□□□ -0.98
VPS50-207ENST00000458530 SLC13A1Q9BZW2 595 aa8.92□□□□□ -0.98
VPS50-207ENST00000458530 BRD9Q9H8M2 597 aa8.92□□□□□ -0.98
VPS50-207ENST00000458530 POPDC3Q9HBV1 291 aa8.92□□□□□ -0.98
VPS50-207ENST00000458530 HPS4Q9NQG7 708 aa8.92□□□□□ -0.98
VPS50-207ENST00000458530 SLC17A6Q9P2U8 582 aa8.92□□□□□ -0.98
VPS50-207ENST00000458530 DKK3Q9UBP4 350 aa8.92□□□□□ -0.98
VPS50-207ENST00000458530 SUN2Q9UH99 717 aa8.92□□□□□ -0.98
VPS50-207ENST00000458530 GGT7Q9UJ14 662 aa8.92□□□□□ -0.98
VPS50-207ENST00000458530 SLC39A10Q9ULF5 831 aa8.92□□□□□ -0.98
VPS50-207ENST00000458530 PLLPQ9Y342 182 aa8.92□□□□□ -0.98
VPS50-207ENST00000458530 PPIL1Q9Y3C6 166 aa8.92□□□□□ -0.98
VPS50-207ENST00000458530 SPO11Q9Y5K1 396 aa8.92□□□□□ -0.98
VPS50-207ENST00000458530 IGF2RP11717 2491 aa8.91□□□□□ -0.98
VPS50-207ENST00000458530 FRYQ5TBA9 3013 aa8.91□□□□□ -0.98
VPS50-207ENST00000458530 A0A096LPK6 155 aa8.91□□□□□ -0.98
VPS50-207ENST00000458530 TSPAN11A1L157 253 aa8.91□□□□□ -0.98
VPS50-207ENST00000458530 HMX2A2RU54 273 aa8.91□□□□□ -0.98
VPS50-207ENST00000458530 CCDC162PA2VCL2 907 aa8.91□□□□□ -0.98
VPS50-207ENST00000458530 TBC1D3BA6NDS4 549 aa8.91□□□□□ -0.98
VPS50-207ENST00000458530 UPK3BL1B0FP48 263 aa8.91□□□□□ -0.98
VPS50-207ENST00000458530 UPK3BL2E5RIL1 263 aa8.91□□□□□ -0.98
VPS50-207ENST00000458530 C1QTNF3-AMACRE9PGA6 284 aa8.91□□□□□ -0.98
VPS50-207ENST00000458530 F8W8V4 182 aa8.91□□□□□ -0.98
VPS50-207ENST00000458530 GOLGA8TH3BQL2 631 aa8.91□□□□□ -0.98
VPS50-207ENST00000458530 BIRC5O15392 142 aa8.91□□□□□ -0.98
VPS50-207ENST00000458530 LAMTOR5O43504 91 aa8.91□□□□□ -0.98
VPS50-207ENST00000458530 LRP3O75074 770 aa8.91□□□□□ -0.98
VPS50-207ENST00000458530 H2AFYO75367 372 aaKnown RBP8.91□□□□□ -0.98
VPS50-207ENST00000458530 NDUFS3O75489 264 aa8.91□□□□□ -0.98
VPS50-207ENST00000458530 ZNF821O75541 412 aaPredicted RBP8.91□□□□□ -0.98
VPS50-207ENST00000458530 AHSGP02765 367 aa8.91□□□□□ -0.98
VPS50-207ENST00000458530 PRKCGP05129 697 aa8.91□□□□□ -0.98
VPS50-207ENST00000458530 UGT2B4P06133 528 aa8.91□□□□□ -0.98
VPS50-207ENST00000458530 PYGLP06737 847 aa8.91□□□□□ -0.98
VPS50-207ENST00000458530 MC4RP32245 332 aa8.91□□□□□ -0.98
VPS50-207ENST00000458530 SPAM1P38567 509 aa8.91□□□□□ -0.98
VPS50-207ENST00000458530 SLC26A3P40879 764 aa8.91□□□□□ -0.98
VPS50-207ENST00000458530 GRIA2P42262 883 aa8.91□□□□□ -0.98
VPS50-207ENST00000458530 ARSDP51689 593 aa8.91□□□□□ -0.98
VPS50-207ENST00000458530 TMPRSS15P98073 1019 aa8.91□□□□□ -0.98
VPS50-207ENST00000458530 MPP1Q00013 466 aa8.91□□□□□ -0.98
VPS50-207ENST00000458530 GUCA2AQ02747 115 aa8.91□□□□□ -0.98
VPS50-207ENST00000458530 CSTF1Q05048 431 aaKnown RBP8.91□□□□□ -0.98
VPS50-207ENST00000458530 ASPHQ12797 758 aa8.91□□□□□ -0.98
VPS50-207ENST00000458530 CTBP1Q13363 440 aa8.91□□□□□ -0.98
VPS50-207ENST00000458530 GRM2Q14416 872 aa8.91□□□□□ -0.98
VPS50-207ENST00000458530 ELAVL3Q14576 367 aaKnown RBP8.91□□□□□ -0.98
VPS50-207ENST00000458530 LRRC14Q15048 493 aa8.91□□□□□ -0.98
VPS50-207ENST00000458530 MLF2Q15773 248 aaPredicted RBP8.91□□□□□ -0.98
VPS50-207ENST00000458530 SMAD1Q15797 465 aaKnown RBP8.91□□□□□ -0.98
VPS50-207ENST00000458530 ZNF805Q5CZA5 627 aa8.91□□□□□ -0.98
VPS50-207ENST00000458530 ATG16L1Q676U5 607 aa8.91□□□□□ -0.98
VPS50-207ENST00000458530 ERAP2Q6P179 960 aa8.91□□□□□ -0.98
VPS50-207ENST00000458530 BRICD5Q6PL45 260 aa8.91□□□□□ -0.98
VPS50-207ENST00000458530 PARM1Q6UWI2 310 aa8.91□□□□□ -0.98
VPS50-207ENST00000458530 SH2D5Q6ZV89 423 aa8.91□□□□□ -0.98
VPS50-207ENST00000458530 ZNF771Q7L3S4 317 aaPredicted RBP8.91□□□□□ -0.98
VPS50-207ENST00000458530 LYSMD3Q7Z3D4 306 aa8.91□□□□□ -0.98
VPS50-207ENST00000458530 TBC1D1Q86TI0 1168 aaPredicted RBP8.91□□□□□ -0.98
VPS50-207ENST00000458530 C12orf40Q86WS4 652 aa8.91□□□□□ -0.98
VPS50-207ENST00000458530 SPATS2Q86XZ4 545 aaKnown RBP8.91□□□□□ -0.98
VPS50-207ENST00000458530 DENND6AQ8IWF6 608 aa8.91□□□□□ -0.98
VPS50-207ENST00000458530 RAVER1Q8IY67 606 aaKnown RBP8.91□□□□□ -0.98
VPS50-207ENST00000458530 CBARPQ8N350 705 aaPredicted RBP8.91□□□□□ -0.98
VPS50-207ENST00000458530 MDGA1Q8NFP4 955 aa8.91□□□□□ -0.98
VPS50-207ENST00000458530 OR13C4Q8NGS5 318 aa8.91□□□□□ -0.98
VPS50-207ENST00000458530 OR2A12Q8NGT7 310 aa8.91□□□□□ -0.98
VPS50-207ENST00000458530 RDH11Q8TC12 318 aa8.91□□□□□ -0.98
VPS50-207ENST00000458530 NETO1Q8TDF5 533 aa8.91□□□□□ -0.98
VPS50-207ENST00000458530 FRS2Q8WU20 508 aa8.91□□□□□ -0.98
VPS50-207ENST00000458530 CYB5D2Q8WUJ1 264 aa8.91□□□□□ -0.98
VPS50-207ENST00000458530 SCRN2Q96FV2 425 aa8.91□□□□□ -0.98
VPS50-207ENST00000458530 FAM111AQ96PZ2 611 aa8.91□□□□□ -0.98
VPS50-207ENST00000458530 MCCC1Q96RQ3 725 aaPredicted RBP8.91□□□□□ -0.98
VPS50-207ENST00000458530 PLCD4Q9BRC7 762 aa8.91□□□□□ -0.98
VPS50-207ENST00000458530 FAM126AQ9BYI3 521 aaPredicted RBP8.91□□□□□ -0.98
VPS50-207ENST00000458530 CDH19Q9H159 772 aa8.91□□□□□ -0.98
VPS50-207ENST00000458530 LTB4R2Q9NPC1 389 aa8.91□□□□□ -0.98
VPS50-207ENST00000458530 DYRK4Q9NR20 520 aa8.91□□□□□ -0.98
VPS50-207ENST00000458530 FBXO6Q9NRD1 293 aaPredicted RBP8.91□□□□□ -0.98
VPS50-207ENST00000458530 PKD2L2Q9NZM6 624 aa8.91□□□□□ -0.98
VPS50-207ENST00000458530 IL17CQ9P0M4 197 aa8.91□□□□□ -0.98
VPS50-207ENST00000458530 CAMSAP3Q9P1Y5 1249 aaPredicted RBP8.91□□□□□ -0.98
VPS50-207ENST00000458530 SLCO3A1Q9UIG8 710 aa8.91□□□□□ -0.98
VPS50-207ENST00000458530 MTO1Q9Y2Z2 717 aaKnown RBP8.91□□□□□ -0.98
VPS50-207ENST00000458530 ACOT9Q9Y305 439 aa8.91□□□□□ -0.98
VPS50-207ENST00000458530 PLXNB3Q9ULL4 1909 aa8.91□□□□□ -0.98
VPS50-207ENST00000458530 PIKFYVEQ9Y2I7 2098 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms