RNA–Protein interactions for RNA: ENST00000458038.5

CPNE1-220, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-220ENST00000458038 RBM22Q9NW64 420 aaKnown RBP eCLIP21.36■■□□□ 1.011e-6■■□□□ 12.7
CPNE1-220ENST00000458038 A0A1W2PQJ5 194 aa21.35■■□□□ 1.01
CPNE1-220ENST00000458038 OR5K4A6NMS3 321 aa21.35■■□□□ 1.01
CPNE1-220ENST00000458038 EFCAB7A8K855 629 aa21.35■■□□□ 1.01
CPNE1-220ENST00000458038 ZNF891A8MT65 544 aaPredicted RBP21.35■■□□□ 1.01
CPNE1-220ENST00000458038 CYP1A2P05177 515 aa21.35■■□□□ 1.01
CPNE1-220ENST00000458038 LIFP15018 202 aa21.35■■□□□ 1.01
CPNE1-220ENST00000458038 MX2P20592 715 aa21.35■■□□□ 1.01
CPNE1-220ENST00000458038 EPHA4P54764 986 aa21.35■■□□□ 1.01
CPNE1-220ENST00000458038 MC2RQ01718 297 aa21.35■■□□□ 1.01
CPNE1-220ENST00000458038 CLCA4Q14CN2 919 aa21.35■■□□□ 1.01
CPNE1-220ENST00000458038 PDK2Q15119 407 aa21.35■■□□□ 1.01
CPNE1-220ENST00000458038 HGSNATQ68CP4 663 aa21.35■■□□□ 1.01
CPNE1-220ENST00000458038 IYDQ6PHW0 289 aa21.35■■□□□ 1.01
CPNE1-220ENST00000458038 CEACAM20Q6UY09 585 aa21.35■■□□□ 1.01
CPNE1-220ENST00000458038 ARHGAP22Q7Z5H3 698 aa21.35■■□□□ 1.01
CPNE1-220ENST00000458038 SLC9B2Q86UD5 537 aa21.35■■□□□ 1.01
CPNE1-220ENST00000458038 TRIM74Q86UV6 250 aa21.35■■□□□ 1.01
CPNE1-220ENST00000458038 MAP7D3Q8IWC1 876 aa21.35■■□□□ 1.01
CPNE1-220ENST00000458038 BMPERQ8N8U9 685 aa21.35■■□□□ 1.01
CPNE1-220ENST00000458038 CCHCR1Q8TD31 782 aa21.35■■□□□ 1.01
CPNE1-220ENST00000458038 KIAA1143Q96AT1 154 aaPredicted RBP21.35■■□□□ 1.01
CPNE1-220ENST00000458038 IQCDQ96DY2 449 aa21.35■■□□□ 1.01
CPNE1-220ENST00000458038 SLC45A3Q96JT2 553 aa21.35■■□□□ 1.01
CPNE1-220ENST00000458038 NAP1L5Q96NT1 182 aaPredicted RBP21.35■■□□□ 1.01
CPNE1-220ENST00000458038 TRIT1Q9H3H1 467 aaKnown RBP21.35■■□□□ 1.01
CPNE1-220ENST00000458038 OCIAD1Q9NX40 245 aa21.35■■□□□ 1.01
CPNE1-220ENST00000458038 PILRAQ9UKJ1 303 aa21.35■■□□□ 1.01
CPNE1-220ENST00000458038 CHKBQ9Y259 395 aa21.35■■□□□ 1.01
CPNE1-220ENST00000458038 BSNQ9UPA5 3926 aa21.35■■□□□ 1.01
CPNE1-220ENST00000458038 KIR2DS5A0A0G2JLQ3 304 aa21.34■■□□□ 1.01
CPNE1-220ENST00000458038 A0A0G2JNG1 304 aa21.34■■□□□ 1.01
CPNE1-220ENST00000458038 A0A0U1RQS6 177 aa21.34■■□□□ 1.01
CPNE1-220ENST00000458038 KIR2DS3K7RE56 304 aa21.34■■□□□ 1.01
CPNE1-220ENST00000458038 INPP4BO15327 924 aa21.34■■□□□ 1.01
CPNE1-220ENST00000458038 MFSD11O43934 449 aa21.34■■□□□ 1.01
CPNE1-220ENST00000458038 RAD1O60671 282 aa21.34■■□□□ 1.01
CPNE1-220ENST00000458038 DNAJC6O75061 913 aa21.34■■□□□ 1.01
CPNE1-220ENST00000458038 MAP3K6O95382 1288 aa21.34■■□□□ 1.01
CPNE1-220ENST00000458038 SERPINC1P01008 464 aa21.34■■□□□ 1.01
CPNE1-220ENST00000458038 PRLP01236 227 aa21.34■■□□□ 1.01
CPNE1-220ENST00000458038 SERPING1P05155 500 aa21.34■■□□□ 1.01
CPNE1-220ENST00000458038 MPSTP25325 297 aa21.34■■□□□ 1.01
CPNE1-220ENST00000458038 SSR1P43307 286 aaKnown RBP21.34■■□□□ 1.01
CPNE1-220ENST00000458038 CCR10P46092 362 aa21.34■■□□□ 1.01
CPNE1-220ENST00000458038 MMRN1Q13201 1228 aa21.34■■□□□ 1.01
CPNE1-220ENST00000458038 KIR2DS5Q14953 304 aa21.34■■□□□ 1.01
CPNE1-220ENST00000458038 PMEPA1Q969W9 287 aa21.34■■□□□ 1.01
CPNE1-220ENST00000458038 AGAP2Q99490 1192 aa21.34■■□□□ 1.01
CPNE1-220ENST00000458038 ZNF670Q9BS34 389 aa21.34■■□□□ 1.01
CPNE1-220ENST00000458038 PCDH9Q9HC56 1237 aa21.34■■□□□ 1.01
CPNE1-220ENST00000458038 PKD2L2Q9NZM6 624 aa21.34■■□□□ 1.01
CPNE1-220ENST00000458038 TMEM9Q9P0T7 183 aa21.34■■□□□ 1.01
CPNE1-220ENST00000458038 NBASA2RRP1 2371 aa21.34■■□□□ 1.01
CPNE1-220ENST00000458038 TRBV23OR9-2A0A075B6M9 112 aa21.33■■□□□ 1.01
CPNE1-220ENST00000458038 CLDN7O95471 211 aa21.33■■□□□ 1.01
CPNE1-220ENST00000458038 NOP2P46087 812 aaKnown RBP21.33■■□□□ 1.01
CPNE1-220ENST00000458038 SPINT3P49223 89 aa21.33■■□□□ 1.01
CPNE1-220ENST00000458038 ARSEP51690 589 aa21.33■■□□□ 1.01
CPNE1-220ENST00000458038 NFKB2Q00653 900 aa21.33■■□□□ 1.01
CPNE1-220ENST00000458038 DSC2Q02487 901 aa21.33■■□□□ 1.01
CPNE1-220ENST00000458038 KCNAB2Q13303 367 aa21.33■■□□□ 1.01
CPNE1-220ENST00000458038 DPYSL3Q14195 570 aa21.33■■□□□ 1.01
CPNE1-220ENST00000458038 ANKRD20A8PQ5CZ79 823 aa21.33■■□□□ 1.01
CPNE1-220ENST00000458038 ANKS6Q68DC2 871 aa21.33■■□□□ 1.01
CPNE1-220ENST00000458038 NCBP2-AS2Q69YL0 99 aa21.33■■□□□ 1.01
CPNE1-220ENST00000458038 CHST15Q7LFX5 561 aaPredicted RBP21.33■■□□□ 1.01
CPNE1-220ENST00000458038 LYSMD3Q7Z3D4 306 aa21.33■■□□□ 1.01
CPNE1-220ENST00000458038 NLGN4XQ8N0W4 816 aa21.33■■□□□ 1.01
CPNE1-220ENST00000458038 KCTD6Q8NC69 237 aa21.33■■□□□ 1.01
CPNE1-220ENST00000458038 NLGN4YQ8NFZ3 816 aaPredicted RBP21.33■■□□□ 1.01
CPNE1-220ENST00000458038 ARRDC2Q8TBH0 407 aa21.33■■□□□ 1.01
CPNE1-220ENST00000458038 BTBD6Q96KE9 485 aa21.33■■□□□ 1.01
CPNE1-220ENST00000458038 ADGRE3Q9BY15 652 aa21.33■■□□□ 1.01
CPNE1-220ENST00000458038 SPRY4Q9C004 299 aa21.33■■□□□ 1.01
CPNE1-220ENST00000458038 TRIM4Q9C037 500 aa21.33■■□□□ 1.01
CPNE1-220ENST00000458038 FAM83DQ9H4H8 585 aa21.33■■□□□ 1.01
CPNE1-220ENST00000458038 LCMT1Q9UIC8 334 aa21.33■■□□□ 1.01
CPNE1-220ENST00000458038 CNOT6Q9ULM6 557 aaKnown RBP21.33■■□□□ 1.01
CPNE1-220ENST00000458038 TTLL3Q9Y4R7 772 aa21.33■■□□□ 1.01
CPNE1-220ENST00000458038 C1orf232A0A0U1RR37 186 aa21.32■■□□□ 1
CPNE1-220ENST00000458038 GPR89AB7ZAQ6 455 aa21.32■■□□□ 1
CPNE1-220ENST00000458038 CD48P09326 243 aa21.32■■□□□ 1
CPNE1-220ENST00000458038 GPR89BP0CG08 455 aa21.32■■□□□ 1
CPNE1-220ENST00000458038 CLCNKAP51800 687 aa21.32■■□□□ 1
CPNE1-220ENST00000458038 HENMT1Q5T8I9 393 aaKnown RBP21.32■■□□□ 1
CPNE1-220ENST00000458038 ZNF564Q8TBZ8 553 aaPredicted RBP21.32■■□□□ 1
CPNE1-220ENST00000458038 NCSTNQ92542 709 aa21.32■■□□□ 1
CPNE1-220ENST00000458038 RTP4Q96DX8 246 aa21.32■■□□□ 1
CPNE1-220ENST00000458038 MLPHQ9BV36 600 aaPredicted RBP21.32■■□□□ 1
CPNE1-220ENST00000458038 CARD9Q9H257 536 aa21.32■■□□□ 1
CPNE1-220ENST00000458038 GPN2Q9H9Y4 310 aaPredicted RBP21.32■■□□□ 1
CPNE1-220ENST00000458038 TMEM63CQ9P1W3 806 aa21.32■■□□□ 1
CPNE1-220ENST00000458038 TBC1D29Q9UFV1 150 aa21.32■■□□□ 1
CPNE1-220ENST00000458038 ANKRD66B4E2M5 251 aa21.31■■□□□ 1
CPNE1-220ENST00000458038 ATP1A1P05023 1023 aaKnown RBP21.31■■□□□ 1
CPNE1-220ENST00000458038 KRT7P08729 469 aa21.31■■□□□ 1
CPNE1-220ENST00000458038 F3P13726 295 aa21.31■■□□□ 1
CPNE1-220ENST00000458038 POLE2P56282 527 aa21.31■■□□□ 1
CPNE1-220ENST00000458038 ZBED6P86452 979 aa21.31■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms