RNA–Protein interactions for RNA: ENST00000457745.1

RIF1-208, Transcript of replication timing regulatory factor 1, humanhuman

TSL 1 (best)

Gene RIF1, Length 1,006 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-208ENST00000457745 NDRG2Q9UN36 371 aaKnown RBP8.69□□□□□ -1.02
RIF1-208ENST00000457745 PLA2G4CQ9UP65 541 aa8.69□□□□□ -1.02
RIF1-208ENST00000457745 PCYT1BQ9Y5K3 369 aaPredicted RBP8.69□□□□□ -1.02
RIF1-208ENST00000457745 ACTL7BQ9Y614 415 aa8.69□□□□□ -1.02
RIF1-208ENST00000457745 A0A096LPK6 155 aa8.68□□□□□ -1.02
RIF1-208ENST00000457745 A0A1W2PP55 124 aa8.68□□□□□ -1.02
RIF1-208ENST00000457745 WDR91A4D1P6 747 aa8.68□□□□□ -1.02
RIF1-208ENST00000457745 FAM47DPA6NHR8 397 aa8.68□□□□□ -1.02
RIF1-208ENST00000457745 A6NNZ2 444 aa8.68□□□□□ -1.02
RIF1-208ENST00000457745 H3BMM5 538 aa8.68□□□□□ -1.02
RIF1-208ENST00000457745 TIMM44O43615 452 aa8.68□□□□□ -1.02
RIF1-208ENST00000457745 MMP20O60882 483 aa8.68□□□□□ -1.02
RIF1-208ENST00000457745 PRAMEF1O95521 474 aa8.68□□□□□ -1.02
RIF1-208ENST00000457745 PROCP04070 461 aa8.68□□□□□ -1.02
RIF1-208ENST00000457745 ADRB3P13945 408 aa8.68□□□□□ -1.02
RIF1-208ENST00000457745 CA4P22748 312 aa8.68□□□□□ -1.02
RIF1-208ENST00000457745 TARSP26639 723 aaKnown RBP8.68□□□□□ -1.02
RIF1-208ENST00000457745 FMO4P31512 558 aa8.68□□□□□ -1.02
RIF1-208ENST00000457745 SPRP35270 261 aaPredicted RBP8.68□□□□□ -1.02
RIF1-208ENST00000457745 SPAM1P38567 509 aa8.68□□□□□ -1.02
RIF1-208ENST00000457745 TNFRSF4P43489 277 aa8.68□□□□□ -1.02
RIF1-208ENST00000457745 KCNC1P48547 511 aa8.68□□□□□ -1.02
RIF1-208ENST00000457745 LIG3P49916 1009 aa8.68□□□□□ -1.02
RIF1-208ENST00000457745 PFKPQ01813 784 aa8.68□□□□□ -1.02
RIF1-208ENST00000457745 SATB1Q01826 763 aa8.68□□□□□ -1.02
RIF1-208ENST00000457745 ELAVL3Q14576 367 aaKnown RBP8.68□□□□□ -1.02
RIF1-208ENST00000457745 CST6Q15828 149 aa8.68□□□□□ -1.02
RIF1-208ENST00000457745 SLC44A4Q53GD3 710 aa8.68□□□□□ -1.02
RIF1-208ENST00000457745 N4BP2L1Q5TBK1 243 aaPredicted RBP8.68□□□□□ -1.02
RIF1-208ENST00000457745 SEL1L3Q68CR1 1132 aa8.68□□□□□ -1.02
RIF1-208ENST00000457745 BRAT1Q6PJG6 821 aa8.68□□□□□ -1.02
RIF1-208ENST00000457745 LVRNQ6Q4G3 990 aa8.68□□□□□ -1.02
RIF1-208ENST00000457745 USP45Q70EL2 814 aa8.68□□□□□ -1.02
RIF1-208ENST00000457745 TTC7BQ86TV6 843 aa8.68□□□□□ -1.02
RIF1-208ENST00000457745 TRIM74Q86UV6 250 aa8.68□□□□□ -1.02
RIF1-208ENST00000457745 SERPINA9Q86WD7 417 aa8.68□□□□□ -1.02
RIF1-208ENST00000457745 RALGPS2Q86X27 583 aaPredicted RBP8.68□□□□□ -1.02
RIF1-208ENST00000457745 CLDN19Q8N6F1 224 aa8.68□□□□□ -1.02
RIF1-208ENST00000457745 PLA2G15Q8NCC3 412 aa8.68□□□□□ -1.02
RIF1-208ENST00000457745 MAFAQ8NHW3 353 aaPredicted RBP8.68□□□□□ -1.02
RIF1-208ENST00000457745 DNASE1L2Q92874 299 aa8.68□□□□□ -1.02
RIF1-208ENST00000457745 PEX13Q92968 403 aa8.68□□□□□ -1.02
RIF1-208ENST00000457745 PBXIP1Q96AQ6 731 aa8.68□□□□□ -1.02
RIF1-208ENST00000457745 NXNL1Q96CM4 212 aa8.68□□□□□ -1.02
RIF1-208ENST00000457745 RIOK2Q9BVS4 552 aaKnown RBP8.68□□□□□ -1.02
RIF1-208ENST00000457745 FOXQ1Q9C009 403 aa8.68□□□□□ -1.02
RIF1-208ENST00000457745 SSU72Q9NP77 194 aaKnown RBP8.68□□□□□ -1.02
RIF1-208ENST00000457745 SLC2A4RGQ9NR83 387 aa8.68□□□□□ -1.02
RIF1-208ENST00000457745 MKS1Q9NXB0 559 aa8.68□□□□□ -1.02
RIF1-208ENST00000457745 SUN2Q9UH99 717 aa8.68□□□□□ -1.02
RIF1-208ENST00000457745 CNOT6Q9ULM6 557 aaKnown RBP8.68□□□□□ -1.02
RIF1-208ENST00000457745 ZFR2Q9UPR6 939 aaKnown RBP8.68□□□□□ -1.02
RIF1-208ENST00000457745 FADS3Q9Y5Q0 445 aa8.68□□□□□ -1.02
RIF1-208ENST00000457745 GLYATL1P3A0A0U1RQE8 302 aa8.67□□□□□ -1.02
RIF1-208ENST00000457745 C2orf81A6NN90 581 aa8.67□□□□□ -1.02
RIF1-208ENST00000457745 AGAP14A8MT82 685 aa8.67□□□□□ -1.02
RIF1-208ENST00000457745 TARM1B6A8C7 271 aa8.67□□□□□ -1.02
RIF1-208ENST00000457745 G3V2L1 256 aa8.67□□□□□ -1.02
RIF1-208ENST00000457745 PLIN3O60664 434 aa8.67□□□□□ -1.02
RIF1-208ENST00000457745 KRT37O76014 449 aa8.67□□□□□ -1.02
RIF1-208ENST00000457745 KRT38O76015 456 aa8.67□□□□□ -1.02
RIF1-208ENST00000457745 TSPAN12O95859 305 aa8.67□□□□□ -1.02
RIF1-208ENST00000457745 PRNPP04156 253 aa8.67□□□□□ -1.02
RIF1-208ENST00000457745 CHRNB1P11230 501 aa8.67□□□□□ -1.02
RIF1-208ENST00000457745 SRFP11831 508 aa8.67□□□□□ -1.02
RIF1-208ENST00000457745 C6P13671 934 aa8.67□□□□□ -1.02
RIF1-208ENST00000457745 ITGB6P18564 788 aa8.67□□□□□ -1.02
RIF1-208ENST00000457745 PAMP19021 973 aa8.67□□□□□ -1.02
RIF1-208ENST00000457745 TAC1P20366 129 aa8.67□□□□□ -1.02
RIF1-208ENST00000457745 DRD4P21917 467 aa8.67□□□□□ -1.02
RIF1-208ENST00000457745 NTSR1P30989 418 aa8.67□□□□□ -1.02
RIF1-208ENST00000457745 LSP1P33241 339 aa8.67□□□□□ -1.02
RIF1-208ENST00000457745 NNMTP40261 264 aa8.67□□□□□ -1.02
RIF1-208ENST00000457745 CCR10P46092 362 aa8.67□□□□□ -1.02
RIF1-208ENST00000457745 GLRBP48167 497 aa8.67□□□□□ -1.02
RIF1-208ENST00000457745 SERPINB8P50452 374 aa8.67□□□□□ -1.02
RIF1-208ENST00000457745 CLCN5P51795 746 aa8.67□□□□□ -1.02
RIF1-208ENST00000457745 PPP2CBP62714 309 aa8.67□□□□□ -1.02
RIF1-208ENST00000457745 PPP2CAP67775 309 aa8.67□□□□□ -1.02
RIF1-208ENST00000457745 RAD51Q06609 339 aa8.67□□□□□ -1.02
RIF1-208ENST00000457745 NFATC2Q13469 925 aa8.67□□□□□ -1.02
RIF1-208ENST00000457745 TDGQ13569 410 aa8.67□□□□□ -1.02
RIF1-208ENST00000457745 USP10Q14694 798 aaKnown RBP8.67□□□□□ -1.02
RIF1-208ENST00000457745 PCLAFQ15004 111 aa8.67□□□□□ -1.02
RIF1-208ENST00000457745 MLF2Q15773 248 aaPredicted RBP8.67□□□□□ -1.02
RIF1-208ENST00000457745 HENMT1Q5T8I9 393 aaKnown RBP8.67□□□□□ -1.02
RIF1-208ENST00000457745 ARMC3Q5W041 872 aa8.67□□□□□ -1.02
RIF1-208ENST00000457745 FOXR1Q6PIV2 292 aa8.67□□□□□ -1.02
RIF1-208ENST00000457745 KIAA0408Q6ZU52 694 aa8.67□□□□□ -1.02
RIF1-208ENST00000457745 ERN2Q76MJ5 926 aaKnown RBP8.67□□□□□ -1.02
RIF1-208ENST00000457745 TAS2R42Q7RTR8 314 aa8.67□□□□□ -1.02
RIF1-208ENST00000457745 GALNT7Q86SF2 657 aa8.67□□□□□ -1.02
RIF1-208ENST00000457745 CROCCP2Q86T23 111 aa8.67□□□□□ -1.02
RIF1-208ENST00000457745 LRRC34Q8IZ02 419 aa8.67□□□□□ -1.02
RIF1-208ENST00000457745 PAF1Q8N7H5 531 aa8.67□□□□□ -1.02
RIF1-208ENST00000457745 SIDT2Q8NBJ9 832 aaKnown RBP8.67□□□□□ -1.02
RIF1-208ENST00000457745 ARMC2Q8NEN0 867 aa8.67□□□□□ -1.02
RIF1-208ENST00000457745 FLCNQ8NFG4 579 aa8.67□□□□□ -1.02
RIF1-208ENST00000457745 RPLP0P6Q8NHW5 317 aa8.67□□□□□ -1.02
RIF1-208ENST00000457745 UCMAQ8WVF2 138 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms