RNA–Protein interactions for RNA: ENST00000457422.6

CCDC43-202, Transcript of coiled-coil domain containing 43, humanhuman

TSL 1 (best) BASIC

Gene CCDC43, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-202ENST00000457422 EPHB3P54753 998 aa16.58■□□□□ 0.24
CCDC43-202ENST00000457422 LCP2Q13094 533 aa16.58■□□□□ 0.24
CCDC43-202ENST00000457422 TSNQ15631 228 aaKnown RBP16.58■□□□□ 0.24
CCDC43-202ENST00000457422 CTSL3PQ5NE16 218 aa16.58■□□□□ 0.24
CCDC43-202ENST00000457422 OGFRL1Q5TC84 451 aaPredicted RBP16.58■□□□□ 0.24
CCDC43-202ENST00000457422 PHYKPLQ8IUZ5 450 aa16.58■□□□□ 0.24
CCDC43-202ENST00000457422 DCAF4L2Q8NA75 395 aa16.58■□□□□ 0.24
CCDC43-202ENST00000457422 WFDC5Q8TCV5 224 aa16.58■□□□□ 0.24
CCDC43-202ENST00000457422 TWIST2Q8WVJ9 160 aa16.58■□□□□ 0.24
CCDC43-202ENST00000457422 KCNJ9Q92806 393 aa16.58■□□□□ 0.24
CCDC43-202ENST00000457422 FUBP1Q96AE4 644 aaKnown RBP16.58■□□□□ 0.24
CCDC43-202ENST00000457422 ALG14Q96F25 216 aa16.58■□□□□ 0.24
CCDC43-202ENST00000457422 RNF208Q9H0X6 261 aa16.58■□□□□ 0.24
CCDC43-202ENST00000457422 VCXQ9H320 206 aa16.58■□□□□ 0.24
CCDC43-202ENST00000457422 AKTIPQ9H8T0 292 aa16.58■□□□□ 0.24
CCDC43-202ENST00000457422 SUCOQ9UBS9 1254 aaKnown RBP16.58■□□□□ 0.24
CCDC43-202ENST00000457422 FCF1Q9Y324 198 aaKnown RBP16.58■□□□□ 0.24
CCDC43-202ENST00000457422 DENND4CQ5VZ89 1909 aa16.58■□□□□ 0.24
CCDC43-202ENST00000457422 NPEPPSL1A6NEC2 478 aa16.57■□□□□ 0.24
CCDC43-202ENST00000457422 OR1I1O60431 355 aa16.57■□□□□ 0.24
CCDC43-202ENST00000457422 ALDOCP09972 364 aaKnown RBP16.57■□□□□ 0.24
CCDC43-202ENST00000457422 CCL5P13501 91 aa16.57■□□□□ 0.24
CCDC43-202ENST00000457422 EEF1DP29692 281 aaKnown RBP16.57■□□□□ 0.24
CCDC43-202ENST00000457422 CSKP41240 450 aa16.57■□□□□ 0.24
CCDC43-202ENST00000457422 RPL26P61254 145 aaKnown RBP16.57■□□□□ 0.24
CCDC43-202ENST00000457422 RHOAP61586 193 aa16.57■□□□□ 0.24
CCDC43-202ENST00000457422 IRX1P78414 480 aaPredicted RBP16.57■□□□□ 0.24
CCDC43-202ENST00000457422 CLCQ05315 142 aa16.57■□□□□ 0.24
CCDC43-202ENST00000457422 TRIP10Q15642 601 aa16.57■□□□□ 0.24
CCDC43-202ENST00000457422 MMEL1Q495T6 779 aa16.57■□□□□ 0.24
CCDC43-202ENST00000457422 ATXN7L2Q5T6C5 722 aaPredicted RBP16.57■□□□□ 0.24
CCDC43-202ENST00000457422 LPCAT4Q643R3 524 aa16.57■□□□□ 0.24
CCDC43-202ENST00000457422 ANKS6Q68DC2 871 aa16.57■□□□□ 0.24
CCDC43-202ENST00000457422 CAPRIN2Q6IMN6 1127 aaKnown RBP16.57■□□□□ 0.24
CCDC43-202ENST00000457422 TMEM154Q6P9G4 183 aa16.57■□□□□ 0.24
CCDC43-202ENST00000457422 TXNDC11Q6PKC3 985 aa16.57■□□□□ 0.24
CCDC43-202ENST00000457422 RNF148Q8N7C7 305 aa16.57■□□□□ 0.24
CCDC43-202ENST00000457422 SNX31Q8N9S9 440 aa16.57■□□□□ 0.24
CCDC43-202ENST00000457422 ASB9Q96DX5 294 aa16.57■□□□□ 0.24
CCDC43-202ENST00000457422 SLC30A3Q99726 388 aa16.57■□□□□ 0.24
CCDC43-202ENST00000457422 IL17CQ9P0M4 197 aa16.57■□□□□ 0.24
CCDC43-202ENST00000457422 VPS51Q9UID3 782 aa16.57■□□□□ 0.24
CCDC43-202ENST00000457422 TRMT6Q9UJA5 497 aaKnown RBP16.57■□□□□ 0.24
CCDC43-202ENST00000457422 TMCO1Q9UM00 188 aa16.57■□□□□ 0.24
CCDC43-202ENST00000457422 ATP6AP2A0A1C7CYW4 349 aa16.57■□□□□ 0.24
CCDC43-202ENST00000457422 CDC7O00311 574 aa16.57■□□□□ 0.24
CCDC43-202ENST00000457422 NIPSNAP2O75323 286 aa16.57■□□□□ 0.24
CCDC43-202ENST00000457422 ATP6AP2O75787 350 aa16.57■□□□□ 0.24
CCDC43-202ENST00000457422 GPX3P22352 226 aa16.57■□□□□ 0.24
CCDC43-202ENST00000457422 MSX2P35548 267 aaPredicted RBP16.57■□□□□ 0.24
CCDC43-202ENST00000457422 PTGER3P43115 390 aa16.57■□□□□ 0.24
CCDC43-202ENST00000457422 APLP1P51693 650 aa16.57■□□□□ 0.24
CCDC43-202ENST00000457422 STX1BP61266 288 aa16.57■□□□□ 0.24
CCDC43-202ENST00000457422 AP1S1P61966 158 aa16.57■□□□□ 0.24
CCDC43-202ENST00000457422 ZXDBP98169 803 aa16.57■□□□□ 0.24
CCDC43-202ENST00000457422 SFT2D3Q587I9 215 aa16.57■□□□□ 0.24
CCDC43-202ENST00000457422 ZRANB3Q5FWF4 1079 aa16.57■□□□□ 0.24
CCDC43-202ENST00000457422 C8orf82Q6P1X6 216 aaPredicted RBP16.57■□□□□ 0.24
CCDC43-202ENST00000457422 DDX53Q86TM3 631 aaKnown RBP16.57■□□□□ 0.24
CCDC43-202ENST00000457422 STK40Q8N2I9 435 aa16.57■□□□□ 0.24
CCDC43-202ENST00000457422 ARL14EPQ8N8R7 260 aaPredicted RBP16.57■□□□□ 0.24
CCDC43-202ENST00000457422 CD200R1Q8TD46 325 aa16.57■□□□□ 0.24
CCDC43-202ENST00000457422 TRPC4APQ8TEL6 797 aa16.57■□□□□ 0.24
CCDC43-202ENST00000457422 BHMTQ93088 406 aa16.57■□□□□ 0.24
CCDC43-202ENST00000457422 C19orf43Q9BQ61 176 aa16.57■□□□□ 0.24
CCDC43-202ENST00000457422 IL21Q9HBE4 155 aa16.57■□□□□ 0.24
CCDC43-202ENST00000457422 MAGEE1Q9HCI5 957 aa16.57■□□□□ 0.24
CCDC43-202ENST00000457422 FBRSL1Q9HCM7 1045 aaKnown RBP16.57■□□□□ 0.24
CCDC43-202ENST00000457422 SCOCQ9UIL1 159 aa16.57■□□□□ 0.24
CCDC43-202ENST00000457422 TBX21Q9UL17 535 aa16.57■□□□□ 0.24
CCDC43-202ENST00000457422 DPPA5A6NC42 116 aa16.56■□□□□ 0.24
CCDC43-202ENST00000457422 PIP5K1BO14986 540 aa16.56■□□□□ 0.24
CCDC43-202ENST00000457422 TRIM24O15164 1050 aa16.56■□□□□ 0.24
CCDC43-202ENST00000457422 NRP2O60462 931 aa16.56■□□□□ 0.24
CCDC43-202ENST00000457422 ESR1P03372 595 aa16.56■□□□□ 0.24
CCDC43-202ENST00000457422 HDCP19113 662 aa16.56■□□□□ 0.24
CCDC43-202ENST00000457422 FOXA1P55317 472 aa16.56■□□□□ 0.24
CCDC43-202ENST00000457422 MRPS22P82650 360 aaKnown RBP16.56■□□□□ 0.24
CCDC43-202ENST00000457422 PABPC1LQ4VXU2 614 aaKnown RBP16.56■□□□□ 0.24
CCDC43-202ENST00000457422 TXNDC8Q6A555 127 aa16.56■□□□□ 0.24
CCDC43-202ENST00000457422 ITIH5Q86UX2 942 aa16.56■□□□□ 0.24
CCDC43-202ENST00000457422 FUNDC1Q8IVP5 155 aa16.56■□□□□ 0.24
CCDC43-202ENST00000457422 SIDT2Q8NBJ9 832 aaKnown RBP16.56■□□□□ 0.24
CCDC43-202ENST00000457422 TTC16Q8NEE8 873 aa16.56■□□□□ 0.24
CCDC43-202ENST00000457422 BHLHE22Q8NFJ8 381 aaPredicted RBP16.56■□□□□ 0.24
CCDC43-202ENST00000457422 ZNF711Q9Y462 761 aa16.56■□□□□ 0.24
CCDC43-202ENST00000457422 PCDHB9Q9Y5E1 797 aa16.56■□□□□ 0.24
CCDC43-202ENST00000457422 PTGDR2Q9Y5Y4 395 aa16.56■□□□□ 0.24
CCDC43-202ENST00000457422 CPQQ9Y646 472 aa16.56■□□□□ 0.24
CCDC43-202ENST00000457422 ZNF106Q9H2Y7 1883 aaKnown RBP16.56■□□□□ 0.24
CCDC43-202ENST00000457422 SCN8AQ9UQD0 1980 aa16.56■□□□□ 0.24
CCDC43-202ENST00000457422 CARNS1A5YM72 827 aa16.55■□□□□ 0.24
CCDC43-202ENST00000457422 BBIP1A8MTZ0 92 aa16.55■□□□□ 0.24
CCDC43-202ENST00000457422 BTN3A1O00481 513 aa16.55■□□□□ 0.24
CCDC43-202ENST00000457422 VPS4BO75351 444 aa16.55■□□□□ 0.24
CCDC43-202ENST00000457422 LAG3P18627 525 aa16.55■□□□□ 0.24
CCDC43-202ENST00000457422 HMGCLP35914 325 aa16.55■□□□□ 0.24
CCDC43-202ENST00000457422 MNX1P50219 401 aaPredicted RBP16.55■□□□□ 0.24
CCDC43-202ENST00000457422 DEFB103AP81534 67 aa16.55■□□□□ 0.24
CCDC43-202ENST00000457422 CDH18Q13634 790 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms