RNA–Protein interactions for RNA: ENST00000457264.5

MRPL55-222, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-222ENST00000457264 VPS18Q9P253 973 aa16.57■□□□□ 0.24
MRPL55-222ENST00000457264 TBC1D29Q9UFV1 150 aa16.57■□□□□ 0.24
MRPL55-222ENST00000457264 KLHL3Q9UH77 587 aa16.57■□□□□ 0.24
MRPL55-222ENST00000457264 SDK2Q58EX2 2172 aa16.56■□□□□ 0.24
MRPL55-222ENST00000457264 SNX2O60749 519 aa16.56■□□□□ 0.24
MRPL55-222ENST00000457264 DNAJC6O75061 913 aa16.56■□□□□ 0.24
MRPL55-222ENST00000457264 RARAP10276 462 aa16.56■□□□□ 0.24
MRPL55-222ENST00000457264 TCF4P15884 667 aa16.56■□□□□ 0.24
MRPL55-222ENST00000457264 TCN2P20062 427 aa16.56■□□□□ 0.24
MRPL55-222ENST00000457264 STC1P52823 247 aa16.56■□□□□ 0.24
MRPL55-222ENST00000457264 EPHA4P54764 986 aa16.56■□□□□ 0.24
MRPL55-222ENST00000457264 KLHL30Q0D2K2 578 aa16.56■□□□□ 0.24
MRPL55-222ENST00000457264 PIGHQ14442 188 aaPredicted RBP16.56■□□□□ 0.24
MRPL55-222ENST00000457264 STX1AQ16623 288 aa16.56■□□□□ 0.24
MRPL55-222ENST00000457264 C16orf46Q6P387 395 aa16.56■□□□□ 0.24
MRPL55-222ENST00000457264 RAVER1Q8IY67 606 aaKnown RBP16.56■□□□□ 0.24
MRPL55-222ENST00000457264 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.56■□□□□ 0.24
MRPL55-222ENST00000457264 STARD8Q92502 1023 aa16.56■□□□□ 0.24
MRPL55-222ENST00000457264 HERPUD2Q9BSE4 406 aa16.56■□□□□ 0.24
MRPL55-222ENST00000457264 EPB41L1Q9H4G0 881 aa16.56■□□□□ 0.24
MRPL55-222ENST00000457264 RMI1Q9H9A7 625 aa16.56■□□□□ 0.24
MRPL55-222ENST00000457264 PCDH18Q9HCL0 1135 aa16.56■□□□□ 0.24
MRPL55-222ENST00000457264 APMAPQ9HDC9 416 aa16.56■□□□□ 0.24
MRPL55-222ENST00000457264 LMBRD1Q9NUN5 540 aa16.56■□□□□ 0.24
MRPL55-222ENST00000457264 HAUS2Q9NVX0 235 aa16.56■□□□□ 0.24
MRPL55-222ENST00000457264 AIPL1Q9NZN9 384 aa16.56■□□□□ 0.24
MRPL55-222ENST00000457264 KCNK6Q9Y257 313 aa16.56■□□□□ 0.24
MRPL55-222ENST00000457264 CHKBQ9Y259 395 aa16.56■□□□□ 0.24
MRPL55-222ENST00000457264 TMEM184BQ9Y519 407 aaPredicted RBP16.56■□□□□ 0.24
MRPL55-222ENST00000457264 PTPN13Q12923 2485 aa16.56■□□□□ 0.24
MRPL55-222ENST00000457264 FLNCQ14315 2725 aa16.55■□□□□ 0.24
MRPL55-222ENST00000457264 ARHGEF17Q96PE2 2063 aaPredicted RBP16.55■□□□□ 0.24
MRPL55-222ENST00000457264 DDX3XO00571 662 aaKnown RBP eCLIP16.55■□□□□ 0.242e-7■■■■□ 21.3
MRPL55-222ENST00000457264 CLDN7O95471 211 aa16.55■□□□□ 0.24
MRPL55-222ENST00000457264 ACP5P13686 325 aa16.55■□□□□ 0.24
MRPL55-222ENST00000457264 CA4P22748 312 aa16.55■□□□□ 0.24
MRPL55-222ENST00000457264 OAS2P29728 719 aaKnown RBP16.55■□□□□ 0.24
MRPL55-222ENST00000457264 KRT81Q14533 505 aa16.55■□□□□ 0.24
MRPL55-222ENST00000457264 LACTB2Q53H82 288 aaPredicted RBP16.55■□□□□ 0.24
MRPL55-222ENST00000457264 CCDC122Q5T0U0 273 aa16.55■□□□□ 0.24
MRPL55-222ENST00000457264 LYSMD3Q7Z3D4 306 aa16.55■□□□□ 0.24
MRPL55-222ENST00000457264 PLXDC1Q8IUK5 500 aa16.55■□□□□ 0.24
MRPL55-222ENST00000457264 ESX1Q8N693 406 aa16.55■□□□□ 0.24
MRPL55-222ENST00000457264 AVL9Q8NBF6 648 aa16.55■□□□□ 0.24
MRPL55-222ENST00000457264 TEKT4Q8WW24 435 aa16.55■□□□□ 0.24
MRPL55-222ENST00000457264 TTLL3Q9Y4R7 772 aa16.55■□□□□ 0.24
MRPL55-222ENST00000457264 PCDHB3Q9Y5E6 796 aa16.55■□□□□ 0.24
MRPL55-222ENST00000457264 KIR2DS5A0A0G2JLQ3 304 aa16.54■□□□□ 0.24
MRPL55-222ENST00000457264 A0A0G2JNG1 304 aa16.54■□□□□ 0.24
MRPL55-222ENST00000457264 OR5K4A6NMS3 321 aa16.54■□□□□ 0.24
MRPL55-222ENST00000457264 KIR2DS3K7RE56 304 aa16.54■□□□□ 0.24
MRPL55-222ENST00000457264 GP1BBP13224 206 aa16.54■□□□□ 0.24
MRPL55-222ENST00000457264 F3P13726 295 aa16.54■□□□□ 0.24
MRPL55-222ENST00000457264 ZNF165P49910 485 aa16.54■□□□□ 0.24
MRPL55-222ENST00000457264 RPL26P61254 145 aaKnown RBP16.54■□□□□ 0.24
MRPL55-222ENST00000457264 DSC2Q02487 901 aa16.54■□□□□ 0.24
MRPL55-222ENST00000457264 FOXM1Q08050 763 aa16.54■□□□□ 0.24
MRPL55-222ENST00000457264 KIR2DS5Q14953 304 aa16.54■□□□□ 0.24
MRPL55-222ENST00000457264 CRTC2Q53ET0 693 aaPredicted RBP16.54■□□□□ 0.24
MRPL55-222ENST00000457264 TIGD7Q6NT04 549 aaPredicted RBP16.54■□□□□ 0.24
MRPL55-222ENST00000457264 HSD3B7Q9H2F3 369 aa16.54■□□□□ 0.24
MRPL55-222ENST00000457264 FAM83DQ9H4H8 585 aa16.54■□□□□ 0.24
MRPL55-222ENST00000457264 RBM22Q9NW64 420 aaKnown RBP eCLIP16.54■□□□□ 0.248e-13■■■□□ 15.5
MRPL55-222ENST00000457264 CPNE7Q9UBL6 633 aa16.54■□□□□ 0.24
MRPL55-222ENST00000457264 CNOT6Q9ULM6 557 aaKnown RBP16.54■□□□□ 0.24
MRPL55-222ENST00000457264 RPL26L1Q9UNX3 145 aaKnown RBP16.54■□□□□ 0.24
MRPL55-222ENST00000457264 KCTD3Q9Y597 815 aa16.54■□□□□ 0.24
MRPL55-222ENST00000457264 PCYT1BQ9Y5K3 369 aaPredicted RBP16.54■□□□□ 0.24
MRPL55-222ENST00000457264 OAS3Q9Y6K5 1087 aaKnown RBP16.54■□□□□ 0.24
MRPL55-222ENST00000457264 RPS6KL1Q9Y6S9 549 aa16.54■□□□□ 0.24
MRPL55-222ENST00000457264 C1orf232A0A0U1RR37 186 aa16.53■□□□□ 0.24
MRPL55-222ENST00000457264 PRR19A6NJB7 356 aa16.53■□□□□ 0.24
MRPL55-222ENST00000457264 MATN3O15232 486 aa16.53■□□□□ 0.24
MRPL55-222ENST00000457264 GARSP41250 739 aaKnown RBP16.53■□□□□ 0.24
MRPL55-222ENST00000457264 PRKCIP41743 596 aa16.53■□□□□ 0.24
MRPL55-222ENST00000457264 STAT5AP42229 794 aa16.53■□□□□ 0.24
MRPL55-222ENST00000457264 KLRB1Q12918 225 aa16.53■□□□□ 0.24
MRPL55-222ENST00000457264 MAP7Q14244 749 aa16.53■□□□□ 0.24
MRPL55-222ENST00000457264 TXNRD3NBQ6F5E7 133 aa16.53■□□□□ 0.24
MRPL55-222ENST00000457264 PHYKPLQ8IUZ5 450 aa16.53■□□□□ 0.24
MRPL55-222ENST00000457264 LPCAT1Q8NF37 534 aa16.53■□□□□ 0.24
MRPL55-222ENST00000457264 CCHCR1Q8TD31 782 aa16.53■□□□□ 0.24
MRPL55-222ENST00000457264 TBC1D10AQ9BXI6 508 aa16.53■□□□□ 0.24
MRPL55-222ENST00000457264 TDRD1Q9BXT4 1180 aaKnown RBP16.53■□□□□ 0.24
MRPL55-222ENST00000457264 ULBP3Q9BZM4 244 aa16.53■□□□□ 0.24
MRPL55-222ENST00000457264 ISCUQ9H1K1 167 aa16.53■□□□□ 0.24
MRPL55-222ENST00000457264 PCDH9Q9HC56 1237 aa16.53■□□□□ 0.24
MRPL55-222ENST00000457264 RTN4Q9NQC3 1192 aaKnown RBP16.53■□□□□ 0.24
MRPL55-222ENST00000457264 RCOR3Q9P2K3 495 aaPredicted RBP16.53■□□□□ 0.24
MRPL55-222ENST00000457264 IP6K2Q9UHH9 426 aa16.53■□□□□ 0.24
MRPL55-222ENST00000457264 AMACRQ9UHK6 382 aa16.53■□□□□ 0.24
MRPL55-222ENST00000457264 RGSL1A5PLK6 1076 aa16.52■□□□□ 0.24
MRPL55-222ENST00000457264 A6NCN8 305 aa16.52■□□□□ 0.24
MRPL55-222ENST00000457264 GRID2O43424 1007 aa16.52■□□□□ 0.24
MRPL55-222ENST00000457264 DLGAP3O95886 979 aa16.52■□□□□ 0.24
MRPL55-222ENST00000457264 PRLP01236 227 aa16.52■□□□□ 0.24
MRPL55-222ENST00000457264 SKILP12757 684 aa16.52■□□□□ 0.24
MRPL55-222ENST00000457264 IL4RP24394 825 aa16.52■□□□□ 0.24
MRPL55-222ENST00000457264 SSR1P43307 286 aaKnown RBP16.52■□□□□ 0.24
MRPL55-222ENST00000457264 SPINT3P49223 89 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms