RNA–Protein interactions for RNA: ENST00000456754.6

TIMP1-205, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

TSL 1 (best) BASIC

Gene TIMP1, Length 1,095 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-205ENST00000456754 PRAMEF1O95521 474 aa13.96□□□□□ -0.17
TIMP1-205ENST00000456754 CELA2BP08218 269 aaPredicted RBP13.96□□□□□ -0.17
TIMP1-205ENST00000456754 TSHRP16473 764 aa13.96□□□□□ -0.17
TIMP1-205ENST00000456754 ARNTP27540 789 aa13.96□□□□□ -0.17
TIMP1-205ENST00000456754 MC4RP32245 332 aa13.96□□□□□ -0.17
TIMP1-205ENST00000456754 NPY2RP49146 381 aa13.96□□□□□ -0.17
TIMP1-205ENST00000456754 THOP1P52888 689 aa13.96□□□□□ -0.17
TIMP1-205ENST00000456754 GUCY2DQ02846 1103 aa13.96□□□□□ -0.17
TIMP1-205ENST00000456754 SEMA3AQ14563 771 aa13.96□□□□□ -0.17
TIMP1-205ENST00000456754 FASTKD3Q14CZ7 662 aaKnown RBP13.96□□□□□ -0.17
TIMP1-205ENST00000456754 MORF4L2Q15014 288 aa13.96□□□□□ -0.17
TIMP1-205ENST00000456754 ALG11Q2TAA5 492 aa13.96□□□□□ -0.17
TIMP1-205ENST00000456754 BBS9Q3SYG4 887 aa13.96□□□□□ -0.17
TIMP1-205ENST00000456754 PCID2Q5JVF3 399 aa13.96□□□□□ -0.17
TIMP1-205ENST00000456754 MARK2Q7KZI7 788 aaKnown RBP13.96□□□□□ -0.17
TIMP1-205ENST00000456754 RD3Q7Z3Z2 195 aa13.96□□□□□ -0.17
TIMP1-205ENST00000456754 ALYREFQ86V81 257 aaKnown RBP13.96□□□□□ -0.17
TIMP1-205ENST00000456754 IQCHQ86VS3 1027 aa13.96□□□□□ -0.17
TIMP1-205ENST00000456754 UNC5BQ8IZJ1 945 aa13.96□□□□□ -0.17
TIMP1-205ENST00000456754 TRAM1L1Q8N609 369 aa13.96□□□□□ -0.17
TIMP1-205ENST00000456754 CEP112Q8N8E3 955 aa13.96□□□□□ -0.17
TIMP1-205ENST00000456754 PPHLN1Q8NEY8 458 aaKnown RBP13.96□□□□□ -0.17
TIMP1-205ENST00000456754 HDAC10Q969S8 669 aa13.96□□□□□ -0.17
TIMP1-205ENST00000456754 CDKN2AIPNLQ96HQ2 116 aa13.96□□□□□ -0.17
TIMP1-205ENST00000456754 COX14Q96I36 57 aa13.96□□□□□ -0.17
TIMP1-205ENST00000456754 PLEKHG4BQ96PX9 1271 aa13.96□□□□□ -0.17
TIMP1-205ENST00000456754 EDEM2Q9BV94 578 aa13.96□□□□□ -0.17
TIMP1-205ENST00000456754 NUSAP1Q9BXS6 441 aaKnown RBP13.96□□□□□ -0.17
TIMP1-205ENST00000456754 GAREM1Q9H706 876 aa13.96□□□□□ -0.17
TIMP1-205ENST00000456754 PLAC1Q9HBJ0 212 aa13.96□□□□□ -0.17
TIMP1-205ENST00000456754 TREX1Q9NSU2 369 aa13.96□□□□□ -0.17
TIMP1-205ENST00000456754 BFARQ9NZS9 450 aa13.96□□□□□ -0.17
TIMP1-205ENST00000456754 NFKBIL1Q9UBC1 381 aaPredicted RBP13.96□□□□□ -0.17
TIMP1-205ENST00000456754 PRKAB1Q9Y478 270 aa13.96□□□□□ -0.17
TIMP1-205ENST00000456754 PLEKHM1Q9Y4G2 1056 aa13.96□□□□□ -0.17
TIMP1-205ENST00000456754 ZNF292O60281 2723 aa13.95□□□□□ -0.18
TIMP1-205ENST00000456754 RGSL1A5PLK6 1076 aa13.95□□□□□ -0.18
TIMP1-205ENST00000456754 GOLGA8KD6RF30 607 aa13.95□□□□□ -0.18
TIMP1-205ENST00000456754 GOLGA8TH3BQL2 631 aa13.95□□□□□ -0.18
TIMP1-205ENST00000456754 SRP72O76094 671 aaKnown RBP13.95□□□□□ -0.18
TIMP1-205ENST00000456754 GOT2P00505 430 aaKnown RBP13.95□□□□□ -0.18
TIMP1-205ENST00000456754 CEACAM5P06731 702 aa13.95□□□□□ -0.18
TIMP1-205ENST00000456754 RHOXF2BP0C7M4 288 aa13.95□□□□□ -0.18
TIMP1-205ENST00000456754 MYCLP1P12525 358 aaPredicted RBP13.95□□□□□ -0.18
TIMP1-205ENST00000456754 MLNP12872 115 aa13.95□□□□□ -0.18
TIMP1-205ENST00000456754 PSMA3P25788 255 aa13.95□□□□□ -0.18
TIMP1-205ENST00000456754 DPP6P42658 865 aa13.95□□□□□ -0.18
TIMP1-205ENST00000456754 PLTPP55058 493 aa13.95□□□□□ -0.18
TIMP1-205ENST00000456754 KIAA1024LP59773 190 aa13.95□□□□□ -0.18
TIMP1-205ENST00000456754 BNIP3Q12983 259 aa13.95□□□□□ -0.18
TIMP1-205ENST00000456754 AASDHQ4L235 1098 aaPredicted RBP13.95□□□□□ -0.18
TIMP1-205ENST00000456754 PSAPL1Q6NUJ1 521 aa13.95□□□□□ -0.18
TIMP1-205ENST00000456754 CASC4Q6P4E1 433 aa13.95□□□□□ -0.18
TIMP1-205ENST00000456754 MACC1Q6ZN28 852 aa13.95□□□□□ -0.18
TIMP1-205ENST00000456754 PCGF5Q86SE9 256 aa13.95□□□□□ -0.18
TIMP1-205ENST00000456754 LDB1Q86U70 411 aaPredicted RBP13.95□□□□□ -0.18
TIMP1-205ENST00000456754 HOOK3Q86VS8 718 aa13.95□□□□□ -0.18
TIMP1-205ENST00000456754 NLRP8Q86W28 1048 aa13.95□□□□□ -0.18
TIMP1-205ENST00000456754 GATAD2AQ86YP4 633 aa13.95□□□□□ -0.18
TIMP1-205ENST00000456754 ANKMY2Q8IV38 441 aa13.95□□□□□ -0.18
TIMP1-205ENST00000456754 PIANPQ8IYJ0 282 aa13.95□□□□□ -0.18
TIMP1-205ENST00000456754 MINDY1Q8N5J2 469 aa13.95□□□□□ -0.18
TIMP1-205ENST00000456754 STYXQ8WUJ0 223 aa13.95□□□□□ -0.18
TIMP1-205ENST00000456754 GLYATL1Q969I3 302 aa13.95□□□□□ -0.18
TIMP1-205ENST00000456754 HIC2Q96JB3 615 aa13.95□□□□□ -0.18
TIMP1-205ENST00000456754 RHOXF2Q9BQY4 288 aa13.95□□□□□ -0.18
TIMP1-205ENST00000456754 KIFC1Q9BW19 673 aa13.95□□□□□ -0.18
TIMP1-205ENST00000456754 FRMD8Q9BZ67 464 aaPredicted RBP13.95□□□□□ -0.18
TIMP1-205ENST00000456754 IL22Q9GZX6 179 aa13.95□□□□□ -0.18
TIMP1-205ENST00000456754 XAB2Q9HCS7 855 aaKnown RBP13.95□□□□□ -0.18
TIMP1-205ENST00000456754 GDF3Q9NR23 364 aa13.95□□□□□ -0.18
TIMP1-205ENST00000456754 UCKL1Q9NWZ5 548 aa13.95□□□□□ -0.18
TIMP1-205ENST00000456754 DNAJC28Q9NX36 388 aa13.95□□□□□ -0.18
TIMP1-205ENST00000456754 WHRNQ9P202 907 aa13.95□□□□□ -0.18
TIMP1-205ENST00000456754 MARCH4Q9P2E8 410 aaPredicted RBP13.95□□□□□ -0.18
TIMP1-205ENST00000456754 MOSPD1Q9UJG1 213 aa13.95□□□□□ -0.18
TIMP1-205ENST00000456754 SOX13Q9UN79 622 aa13.95□□□□□ -0.18
TIMP1-205ENST00000456754 UTP11Q9Y3A2 253 aaKnown RBP13.95□□□□□ -0.18
TIMP1-205ENST00000456754 MAD1L1Q9Y6D9 718 aa13.95□□□□□ -0.18
TIMP1-205ENST00000456754 SDR42E2A6NKP2 422 aa13.94□□□□□ -0.18
TIMP1-205ENST00000456754 CACNB4O00305 520 aaPredicted RBP13.94□□□□□ -0.18
TIMP1-205ENST00000456754 TEAD1P28347 426 aa13.94□□□□□ -0.18
TIMP1-205ENST00000456754 YPEL5P62699 121 aa13.94□□□□□ -0.18
TIMP1-205ENST00000456754 SARNPP82979 210 aaKnown RBP13.94□□□□□ -0.18
TIMP1-205ENST00000456754 C1orf61Q13536 156 aa13.94□□□□□ -0.18
TIMP1-205ENST00000456754 ZNF423Q2M1K9 1284 aa13.94□□□□□ -0.18
TIMP1-205ENST00000456754 ZRANB3Q5FWF4 1079 aa13.94□□□□□ -0.18
TIMP1-205ENST00000456754 UBAP2Q5T6F2 1119 aaKnown RBP13.94□□□□□ -0.18
TIMP1-205ENST00000456754 GPRC6AQ5T6X5 926 aa13.94□□□□□ -0.18
TIMP1-205ENST00000456754 RABEPKQ7Z6M1 372 aa13.94□□□□□ -0.18
TIMP1-205ENST00000456754 HID1Q8IV36 788 aa13.94□□□□□ -0.18
TIMP1-205ENST00000456754 RAVER1Q8IY67 606 aaKnown RBP13.94□□□□□ -0.18
TIMP1-205ENST00000456754 CCL4L1Q8NHW4 92 aa13.94□□□□□ -0.18
TIMP1-205ENST00000456754 FBXO25Q8TCJ0 367 aa13.94□□□□□ -0.18
TIMP1-205ENST00000456754 ZNF398Q8TD17 642 aa13.94□□□□□ -0.18
TIMP1-205ENST00000456754 BTN2A2Q8WVV5 523 aa13.94□□□□□ -0.18
TIMP1-205ENST00000456754 ART4Q93070 314 aa13.94□□□□□ -0.18
TIMP1-205ENST00000456754 ZNF669Q96BR6 464 aaPredicted RBP13.94□□□□□ -0.18
TIMP1-205ENST00000456754 FAM122AQ96E09 287 aa13.94□□□□□ -0.18
TIMP1-205ENST00000456754 WDR92Q96MX6 357 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms