RNA–Protein interactions for RNA: ENST00000456040.1

R3HDM1-212, Transcript of R3H domain containing 1, humanhuman

TSL 5

Gene R3HDM1, Length 851 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-212ENST00000456040 PTPRCP08575 1304 aa3.51□□□□□ -1.85
R3HDM1-212ENST00000456040 FAM237AA0A1B0GTK4 181 aa3.51□□□□□ -1.85
R3HDM1-212ENST00000456040 EIF3CLB5ME19 914 aaKnown RBP3.51□□□□□ -1.85
R3HDM1-212ENST00000456040 PRSS1P07477 247 aa3.51□□□□□ -1.85
R3HDM1-212ENST00000456040 HSP90AA1P07900 732 aaKnown RBP3.51□□□□□ -1.85
R3HDM1-212ENST00000456040 ZNF182P17025 639 aaPredicted RBP3.51□□□□□ -1.85
R3HDM1-212ENST00000456040 PIP4K2AP48426 406 aaPredicted RBP3.51□□□□□ -1.85
R3HDM1-212ENST00000456040 HOXA1P49639 335 aaPredicted RBP3.51□□□□□ -1.85
R3HDM1-212ENST00000456040 TAS2R38P59533 333 aa3.51□□□□□ -1.85
R3HDM1-212ENST00000456040 ISL1P61371 349 aa3.51□□□□□ -1.85
R3HDM1-212ENST00000456040 DCTN2Q13561 401 aaKnown RBP3.51□□□□□ -1.85
R3HDM1-212ENST00000456040 SIM2Q14190 667 aaPredicted RBP3.51□□□□□ -1.85
R3HDM1-212ENST00000456040 CCDC96Q2M329 555 aa3.51□□□□□ -1.85
R3HDM1-212ENST00000456040 TMEM35AQ53FP2 167 aa3.51□□□□□ -1.85
R3HDM1-212ENST00000456040 CEP85LQ5SZL2 805 aa3.51□□□□□ -1.85
R3HDM1-212ENST00000456040 DCST1Q5T197 706 aa3.51□□□□□ -1.85
R3HDM1-212ENST00000456040 ZNF280DQ6N043 979 aa3.51□□□□□ -1.85
R3HDM1-212ENST00000456040 CDC73Q6P1J9 531 aa3.51□□□□□ -1.85
R3HDM1-212ENST00000456040 GPR180Q86V85 440 aa3.51□□□□□ -1.85
R3HDM1-212ENST00000456040 CCDC13Q8IYE1 715 aa3.51□□□□□ -1.85
R3HDM1-212ENST00000456040 BEST3Q8N1M1 668 aa3.51□□□□□ -1.85
R3HDM1-212ENST00000456040 TSPYL6Q8N831 410 aa3.51□□□□□ -1.85
R3HDM1-212ENST00000456040 SLC24A4Q8NFF2 622 aa3.51□□□□□ -1.85
R3HDM1-212ENST00000456040 GRAMD2BQ96HH9 432 aa3.51□□□□□ -1.85
R3HDM1-212ENST00000456040 TMEM68Q96MH6 324 aa3.51□□□□□ -1.85
R3HDM1-212ENST00000456040 ACOX2Q99424 681 aa3.51□□□□□ -1.85
R3HDM1-212ENST00000456040 EIF2AK1Q9BQI3 630 aaKnown RBP3.51□□□□□ -1.85
R3HDM1-212ENST00000456040 NEURL2Q9BR09 285 aa3.51□□□□□ -1.85
R3HDM1-212ENST00000456040 PCGF1Q9BSM1 259 aa3.51□□□□□ -1.85
R3HDM1-212ENST00000456040 C1QTNF5Q9BXJ0 243 aa3.51□□□□□ -1.85
R3HDM1-212ENST00000456040 ACSS1Q9NUB1 689 aaPredicted RBP3.51□□□□□ -1.85
R3HDM1-212ENST00000456040 FAM118AQ9NWS6 357 aa3.51□□□□□ -1.85
R3HDM1-212ENST00000456040 TAS2R10Q9NYW0 307 aa3.51□□□□□ -1.85
R3HDM1-212ENST00000456040 C9orf78Q9NZ63 289 aaPredicted RBP3.51□□□□□ -1.85
R3HDM1-212ENST00000456040 ACSL5Q9ULC5 683 aa3.51□□□□□ -1.85
R3HDM1-212ENST00000456040 GTF2A1LQ9UNN4 478 aa3.51□□□□□ -1.85
R3HDM1-212ENST00000456040 DLGAP4Q9Y2H0 992 aa3.51□□□□□ -1.85
R3HDM1-212ENST00000456040 OBSCNQ5VST9 7968 aa3.5□□□□□ -1.85
R3HDM1-212ENST00000456040 KDM3AQ9Y4C1 1321 aa3.5□□□□□ -1.85
R3HDM1-212ENST00000456040 KAT6BQ8WYB5 2073 aa3.5□□□□□ -1.85
R3HDM1-212ENST00000456040 ZNHIT1O43257 154 aa3.5□□□□□ -1.85
R3HDM1-212ENST00000456040 POLR2CP19387 275 aaPredicted RBP3.5□□□□□ -1.85
R3HDM1-212ENST00000456040 EPHA8P29322 1005 aaPredicted RBP3.5□□□□□ -1.85
R3HDM1-212ENST00000456040 HOXC9P31274 260 aa3.5□□□□□ -1.85
R3HDM1-212ENST00000456040 AMPHP49418 695 aa3.5□□□□□ -1.85
R3HDM1-212ENST00000456040 MMP14P50281 582 aa3.5□□□□□ -1.85
R3HDM1-212ENST00000456040 TUBP50607 506 aa3.5□□□□□ -1.85
R3HDM1-212ENST00000456040 CRIP2P52943 208 aaPredicted RBP3.5□□□□□ -1.85
R3HDM1-212ENST00000456040 RARSP54136 660 aaKnown RBP3.5□□□□□ -1.85
R3HDM1-212ENST00000456040 GAGE5Q13069 117 aa3.5□□□□□ -1.85
R3HDM1-212ENST00000456040 GAGE6Q13070 117 aa3.5□□□□□ -1.85
R3HDM1-212ENST00000456040 DECR1Q16698 335 aa3.5□□□□□ -1.85
R3HDM1-212ENST00000456040 MYLK3Q32MK0 819 aa3.5□□□□□ -1.85
R3HDM1-212ENST00000456040 CCNYL2Q5T2Q4 361 aa3.5□□□□□ -1.85
R3HDM1-212ENST00000456040 STXBP5Q5T5C0 1151 aa3.5□□□□□ -1.85
R3HDM1-212ENST00000456040 ACAD10Q6JQN1 1059 aa3.5□□□□□ -1.85
R3HDM1-212ENST00000456040 TSSK4Q6SA08 328 aa3.5□□□□□ -1.85
R3HDM1-212ENST00000456040 ZNF852Q6ZMS4 543 aa3.5□□□□□ -1.85
R3HDM1-212ENST00000456040 DPPA4Q7L190 304 aa3.5□□□□□ -1.85
R3HDM1-212ENST00000456040 THAP6Q8TBB0 222 aa3.5□□□□□ -1.85
R3HDM1-212ENST00000456040 GRAPLQ8TC17 118 aaPredicted RBP3.5□□□□□ -1.85
R3HDM1-212ENST00000456040 PSPC1Q8WXF1 523 aaKnown RBP3.5□□□□□ -1.85
R3HDM1-212ENST00000456040 APBB2Q92870 758 aa3.5□□□□□ -1.85
R3HDM1-212ENST00000456040 TAAR8Q969N4 342 aa3.5□□□□□ -1.85
R3HDM1-212ENST00000456040 RHBDF1Q96CC6 855 aa3.5□□□□□ -1.85
R3HDM1-212ENST00000456040 PCYT2Q99447 389 aa3.5□□□□□ -1.85
R3HDM1-212ENST00000456040 POLR3CQ9BUI4 534 aaPredicted RBP3.5□□□□□ -1.85
R3HDM1-212ENST00000456040 SEBOXQ9HB31 216 aaPredicted RBP3.5□□□□□ -1.85
R3HDM1-212ENST00000456040 LTB4R2Q9NPC1 389 aa3.5□□□□□ -1.85
R3HDM1-212ENST00000456040 PCDHB16Q9NRJ7 776 aa3.5□□□□□ -1.85
R3HDM1-212ENST00000456040 FBXL2Q9UKC9 423 aa3.5□□□□□ -1.85
R3HDM1-212ENST00000456040 FAF1Q9UNN5 650 aaPredicted RBP3.5□□□□□ -1.85
R3HDM1-212ENST00000456040 GAB2Q9UQC2 676 aa3.5□□□□□ -1.85
R3HDM1-212ENST00000456040 NAALADL1Q9UQQ1 740 aa3.5□□□□□ -1.85
R3HDM1-212ENST00000456040 CRYL1Q9Y2S2 319 aa3.5□□□□□ -1.85
R3HDM1-212ENST00000456040 CAPN7Q9Y6W3 813 aa3.5□□□□□ -1.85
R3HDM1-212ENST00000456040 A0A1W2PRG0 241 aa3.49□□□□□ -1.85
R3HDM1-212ENST00000456040 HS3ST1O14792 307 aa3.49□□□□□ -1.85
R3HDM1-212ENST00000456040 SEC14L2O76054 403 aa3.49□□□□□ -1.85
R3HDM1-212ENST00000456040 FAM106CPP0CH98 169 aa3.49□□□□□ -1.85
R3HDM1-212ENST00000456040 UBL4AP11441 157 aa3.49□□□□□ -1.85
R3HDM1-212ENST00000456040 TIMP3P35625 211 aa3.49□□□□□ -1.85
R3HDM1-212ENST00000456040 HARS2P49590 506 aaKnown RBP3.49□□□□□ -1.85
R3HDM1-212ENST00000456040 TAF6P49848 677 aa3.49□□□□□ -1.85
R3HDM1-212ENST00000456040 GEMIN4P57678 1058 aaKnown RBP3.49□□□□□ -1.85
R3HDM1-212ENST00000456040 MAD2L1Q13257 205 aaPredicted RBP3.49□□□□□ -1.85
R3HDM1-212ENST00000456040 CCNG2Q16589 344 aa3.49□□□□□ -1.85
R3HDM1-212ENST00000456040 SIRPB2Q5JXA9 342 aa3.49□□□□□ -1.85
R3HDM1-212ENST00000456040 ZNF704Q6ZNC4 412 aaPredicted RBP3.49□□□□□ -1.85
R3HDM1-212ENST00000456040 HEATR4Q86WZ0 1026 aa3.49□□□□□ -1.85
R3HDM1-212ENST00000456040 KLHDC8BQ8IXV7 354 aa3.49□□□□□ -1.85
R3HDM1-212ENST00000456040 C1orf131Q8NDD1 294 aaKnown RBP3.49□□□□□ -1.85
R3HDM1-212ENST00000456040 OR5R1Q8NH85 324 aa3.49□□□□□ -1.85
R3HDM1-212ENST00000456040 HMGCLL1Q8TB92 370 aa3.49□□□□□ -1.85
R3HDM1-212ENST00000456040 DNAAF4Q8WXU2 420 aa3.49□□□□□ -1.85
R3HDM1-212ENST00000456040 SMARCE1Q969G3 411 aa3.49□□□□□ -1.85
R3HDM1-212ENST00000456040 IGSF8Q969P0 613 aa3.49□□□□□ -1.85
R3HDM1-212ENST00000456040 ZUFSPQ96AP4 578 aa3.49□□□□□ -1.85
R3HDM1-212ENST00000456040 RRP36Q96EU6 259 aaKnown RBP3.49□□□□□ -1.85
R3HDM1-212ENST00000456040 RRNAD1Q96FB5 475 aaKnown RBP3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms