RNA–Protein interactions for RNA: ENST00000454542.5

HDAC4-205, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-205ENST00000454542 CARS2Q9HA77 564 aaKnown RBP14.06□□□□□ -0.16
HDAC4-205ENST00000454542 ETNK1Q9HBU6 452 aa14.06□□□□□ -0.16
HDAC4-205ENST00000454542 CYP4F12Q9HCS2 524 aa14.06□□□□□ -0.16
HDAC4-205ENST00000454542 IL26Q9NPH9 171 aa14.06□□□□□ -0.16
HDAC4-205ENST00000454542 EIF2B3Q9NR50 452 aaKnown RBP14.06□□□□□ -0.16
HDAC4-205ENST00000454542 PCYT1BQ9Y5K3 369 aaPredicted RBP14.06□□□□□ -0.16
HDAC4-205ENST00000454542 ST14Q9Y5Y6 855 aa14.06□□□□□ -0.16
HDAC4-205ENST00000454542 ZFC3H1O60293 1989 aaKnown RBP14.05□□□□□ -0.16
HDAC4-205ENST00000454542 GPR89AB7ZAQ6 455 aa14.05□□□□□ -0.16
HDAC4-205ENST00000454542 INPP4BO15327 924 aa14.05□□□□□ -0.16
HDAC4-205ENST00000454542 LDB2O43679 373 aa14.05□□□□□ -0.16
HDAC4-205ENST00000454542 ANXA6P08133 673 aa14.05□□□□□ -0.16
HDAC4-205ENST00000454542 GPR89BP0CG08 455 aa14.05□□□□□ -0.16
HDAC4-205ENST00000454542 CTSEP14091 401 aa14.05□□□□□ -0.16
HDAC4-205ENST00000454542 ETS1P14921 441 aa14.05□□□□□ -0.16
HDAC4-205ENST00000454542 RPL22P35268 128 aaKnown RBP14.05□□□□□ -0.16
HDAC4-205ENST00000454542 POLD2P49005 469 aa14.05□□□□□ -0.16
HDAC4-205ENST00000454542 PYCR3Q53H96 274 aa14.05□□□□□ -0.16
HDAC4-205ENST00000454542 HS1BP3Q53T59 392 aa14.05□□□□□ -0.16
HDAC4-205ENST00000454542 PAPD7Q5XG87 772 aaKnown RBP14.05□□□□□ -0.16
HDAC4-205ENST00000454542 TTC27Q6P3X3 843 aa14.05□□□□□ -0.16
HDAC4-205ENST00000454542 C4orf22Q6V702 233 aa14.05□□□□□ -0.16
HDAC4-205ENST00000454542 PRUNE1Q86TP1 453 aa14.05□□□□□ -0.16
HDAC4-205ENST00000454542 GKN2Q86XP6 184 aa14.05□□□□□ -0.16
HDAC4-205ENST00000454542 NRROSQ86YC3 692 aa14.05□□□□□ -0.16
HDAC4-205ENST00000454542 PHYKPLQ8IUZ5 450 aa14.05□□□□□ -0.16
HDAC4-205ENST00000454542 ARL10Q8N8L6 244 aa14.05□□□□□ -0.16
HDAC4-205ENST00000454542 CCDC89Q8N998 374 aa14.05□□□□□ -0.16
HDAC4-205ENST00000454542 CCL4L1Q8NHW4 92 aa14.05□□□□□ -0.16
HDAC4-205ENST00000454542 MS4A14Q96JA4 679 aa14.05□□□□□ -0.16
HDAC4-205ENST00000454542 OR2M4Q96R27 311 aa14.05□□□□□ -0.16
HDAC4-205ENST00000454542 NAP1L3Q99457 506 aaPredicted RBP14.05□□□□□ -0.16
HDAC4-205ENST00000454542 RMI1Q9H9A7 625 aa14.05□□□□□ -0.16
HDAC4-205ENST00000454542 BPIFA1Q9NP55 256 aa14.05□□□□□ -0.16
HDAC4-205ENST00000454542 SMARCAL1Q9NZC9 954 aa14.05□□□□□ -0.16
HDAC4-205ENST00000454542 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.05□□□□□ -0.16
HDAC4-205ENST00000454542 NCKIPSDQ9NZQ3 722 aa14.05□□□□□ -0.16
HDAC4-205ENST00000454542 ARL5AQ9Y689 179 aa14.05□□□□□ -0.16
HDAC4-205ENST00000454542 EME2A4GXA9 379 aaPredicted RBP14.04□□□□□ -0.16
HDAC4-205ENST00000454542 AGAP14A8MT82 685 aa14.04□□□□□ -0.16
HDAC4-205ENST00000454542 TOP3BO95985 862 aaKnown RBP14.04□□□□□ -0.16
HDAC4-205ENST00000454542 GP1BAP07359 652 aa14.04□□□□□ -0.16
HDAC4-205ENST00000454542 CDK4P11802 303 aa14.04□□□□□ -0.16
HDAC4-205ENST00000454542 TCP1P17987 556 aaKnown RBP14.04□□□□□ -0.16
HDAC4-205ENST00000454542 LPOP22079 712 aaPredicted RBP14.04□□□□□ -0.16
HDAC4-205ENST00000454542 ADCY8P40145 1251 aa14.04□□□□□ -0.16
HDAC4-205ENST00000454542 GNPDA1P46926 289 aa14.04□□□□□ -0.16
HDAC4-205ENST00000454542 KCNJ1P48048 391 aa14.04□□□□□ -0.16
HDAC4-205ENST00000454542 XIAPP98170 497 aa14.04□□□□□ -0.16
HDAC4-205ENST00000454542 PDE1BQ01064 536 aa14.04□□□□□ -0.16
HDAC4-205ENST00000454542 FOXC1Q12948 553 aa14.04□□□□□ -0.16
HDAC4-205ENST00000454542 LRP8Q14114 963 aa14.04□□□□□ -0.16
HDAC4-205ENST00000454542 SMAD1Q15797 465 aaKnown RBP14.04□□□□□ -0.16
HDAC4-205ENST00000454542 ATP13A5Q4VNC0 1218 aa14.04□□□□□ -0.16
HDAC4-205ENST00000454542 KHDC1Q4VXA5 237 aaKnown RBP14.04□□□□□ -0.16
HDAC4-205ENST00000454542 DOK6Q6PKX4 331 aa14.04□□□□□ -0.16
HDAC4-205ENST00000454542 RD3Q7Z3Z2 195 aa14.04□□□□□ -0.16
HDAC4-205ENST00000454542 LINC00523Q86TU6 105 aa14.04□□□□□ -0.16
HDAC4-205ENST00000454542 C17orf82Q86X59 251 aaPredicted RBP14.04□□□□□ -0.16
HDAC4-205ENST00000454542 PNPLA1Q8N8W4 532 aa14.04□□□□□ -0.16
HDAC4-205ENST00000454542 KYQ8NBH2 561 aa14.04□□□□□ -0.16
HDAC4-205ENST00000454542 GPR156Q8NFN8 814 aa14.04□□□□□ -0.16
HDAC4-205ENST00000454542 TMEM98Q9Y2Y6 226 aa14.04□□□□□ -0.16
HDAC4-205ENST00000454542 NEU2Q9Y3R4 380 aa14.04□□□□□ -0.16
HDAC4-205ENST00000454542 PKP3Q9Y446 797 aa14.04□□□□□ -0.16
HDAC4-205ENST00000454542 NEUROG3Q9Y4Z2 214 aa14.04□□□□□ -0.16
HDAC4-205ENST00000454542 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.03□□□□□ -0.16
HDAC4-205ENST00000454542 GLYATL1P3A0A0U1RQE8 302 aa14.03□□□□□ -0.16
HDAC4-205ENST00000454542 PRR19A6NJB7 356 aa14.03□□□□□ -0.16
HDAC4-205ENST00000454542 C2orf81A6NN90 581 aa14.03□□□□□ -0.16
HDAC4-205ENST00000454542 H7C0S8 307 aa14.03□□□□□ -0.16
HDAC4-205ENST00000454542 CHUKO15111 745 aa14.03□□□□□ -0.16
HDAC4-205ENST00000454542 STX7O15400 261 aaKnown RBP14.03□□□□□ -0.16
HDAC4-205ENST00000454542 GPR39O43194 453 aa14.03□□□□□ -0.16
HDAC4-205ENST00000454542 BUD23O43709 281 aaKnown RBP14.03□□□□□ -0.16
HDAC4-205ENST00000454542 HYAL3O43820 417 aaPredicted RBP14.03□□□□□ -0.16
HDAC4-205ENST00000454542 NUAK1O60285 661 aa14.03□□□□□ -0.16
HDAC4-205ENST00000454542 NOBOXO60393 691 aa14.03□□□□□ -0.16
HDAC4-205ENST00000454542 PHF2O75151 1096 aa14.03□□□□□ -0.16
HDAC4-205ENST00000454542 CRTAMO95727 393 aa14.03□□□□□ -0.16
HDAC4-205ENST00000454542 ZSCAN5DPP0CG00 497 aa14.03□□□□□ -0.16
HDAC4-205ENST00000454542 CA5AP35218 305 aa14.03□□□□□ -0.16
HDAC4-205ENST00000454542 ACTN2P35609 894 aa14.03□□□□□ -0.16
HDAC4-205ENST00000454542 MAGEA6P43360 314 aa14.03□□□□□ -0.16
HDAC4-205ENST00000454542 DUSP3P51452 185 aaPredicted RBP14.03□□□□□ -0.16
HDAC4-205ENST00000454542 DAB2P98082 770 aa14.03□□□□□ -0.16
HDAC4-205ENST00000454542 CDH17Q12864 832 aa14.03□□□□□ -0.16
HDAC4-205ENST00000454542 ITGA9Q13797 1035 aa14.03□□□□□ -0.16
HDAC4-205ENST00000454542 PTPRCAPQ14761 206 aa14.03□□□□□ -0.16
HDAC4-205ENST00000454542 NR0B2Q15466 257 aa14.03□□□□□ -0.16
HDAC4-205ENST00000454542 OGFOD3Q6PK18 319 aa14.03□□□□□ -0.16
HDAC4-205ENST00000454542 TMPRSS7Q7RTY8 843 aa14.03□□□□□ -0.16
HDAC4-205ENST00000454542 ADGRG6Q86SQ4 1221 aa14.03□□□□□ -0.16
HDAC4-205ENST00000454542 GALNT13Q8IUC8 556 aa14.03□□□□□ -0.16
HDAC4-205ENST00000454542 DDHD1Q8NEL9 900 aa14.03□□□□□ -0.16
HDAC4-205ENST00000454542 OR4K2Q8NGD2 314 aa14.03□□□□□ -0.16
HDAC4-205ENST00000454542 TMEM121BQ9BXQ6 578 aaPredicted RBP14.03□□□□□ -0.16
HDAC4-205ENST00000454542 GSDMCQ9BYG8 508 aa14.03□□□□□ -0.16
HDAC4-205ENST00000454542 TRIM39Q9HCM9 518 aa14.03□□□□□ -0.16
HDAC4-205ENST00000454542 CASS4Q9NQ75 786 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms