RNA–Protein interactions for RNA: ENST00000453963.5

SEC16A-207, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SEC16A, Length 4,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-207ENST00000453963 TMEM63AO94886 807 aa11.99□□□□□ -0.49
SEC16A-207ENST00000453963 ARF4P18085 180 aaPredicted RBP11.99□□□□□ -0.49
SEC16A-207ENST00000453963 CCNFP41002 786 aa11.99□□□□□ -0.49
SEC16A-207ENST00000453963 SIM2Q14190 667 aaPredicted RBP11.99□□□□□ -0.49
SEC16A-207ENST00000453963 FNDC3BQ53EP0 1204 aaKnown RBP11.99□□□□□ -0.49
SEC16A-207ENST00000453963 CYP20A1Q6UW02 462 aa11.99□□□□□ -0.49
SEC16A-207ENST00000453963 FAM35AQ86V20 835 aa11.99□□□□□ -0.49
SEC16A-207ENST00000453963 GATAD2AQ86YP4 633 aa11.99□□□□□ -0.49
SEC16A-207ENST00000453963 NIPA2Q8N8Q9 360 aa11.99□□□□□ -0.49
SEC16A-207ENST00000453963 OR52L1Q8NGH7 329 aa11.99□□□□□ -0.49
SEC16A-207ENST00000453963 PPP1R16AQ96I34 528 aa11.99□□□□□ -0.49
SEC16A-207ENST00000453963 GPATCH1Q9BRR8 931 aaKnown RBP11.99□□□□□ -0.49
SEC16A-207ENST00000453963 AASDHPPTQ9NRN7 309 aa11.99□□□□□ -0.49
SEC16A-207ENST00000453963 RCVRNP35243 200 aa11.99□□□□□ -0.49
SEC16A-207ENST00000453963 ECT2LQ008S8 904 aa11.99□□□□□ -0.49
SEC16A-207ENST00000453963 ZFP28Q8NHY6 868 aa11.99□□□□□ -0.49
SEC16A-207ENST00000453963 FAXDC2Q96IV6 333 aa11.99□□□□□ -0.49
SEC16A-207ENST00000453963 NXF3Q9H4D5 531 aaKnown RBP11.99□□□□□ -0.49
SEC16A-207ENST00000453963 ZNHIT2Q9UHR6 403 aa11.99□□□□□ -0.49
SEC16A-207ENST00000453963 ZNF232Q9UNY5 417 aa11.99□□□□□ -0.49
SEC16A-207ENST00000453963 MRPS7Q9Y2R9 242 aaKnown RBP11.99□□□□□ -0.49
SEC16A-207ENST00000453963 AQP12BA6NM10 295 aa11.99□□□□□ -0.49
SEC16A-207ENST00000453963 TFECO14948 347 aaPredicted RBP11.99□□□□□ -0.49
SEC16A-207ENST00000453963 FKTNO75072 461 aa11.99□□□□□ -0.49
SEC16A-207ENST00000453963 NUDT14O95848 222 aa11.99□□□□□ -0.49
SEC16A-207ENST00000453963 DHFRP00374 187 aa11.99□□□□□ -0.49
SEC16A-207ENST00000453963 CSH1P0DML2 217 aa11.99□□□□□ -0.49
SEC16A-207ENST00000453963 CSH2P0DML3 217 aa11.99□□□□□ -0.49
SEC16A-207ENST00000453963 GDF10P55107 478 aa11.99□□□□□ -0.49
SEC16A-207ENST00000453963 TRIM32Q13049 653 aa11.99□□□□□ -0.49
SEC16A-207ENST00000453963 LCP2Q13094 533 aa11.99□□□□□ -0.49
SEC16A-207ENST00000453963 C5orf22Q49AR2 442 aa11.99□□□□□ -0.49
SEC16A-207ENST00000453963 LDLRAP1Q5SW96 308 aa11.99□□□□□ -0.49
SEC16A-207ENST00000453963 BHLHB9Q6PI77 547 aa11.99□□□□□ -0.49
SEC16A-207ENST00000453963 AQP12AQ8IXF9 295 aa11.99□□□□□ -0.49
SEC16A-207ENST00000453963 RBFAQ8N0V3 343 aa11.99□□□□□ -0.49
SEC16A-207ENST00000453963 NETO2Q8NC67 525 aa11.99□□□□□ -0.49
SEC16A-207ENST00000453963 EEF1AKMT1Q8WVE0 214 aa11.99□□□□□ -0.49
SEC16A-207ENST00000453963 ELMO1Q92556 727 aa11.99□□□□□ -0.49
SEC16A-207ENST00000453963 ARHGEF4Q9NR80 690 aa11.99□□□□□ -0.49
SEC16A-207ENST00000453963 RIPK3Q9Y572 518 aa11.99□□□□□ -0.49
SEC16A-207ENST00000453963 PEX16Q9Y5Y5 336 aa11.99□□□□□ -0.49
SEC16A-207ENST00000453963 LYVE1Q9Y5Y7 322 aa11.99□□□□□ -0.49
SEC16A-207ENST00000453963 MRC1P22897 1456 aa11.99□□□□□ -0.49
SEC16A-207ENST00000453963 C2CD4BA6NLJ0 364 aa11.99□□□□□ -0.49
SEC16A-207ENST00000453963 RPP40O75818 363 aaKnown RBP11.99□□□□□ -0.49
SEC16A-207ENST00000453963 SLC6A2P23975 617 aa11.99□□□□□ -0.49
SEC16A-207ENST00000453963 CTSKP43235 329 aa11.99□□□□□ -0.49
SEC16A-207ENST00000453963 THOP1P52888 689 aa11.99□□□□□ -0.49
SEC16A-207ENST00000453963 DOK6Q6PKX4 331 aa11.99□□□□□ -0.49
SEC16A-207ENST00000453963 FAM180AQ6UWF9 173 aa11.99□□□□□ -0.49
SEC16A-207ENST00000453963 FAM131AQ6UXB0 335 aa11.99□□□□□ -0.49
SEC16A-207ENST00000453963 C16orf62Q7Z3J2 963 aa11.99□□□□□ -0.49
SEC16A-207ENST00000453963 RALGPS2Q86X27 583 aaPredicted RBP11.99□□□□□ -0.49
SEC16A-207ENST00000453963 ZNF567Q8N184 647 aa11.99□□□□□ -0.49
SEC16A-207ENST00000453963 PACRGLQ8N7B6 248 aa11.99□□□□□ -0.49
SEC16A-207ENST00000453963 MINDY2Q8NBR6 621 aa11.99□□□□□ -0.49
SEC16A-207ENST00000453963 PPTC7Q8NI37 304 aa11.99□□□□□ -0.49
SEC16A-207ENST00000453963 DCAKDQ8WVC6 231 aa11.99□□□□□ -0.49
SEC16A-207ENST00000453963 LPPQ93052 612 aa11.99□□□□□ -0.49
SEC16A-207ENST00000453963 AGAP2Q99490 1192 aa11.99□□□□□ -0.49
SEC16A-207ENST00000453963 YTHDF1Q9BYJ9 559 aaKnown RBP11.99□□□□□ -0.49
SEC16A-207ENST00000453963 NDOR1Q9UHB4 597 aa11.99□□□□□ -0.49
SEC16A-207ENST00000453963 DNMT3LQ9UJW3 386 aa11.99□□□□□ -0.49
SEC16A-207ENST00000453963 ZNF222Q9UK12 451 aa11.99□□□□□ -0.49
SEC16A-207ENST00000453963 FTH1P02794 183 aa11.98□□□□□ -0.49
SEC16A-207ENST00000453963 PIRTP0C851 137 aa11.98□□□□□ -0.49
SEC16A-207ENST00000453963 PKMP14618 531 aaKnown RBP11.98□□□□□ -0.49
SEC16A-207ENST00000453963 HDCP19113 662 aa11.98□□□□□ -0.49
SEC16A-207ENST00000453963 HTR7P34969 479 aa11.98□□□□□ -0.49
SEC16A-207ENST00000453963 GJA8P48165 433 aa11.98□□□□□ -0.49
SEC16A-207ENST00000453963 SEPHS1P49903 392 aa11.98□□□□□ -0.49
SEC16A-207ENST00000453963 NADK2Q4G0N4 442 aa11.98□□□□□ -0.49
SEC16A-207ENST00000453963 FAM20CQ8IXL6 584 aa11.98□□□□□ -0.49
SEC16A-207ENST00000453963 FSTL5Q8N475 847 aaPredicted RBP11.98□□□□□ -0.49
SEC16A-207ENST00000453963 FAM105AQ9NUU6 356 aa11.98□□□□□ -0.49
SEC16A-207ENST00000453963 PDP1Q9P0J1 537 aaPredicted RBP11.98□□□□□ -0.49
SEC16A-207ENST00000453963 AJAP1Q9UKB5 411 aaPredicted RBP11.98□□□□□ -0.49
SEC16A-207ENST00000453963 GIT1Q9Y2X7 761 aa11.98□□□□□ -0.49
SEC16A-207ENST00000453963 STON1Q9Y6Q2 735 aa11.98□□□□□ -0.49
SEC16A-207ENST00000453963 HMGB3O15347 200 aaKnown RBP11.98□□□□□ -0.49
SEC16A-207ENST00000453963 SERPINB7O75635 380 aa11.98□□□□□ -0.49
SEC16A-207ENST00000453963 OR6A2O95222 327 aa11.98□□□□□ -0.49
SEC16A-207ENST00000453963 TLX1P31314 330 aaPredicted RBP11.98□□□□□ -0.49
SEC16A-207ENST00000453963 MAPK9P45984 424 aa11.98□□□□□ -0.49
SEC16A-207ENST00000453963 COPZ1P61923 177 aa11.98□□□□□ -0.49
SEC16A-207ENST00000453963 LGALS3BPQ08380 585 aa11.98□□□□□ -0.49
SEC16A-207ENST00000453963 TRMT10BQ6PF06 316 aaKnown RBP11.98□□□□□ -0.49
SEC16A-207ENST00000453963 METTL3Q86U44 580 aaKnown RBP11.98□□□□□ -0.49
SEC16A-207ENST00000453963 ZNF655Q8N720 491 aaPredicted RBP11.98□□□□□ -0.49
SEC16A-207ENST00000453963 ENDOVQ8N8Q3 282 aaKnown RBP11.98□□□□□ -0.49
SEC16A-207ENST00000453963 E7ENX8 843 aa11.98□□□□□ -0.49
SEC16A-207ENST00000453963 CCNCP24863 283 aa11.98□□□□□ -0.49
SEC16A-207ENST00000453963 FAM92BQ6ZTR7 304 aa11.98□□□□□ -0.49
SEC16A-207ENST00000453963 TMEM199Q8N511 208 aa11.98□□□□□ -0.49
SEC16A-207ENST00000453963 SLC39A8Q9C0K1 460 aa11.98□□□□□ -0.49
SEC16A-207ENST00000453963 RWDD3Q9Y3V2 267 aa11.98□□□□□ -0.49
SEC16A-207ENST00000453963 TCAF1Q9Y4C2 921 aa11.98□□□□□ -0.49
SEC16A-207ENST00000453963 FAM240BA0A1B0GVZ2 78 aa11.98□□□□□ -0.49
SEC16A-207ENST00000453963 A8MX80 341 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms