RNA–Protein interactions for RNA: ENST00000452483.1

HMGB3P21-201, Transcript of high mobility group box 3 pseudogene 21, humanhuman

BASIC

Gene HMGB3P21, Length 547 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P21-201ENST00000452483 JKAMPQ9P055 326 aa4.44□□□□□ -1.7
HMGB3P21-201ENST00000452483 HSPB7Q9UBY9 170 aa4.44□□□□□ -1.7
HMGB3P21-201ENST00000452483 DDX25Q9UHL0 483 aaKnown RBP4.44□□□□□ -1.7
HMGB3P21-201ENST00000452483 VPS51Q9UID3 782 aa4.44□□□□□ -1.7
HMGB3P21-201ENST00000452483 HAO1Q9UJM8 370 aa4.44□□□□□ -1.7
HMGB3P21-201ENST00000452483 PLAGL1Q9UM63 463 aa4.44□□□□□ -1.7
HMGB3P21-201ENST00000452483 SLC45A2Q9UMX9 530 aa4.44□□□□□ -1.7
HMGB3P21-201ENST00000452483 C15orf41Q9Y2V0 281 aa4.44□□□□□ -1.7
HMGB3P21-201ENST00000452483 PLEKHG2Q9H7P9 1386 aa4.43□□□□□ -1.7
HMGB3P21-201ENST00000452483 A0A075B6Q4 140 aa4.43□□□□□ -1.7
HMGB3P21-201ENST00000452483 LOC105369274A0A096LPK9 316 aa4.43□□□□□ -1.7
HMGB3P21-201ENST00000452483 LOC102723532A0A0G2JNH3 316 aa4.43□□□□□ -1.7
HMGB3P21-201ENST00000452483 TARSL2A2RTX5 802 aaKnown RBP4.43□□□□□ -1.7
HMGB3P21-201ENST00000452483 YDJCA8MPS7 323 aa4.43□□□□□ -1.7
HMGB3P21-201ENST00000452483 ZNF879B4DU55 563 aa4.43□□□□□ -1.7
HMGB3P21-201ENST00000452483 GRM8O00222 908 aa4.43□□□□□ -1.7
HMGB3P21-201ENST00000452483 PRRG1O14668 218 aa4.43□□□□□ -1.7
HMGB3P21-201ENST00000452483 FFAR3O14843 346 aa4.43□□□□□ -1.7
HMGB3P21-201ENST00000452483 TEX28O15482 410 aa4.43□□□□□ -1.7
HMGB3P21-201ENST00000452483 TTI1O43156 1089 aa4.43□□□□□ -1.7
HMGB3P21-201ENST00000452483 MED24O75448 989 aa4.43□□□□□ -1.7
HMGB3P21-201ENST00000452483 ITGA10O75578 1167 aa4.43□□□□□ -1.7
HMGB3P21-201ENST00000452483 KLHL18O94889 574 aa4.43□□□□□ -1.7
HMGB3P21-201ENST00000452483 VNN2O95498 520 aa4.43□□□□□ -1.7
HMGB3P21-201ENST00000452483 SLC16A8O95907 504 aa4.43□□□□□ -1.7
HMGB3P21-201ENST00000452483 CHEK2O96017 543 aa4.43□□□□□ -1.7
HMGB3P21-201ENST00000452483 GH1P01241 217 aa4.43□□□□□ -1.7
HMGB3P21-201ENST00000452483 GASTP01350 101 aa4.43□□□□□ -1.7
HMGB3P21-201ENST00000452483 C8BP07358 591 aa4.43□□□□□ -1.7
HMGB3P21-201ENST00000452483 CYP2C8P10632 490 aa4.43□□□□□ -1.7
HMGB3P21-201ENST00000452483 PEPDP12955 493 aa4.43□□□□□ -1.7
HMGB3P21-201ENST00000452483 HGFP14210 728 aa4.43□□□□□ -1.7
HMGB3P21-201ENST00000452483 PKMP14618 531 aaKnown RBP4.43□□□□□ -1.7
HMGB3P21-201ENST00000452483 MMP9P14780 707 aa4.43□□□□□ -1.7
HMGB3P21-201ENST00000452483 GCFC2P16383 781 aaKnown RBP4.43□□□□□ -1.7
HMGB3P21-201ENST00000452483 ACAT1P24752 427 aaKnown RBP4.43□□□□□ -1.7
HMGB3P21-201ENST00000452483 S100A5P33763 92 aa4.43□□□□□ -1.7
HMGB3P21-201ENST00000452483 SERPINB6P35237 376 aa4.43□□□□□ -1.7
HMGB3P21-201ENST00000452483 RFC2P35250 354 aa4.43□□□□□ -1.7
HMGB3P21-201ENST00000452483 CASRP41180 1078 aa4.43□□□□□ -1.7
HMGB3P21-201ENST00000452483 MAGEA1P43355 309 aa4.43□□□□□ -1.7
HMGB3P21-201ENST00000452483 ARSEP51690 589 aa4.43□□□□□ -1.7
HMGB3P21-201ENST00000452483 PRKAG1P54619 331 aa4.43□□□□□ -1.7
HMGB3P21-201ENST00000452483 MAP3K7CLP57077 242 aa4.43□□□□□ -1.7
HMGB3P21-201ENST00000452483 ANTXR2P58335 489 aa4.43□□□□□ -1.7
HMGB3P21-201ENST00000452483 ABATP80404 500 aa4.43□□□□□ -1.7
HMGB3P21-201ENST00000452483 SPP2Q13103 211 aa4.43□□□□□ -1.7
HMGB3P21-201ENST00000452483 PDZK1IP1Q13113 114 aa4.43□□□□□ -1.7
HMGB3P21-201ENST00000452483 DNAJC3Q13217 504 aa4.43□□□□□ -1.7
HMGB3P21-201ENST00000452483 OLIG2Q13516 323 aa4.43□□□□□ -1.7
HMGB3P21-201ENST00000452483 LPIN1Q14693 890 aa4.43□□□□□ -1.7
HMGB3P21-201ENST00000452483 IQCB1Q15051 598 aa4.43□□□□□ -1.7
HMGB3P21-201ENST00000452483 RBBP5Q15291 538 aaKnown RBP4.43□□□□□ -1.7
HMGB3P21-201ENST00000452483 ZXDCQ2QGD7 858 aaPredicted RBP4.43□□□□□ -1.7
HMGB3P21-201ENST00000452483 FSCBQ5H9T9 825 aa4.43□□□□□ -1.7
HMGB3P21-201ENST00000452483 TMEM196Q5HYL7 178 aa4.43□□□□□ -1.7
HMGB3P21-201ENST00000452483 SH2D4BQ5SQS7 431 aa4.43□□□□□ -1.7
HMGB3P21-201ENST00000452483 LCE4AQ5TA78 99 aa4.43□□□□□ -1.7
HMGB3P21-201ENST00000452483 ARHGEF16Q5VV41 709 aa4.43□□□□□ -1.7
HMGB3P21-201ENST00000452483 CD276Q5ZPR3 534 aa4.43□□□□□ -1.7
HMGB3P21-201ENST00000452483 CASC4Q6P4E1 433 aa4.43□□□□□ -1.7
HMGB3P21-201ENST00000452483 ERICH5Q6P6B1 374 aa4.43□□□□□ -1.7
HMGB3P21-201ENST00000452483 TTLL10Q6ZVT0 673 aa4.43□□□□□ -1.7
HMGB3P21-201ENST00000452483 TAS1R1Q7RTX1 841 aa4.43□□□□□ -1.7
HMGB3P21-201ENST00000452483 NANOGNBQ7Z5D8 188 aa4.43□□□□□ -1.7
HMGB3P21-201ENST00000452483 ABI3BPQ7Z7G0 1075 aa4.43□□□□□ -1.7
HMGB3P21-201ENST00000452483 ZNF280BQ86YH2 543 aa4.43□□□□□ -1.7
HMGB3P21-201ENST00000452483 RASAL3Q86YV0 1011 aa4.43□□□□□ -1.7
HMGB3P21-201ENST00000452483 SCYL3Q8IZE3 742 aa4.43□□□□□ -1.7
HMGB3P21-201ENST00000452483 OR4N4Q8N0Y3 316 aa4.43□□□□□ -1.7
HMGB3P21-201ENST00000452483 BHLHE23Q8NDY6 225 aa4.43□□□□□ -1.7
HMGB3P21-201ENST00000452483 CFAP61Q8NHU2 1237 aa4.43□□□□□ -1.7
HMGB3P21-201ENST00000452483 MAFAQ8NHW3 353 aaPredicted RBP4.43□□□□□ -1.7
HMGB3P21-201ENST00000452483 DNAJB14Q8TBM8 379 aa4.43□□□□□ -1.7
HMGB3P21-201ENST00000452483 ACMSDQ8TDX5 336 aa4.43□□□□□ -1.7
HMGB3P21-201ENST00000452483 SLC26A7Q8TE54 656 aa4.43□□□□□ -1.7
HMGB3P21-201ENST00000452483 RAB40AQ8WXH6 277 aa4.43□□□□□ -1.7
HMGB3P21-201ENST00000452483 ROBO4Q8WZ75 1007 aa4.43□□□□□ -1.7
HMGB3P21-201ENST00000452483 STARD8Q92502 1023 aa4.43□□□□□ -1.7
HMGB3P21-201ENST00000452483 KCNJ9Q92806 393 aa4.43□□□□□ -1.7
HMGB3P21-201ENST00000452483 SCAMP4Q969E2 229 aa4.43□□□□□ -1.7
HMGB3P21-201ENST00000452483 BSCL2Q96G97 398 aaPredicted RBP4.43□□□□□ -1.7
HMGB3P21-201ENST00000452483 TMEM176AQ96HP8 235 aa4.43□□□□□ -1.7
HMGB3P21-201ENST00000452483 OR2A14Q96R47 310 aa4.43□□□□□ -1.7
HMGB3P21-201ENST00000452483 MPHOSPH9Q99550 1183 aa4.43□□□□□ -1.7
HMGB3P21-201ENST00000452483 JPH2Q9BR39 696 aaPredicted RBP4.43□□□□□ -1.7
HMGB3P21-201ENST00000452483 WDR83Q9BRX9 315 aaKnown RBP4.43□□□□□ -1.7
HMGB3P21-201ENST00000452483 BTBD2Q9BX70 525 aa4.43□□□□□ -1.7
HMGB3P21-201ENST00000452483 LSG1Q9H089 658 aaKnown RBP4.43□□□□□ -1.7
HMGB3P21-201ENST00000452483 NSRP1Q9H0G5 558 aaKnown RBP4.43□□□□□ -1.7
HMGB3P21-201ENST00000452483 DDX47Q9H0S4 455 aaKnown RBP4.43□□□□□ -1.7
HMGB3P21-201ENST00000452483 TRPV6Q9H1D0 765 aa4.43□□□□□ -1.7
HMGB3P21-201ENST00000452483 ZCCHC4Q9H5U6 513 aa4.43□□□□□ -1.7
HMGB3P21-201ENST00000452483 RNPEPL1Q9HAU8 725 aa4.43□□□□□ -1.7
HMGB3P21-201ENST00000452483 PARD6AQ9NPB6 346 aa4.43□□□□□ -1.7
HMGB3P21-201ENST00000452483 PIH1D3Q9NQM4 214 aaKnown RBP4.43□□□□□ -1.7
HMGB3P21-201ENST00000452483 AGPAT3Q9NRZ7 376 aa4.43□□□□□ -1.7
HMGB3P21-201ENST00000452483 TMEM161AQ9NX61 479 aa4.43□□□□□ -1.7
HMGB3P21-201ENST00000452483 IL20Q9NYY1 176 aa4.43□□□□□ -1.7
HMGB3P21-201ENST00000452483 NCKIPSDQ9NZQ3 722 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms