RNA–Protein interactions for RNA: ENST00000451876.5

CPSF4-207, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5 BASIC

Gene CPSF4, Length 1,644 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-207ENST00000451876 UGT1A5P35504 534 aa23.89■■□□□ 1.42
CPSF4-207ENST00000451876 ARL4CP56559 192 aa23.89■■□□□ 1.42
CPSF4-207ENST00000451876 C21orf59P57076 290 aa23.89■■□□□ 1.42
CPSF4-207ENST00000451876 YPEL5P62699 121 aa23.89■■□□□ 1.42
CPSF4-207ENST00000451876 SF3A2Q15428 464 aaKnown RBP23.89■■□□□ 1.42
CPSF4-207ENST00000451876 NLRP9Q7RTR0 991 aa23.89■■□□□ 1.42
CPSF4-207ENST00000451876 IGDCC3Q8IVU1 814 aa23.89■■□□□ 1.42
CPSF4-207ENST00000451876 UGT1A7Q9HAW7 530 aa23.89■■□□□ 1.42
CPSF4-207ENST00000451876 UGT1A10Q9HAW8 530 aa23.89■■□□□ 1.42
CPSF4-207ENST00000451876 UGT1A8Q9HAW9 530 aa23.89■■□□□ 1.42
CPSF4-207ENST00000451876 ARFGAP3Q9NP61 516 aa23.89■■□□□ 1.42
CPSF4-207ENST00000451876 SEMA4GQ9NTN9 838 aa23.89■■□□□ 1.42
CPSF4-207ENST00000451876 ZDHHC18Q9NUE0 388 aa23.89■■□□□ 1.42
CPSF4-207ENST00000451876 APPL1Q9UKG1 709 aa23.89■■□□□ 1.42
CPSF4-207ENST00000451876 PNMA8BQ9ULN7 279 aaPredicted RBP23.89■■□□□ 1.42
CPSF4-207ENST00000451876 TDRD6O60522 2096 aaKnown RBP23.89■■□□□ 1.41
CPSF4-207ENST00000451876 ZNF806P0C7X5 589 aa23.88■■□□□ 1.41
CPSF4-207ENST00000451876 MYCLP1P12525 358 aaPredicted RBP23.88■■□□□ 1.41
CPSF4-207ENST00000451876 CTSKP43235 329 aa23.88■■□□□ 1.41
CPSF4-207ENST00000451876 THOP1P52888 689 aa23.88■■□□□ 1.41
CPSF4-207ENST00000451876 NFATC4Q14934 902 aa23.88■■□□□ 1.41
CPSF4-207ENST00000451876 KCTD16Q68DU8 428 aa23.88■■□□□ 1.41
CPSF4-207ENST00000451876 DTX3LQ8TDB6 740 aa23.88■■□□□ 1.41
CPSF4-207ENST00000451876 PEX13Q92968 403 aa23.88■■□□□ 1.41
CPSF4-207ENST00000451876 HDAC10Q969S8 669 aa23.88■■□□□ 1.41
CPSF4-207ENST00000451876 SPTY2D1-AS1A0A0U1RR47 76 aa23.88■■□□□ 1.41
CPSF4-207ENST00000451876 LNP1A1A4G5 178 aa23.88■■□□□ 1.41
CPSF4-207ENST00000451876 CCDC162PA2VCL2 907 aa23.88■■□□□ 1.41
CPSF4-207ENST00000451876 TMEM202A6NGA9 273 aa23.88■■□□□ 1.41
CPSF4-207ENST00000451876 TOR1BO14657 336 aa23.88■■□□□ 1.41
CPSF4-207ENST00000451876 KHNYNO15037 678 aaKnown RBP23.88■■□□□ 1.41
CPSF4-207ENST00000451876 SLU7O95391 586 aaKnown RBP23.88■■□□□ 1.41
CPSF4-207ENST00000451876 PYGLP06737 847 aa23.88■■□□□ 1.41
CPSF4-207ENST00000451876 PRSS56P0CW18 603 aa23.88■■□□□ 1.41
CPSF4-207ENST00000451876 TGM1P22735 817 aa23.88■■□□□ 1.41
CPSF4-207ENST00000451876 FZD2Q14332 565 aa23.88■■□□□ 1.41
CPSF4-207ENST00000451876 FASTKD3Q14CZ7 662 aaKnown RBP23.88■■□□□ 1.41
CPSF4-207ENST00000451876 DNAJC21Q5F1R6 531 aaKnown RBP23.88■■□□□ 1.41
CPSF4-207ENST00000451876 PRAMEF14Q5SWL7 426 aa23.88■■□□□ 1.41
CPSF4-207ENST00000451876 PDPK2PQ6A1A2 396 aa23.88■■□□□ 1.41
CPSF4-207ENST00000451876 STAMBPL1Q96FJ0 436 aa23.88■■□□□ 1.41
CPSF4-207ENST00000451876 COX14Q96I36 57 aa23.88■■□□□ 1.41
CPSF4-207ENST00000451876 HIC2Q96JB3 615 aa23.88■■□□□ 1.41
CPSF4-207ENST00000451876 FCRL3Q96P31 734 aaPredicted RBP23.88■■□□□ 1.41
CPSF4-207ENST00000451876 NUSAP1Q9BXS6 441 aaKnown RBP23.88■■□□□ 1.41
CPSF4-207ENST00000451876 PHPT1Q9NRX4 125 aaPredicted RBP23.88■■□□□ 1.41
CPSF4-207ENST00000451876 FAM114A2Q9NRY5 505 aa23.88■■□□□ 1.41
CPSF4-207ENST00000451876 OAS3Q9Y6K5 1087 aaKnown RBP23.88■■□□□ 1.41
CPSF4-207ENST00000451876 FAM237BA0A1B0GVD1 139 aa23.87■■□□□ 1.41
CPSF4-207ENST00000451876 E7ESA3 106 aa23.87■■□□□ 1.41
CPSF4-207ENST00000451876 CACNB4O00305 520 aaPredicted RBP23.87■■□□□ 1.41
CPSF4-207ENST00000451876 ARNTP27540 789 aa23.87■■□□□ 1.41
CPSF4-207ENST00000451876 ELK3P41970 407 aa23.87■■□□□ 1.41
CPSF4-207ENST00000451876 CDKN1CP49918 316 aaPredicted RBP23.87■■□□□ 1.41
CPSF4-207ENST00000451876 KIAA1024LP59773 190 aa23.87■■□□□ 1.41
CPSF4-207ENST00000451876 CAV1Q03135 178 aa23.87■■□□□ 1.41
CPSF4-207ENST00000451876 PDIA2Q13087 525 aaKnown RBP23.87■■□□□ 1.41
CPSF4-207ENST00000451876 NFATC2Q13469 925 aa23.87■■□□□ 1.41
CPSF4-207ENST00000451876 SMAD1Q15797 465 aaKnown RBP23.87■■□□□ 1.41
CPSF4-207ENST00000451876 MACC1Q6ZN28 852 aa23.87■■□□□ 1.41
CPSF4-207ENST00000451876 TMEM135Q86UB9 458 aa23.87■■□□□ 1.41
CPSF4-207ENST00000451876 ZNF398Q8TD17 642 aa23.87■■□□□ 1.41
CPSF4-207ENST00000451876 GLYATL1Q969I3 302 aa23.87■■□□□ 1.41
CPSF4-207ENST00000451876 SKA1Q96BD8 255 aa23.87■■□□□ 1.41
CPSF4-207ENST00000451876 ZNF669Q96BR6 464 aaPredicted RBP23.87■■□□□ 1.41
CPSF4-207ENST00000451876 VPS35Q96QK1 796 aa23.87■■□□□ 1.41
CPSF4-207ENST00000451876 FAM96AQ9H5X1 160 aa23.87■■□□□ 1.41
CPSF4-207ENST00000451876 ASB8Q9H765 288 aa23.87■■□□□ 1.41
CPSF4-207ENST00000451876 CHMP2BQ9UQN3 213 aa23.87■■□□□ 1.41
CPSF4-207ENST00000451876 TEX264Q9Y6I9 313 aa23.87■■□□□ 1.41
CPSF4-207ENST00000451876 RPS6KL1Q9Y6S9 549 aa23.87■■□□□ 1.41
CPSF4-207ENST00000451876 RIF1Q5UIP0 2472 aaKnown RBP23.86■■□□□ 1.41
CPSF4-207ENST00000451876 MAGEC1O60732 1142 aa23.86■■□□□ 1.41
CPSF4-207ENST00000451876 ENGP17813 658 aa23.86■■□□□ 1.41
CPSF4-207ENST00000451876 ECHS1P30084 290 aa23.86■■□□□ 1.41
CPSF4-207ENST00000451876 ITGA9Q13797 1035 aa23.86■■□□□ 1.41
CPSF4-207ENST00000451876 ZNF648Q5T619 568 aaPredicted RBP23.86■■□□□ 1.41
CPSF4-207ENST00000451876 ARMC3Q5W041 872 aa23.86■■□□□ 1.41
CPSF4-207ENST00000451876 PSAPL1Q6NUJ1 521 aa23.86■■□□□ 1.41
CPSF4-207ENST00000451876 PNPLA1Q8N8W4 532 aa23.86■■□□□ 1.41
CPSF4-207ENST00000451876 OR2I1PQ8NGU4 316 aa23.86■■□□□ 1.41
CPSF4-207ENST00000451876 BTN2A2Q8WVV5 523 aa23.86■■□□□ 1.41
CPSF4-207ENST00000451876 EBNA1BP2Q99848 306 aaKnown RBP23.86■■□□□ 1.41
CPSF4-207ENST00000451876 FGF22Q9HCT0 170 aa23.86■■□□□ 1.41
CPSF4-207ENST00000451876 GDF3Q9NR23 364 aa23.86■■□□□ 1.41
CPSF4-207ENST00000451876 RXFP3Q9NSD7 469 aa23.86■■□□□ 1.41
CPSF4-207ENST00000451876 SMOXQ9NWM0 555 aa23.86■■□□□ 1.41
CPSF4-207ENST00000451876 ZCWPW2A0A1B0GU75 182 aa23.85■■□□□ 1.41
CPSF4-207ENST00000451876 MAGEB16A2A368 324 aa23.85■■□□□ 1.41
CPSF4-207ENST00000451876 AGAP14A8MT82 685 aa23.85■■□□□ 1.41
CPSF4-207ENST00000451876 ARHGAP33O14559 1287 aa23.85■■□□□ 1.41
CPSF4-207ENST00000451876 LRP3O75074 770 aa23.85■■□□□ 1.41
CPSF4-207ENST00000451876 MTX2O75431 263 aa23.85■■□□□ 1.41
CPSF4-207ENST00000451876 SLC25A14O95258 325 aaPredicted RBP23.85■■□□□ 1.41
CPSF4-207ENST00000451876 GOT2P00505 430 aaKnown RBP23.85■■□□□ 1.41
CPSF4-207ENST00000451876 HOXC4P09017 264 aaPredicted RBP23.85■■□□□ 1.41
CPSF4-207ENST00000451876 FOXN2P32314 431 aa23.85■■□□□ 1.41
CPSF4-207ENST00000451876 CARSP49589 748 aaKnown RBP23.85■■□□□ 1.41
CPSF4-207ENST00000451876 PRAMEP78395 509 aa23.85■■□□□ 1.41
CPSF4-207ENST00000451876 CSRP2Q16527 193 aa23.85■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms