RNA–Protein interactions for RNA: ENST00000451218.6

USP46-202, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5 BASIC

Gene USP46, Length 4,622 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-202ENST00000451218 MRPL46Q9H2W6 279 aaKnown RBP6.55□□□□□ -1.36
USP46-202ENST00000451218 KLC4Q9NSK0 619 aa6.55□□□□□ -1.36
USP46-202ENST00000451218 CATSPERZQ9NTU4 200 aa6.55□□□□□ -1.36
USP46-202ENST00000451218 CNOT6Q9ULM6 557 aaKnown RBP6.55□□□□□ -1.36
USP46-202ENST00000451218 POM121CA8CG34 1229 aa6.54□□□□□ -1.36
USP46-202ENST00000451218 CDC7O00311 574 aa6.54□□□□□ -1.36
USP46-202ENST00000451218 HGSO14964 777 aaPredicted RBP6.54□□□□□ -1.36
USP46-202ENST00000451218 HOXC11O43248 304 aaPredicted RBP6.54□□□□□ -1.36
USP46-202ENST00000451218 CDK14O94921 469 aa6.54□□□□□ -1.36
USP46-202ENST00000451218 CLDN7O95471 211 aa6.54□□□□□ -1.36
USP46-202ENST00000451218 GLUD1P00367 558 aa6.54□□□□□ -1.36
USP46-202ENST00000451218 HOXB9P17482 250 aaPredicted RBP6.54□□□□□ -1.36
USP46-202ENST00000451218 TFEBP19484 476 aa6.54□□□□□ -1.36
USP46-202ENST00000451218 ARFIP2P53365 341 aa6.54□□□□□ -1.36
USP46-202ENST00000451218 ENPP2Q13822 863 aa6.54□□□□□ -1.36
USP46-202ENST00000451218 PABPC1LQ4VXU2 614 aaKnown RBP6.54□□□□□ -1.36
USP46-202ENST00000451218 TMEM259Q4ZIN3 620 aa6.54□□□□□ -1.36
USP46-202ENST00000451218 TRIM68Q6AZZ1 485 aa6.54□□□□□ -1.36
USP46-202ENST00000451218 TLDC1Q6P9B6 456 aa6.54□□□□□ -1.36
USP46-202ENST00000451218 PSRC1Q6PGN9 363 aaPredicted RBP6.54□□□□□ -1.36
USP46-202ENST00000451218 TRIM67Q6ZTA4 783 aa6.54□□□□□ -1.36
USP46-202ENST00000451218 TPGS1Q6ZTW0 290 aa6.54□□□□□ -1.36
USP46-202ENST00000451218 GLT6D1Q7Z4J2 308 aa6.54□□□□□ -1.36
USP46-202ENST00000451218 GRASPQ7Z6J2 395 aaPredicted RBP6.54□□□□□ -1.36
USP46-202ENST00000451218 GBP7Q8N8V2 638 aaPredicted RBP6.54□□□□□ -1.36
USP46-202ENST00000451218 SIDT2Q8NBJ9 832 aaKnown RBP6.54□□□□□ -1.36
USP46-202ENST00000451218 LPCAT1Q8NF37 534 aa6.54□□□□□ -1.36
USP46-202ENST00000451218 TTC8Q8TAM2 541 aa6.54□□□□□ -1.36
USP46-202ENST00000451218 AGAP11Q8TF27 550 aa6.54□□□□□ -1.36
USP46-202ENST00000451218 PDLIM5Q96HC4 596 aaKnown RBP6.54□□□□□ -1.36
USP46-202ENST00000451218 HHIPQ96QV1 700 aa6.54□□□□□ -1.36
USP46-202ENST00000451218 PANX3Q96QZ0 392 aa6.54□□□□□ -1.36
USP46-202ENST00000451218 S1PR5Q9H228 398 aa6.54□□□□□ -1.36
USP46-202ENST00000451218 MTG2Q9H4K7 406 aa6.54□□□□□ -1.36
USP46-202ENST00000451218 TASP1Q9H6P5 420 aa6.54□□□□□ -1.36
USP46-202ENST00000451218 SPHK2Q9NRA0 654 aa6.54□□□□□ -1.36
USP46-202ENST00000451218 EVLQ9UI08 416 aaPredicted RBP6.54□□□□□ -1.36
USP46-202ENST00000451218 CORO1CQ9ULV4 474 aaPredicted RBP6.54□□□□□ -1.36
USP46-202ENST00000451218 FADS2P1A8MWK0 482 aa6.54□□□□□ -1.36
USP46-202ENST00000451218 LINC01565O15544 149 aa6.54□□□□□ -1.36
USP46-202ENST00000451218 SIX3O95343 332 aaPredicted RBP6.54□□□□□ -1.36
USP46-202ENST00000451218 ADH1AP07327 375 aa6.54□□□□□ -1.36
USP46-202ENST00000451218 LTA4HP09960 611 aaKnown RBP6.54□□□□□ -1.36
USP46-202ENST00000451218 ITGAXP20702 1163 aa6.54□□□□□ -1.36
USP46-202ENST00000451218 IMPDH1P20839 514 aa6.54□□□□□ -1.36
USP46-202ENST00000451218 CES1P23141 567 aa6.54□□□□□ -1.36
USP46-202ENST00000451218 ACRV1P26436 265 aa6.54□□□□□ -1.36
USP46-202ENST00000451218 AGTR2P50052 363 aa6.54□□□□□ -1.36
USP46-202ENST00000451218 NAGLUP54802 743 aa6.54□□□□□ -1.36
USP46-202ENST00000451218 SEMG2Q02383 582 aa6.54□□□□□ -1.36
USP46-202ENST00000451218 SEPT6Q14141 434 aa6.54□□□□□ -1.36
USP46-202ENST00000451218 ZNF235Q14590 738 aa6.54□□□□□ -1.36
USP46-202ENST00000451218 DPY19L3Q6ZPD9 716 aa6.54□□□□□ -1.36
USP46-202ENST00000451218 MFN1Q8IWA4 741 aa6.54□□□□□ -1.36
USP46-202ENST00000451218 NPAS3Q8IXF0 933 aa6.54□□□□□ -1.36
USP46-202ENST00000451218 C7orf61Q8IZ16 206 aa6.54□□□□□ -1.36
USP46-202ENST00000451218 KIAA1958Q8N8K9 716 aa6.54□□□□□ -1.36
USP46-202ENST00000451218 IRF7Q92985 503 aa6.54□□□□□ -1.36
USP46-202ENST00000451218 KIAA1191Q96A73 305 aa6.54□□□□□ -1.36
USP46-202ENST00000451218 ACDQ96AP0 544 aa6.54□□□□□ -1.36
USP46-202ENST00000451218 CLPTM1LQ96KA5 538 aa6.54□□□□□ -1.36
USP46-202ENST00000451218 FERMT1Q9BQL6 677 aa6.54□□□□□ -1.36
USP46-202ENST00000451218 PBX4Q9BYU1 374 aa6.54□□□□□ -1.36
USP46-202ENST00000451218 TM6SF2Q9BZW4 377 aa6.54□□□□□ -1.36
USP46-202ENST00000451218 TMEM245Q9H330 911 aa6.54□□□□□ -1.36
USP46-202ENST00000451218 ACTL8Q9H568 366 aa6.54□□□□□ -1.36
USP46-202ENST00000451218 POMKQ9H5K3 350 aa6.54□□□□□ -1.36
USP46-202ENST00000451218 EBF2Q9HAK2 575 aa6.54□□□□□ -1.36
USP46-202ENST00000451218 ZFP69BQ9UJL9 534 aa6.54□□□□□ -1.36
USP46-202ENST00000451218 ACOT9Q9Y305 439 aa6.54□□□□□ -1.36
USP46-202ENST00000451218 RAP2CQ9Y3L5 183 aa6.54□□□□□ -1.36
USP46-202ENST00000451218 DNAJC15Q9Y5T4 150 aa6.54□□□□□ -1.36
USP46-202ENST00000451218 IKBKGQ9Y6K9 419 aa6.54□□□□□ -1.36
USP46-202ENST00000451218 ZFHX4Q86UP3 3567 aa6.54□□□□□ -1.36
USP46-202ENST00000451218 ASPMQ8IZT6 3477 aa6.54□□□□□ -1.36
USP46-202ENST00000451218 H3BNX3 289 aa6.54□□□□□ -1.36
USP46-202ENST00000451218 UBXN8O00124 270 aa6.54□□□□□ -1.36
USP46-202ENST00000451218 OR7A17O14581 309 aa6.54□□□□□ -1.36
USP46-202ENST00000451218 NPC1O15118 1278 aa6.54□□□□□ -1.36
USP46-202ENST00000451218 DCTN3O75935 186 aa6.54□□□□□ -1.36
USP46-202ENST00000451218 IPO13O94829 963 aaKnown RBP6.54□□□□□ -1.36
USP46-202ENST00000451218 CTPS1P17812 591 aa6.54□□□□□ -1.36
USP46-202ENST00000451218 PTPN4P29074 926 aa6.54□□□□□ -1.36
USP46-202ENST00000451218 AP1S1P61966 158 aa6.54□□□□□ -1.36
USP46-202ENST00000451218 PDE1BQ01064 536 aa6.54□□□□□ -1.36
USP46-202ENST00000451218 NFATC2Q13469 925 aa6.54□□□□□ -1.36
USP46-202ENST00000451218 CSHL1Q14406 222 aa6.54□□□□□ -1.36
USP46-202ENST00000451218 MPPE1Q53F39 396 aa6.54□□□□□ -1.36
USP46-202ENST00000451218 ACSBG2Q5FVE4 666 aa6.54□□□□□ -1.36
USP46-202ENST00000451218 LGSNQ5TDP6 509 aa6.54□□□□□ -1.36
USP46-202ENST00000451218 FAM45BPQ6NSW5 357 aa6.54□□□□□ -1.36
USP46-202ENST00000451218 SYCE2Q6PIF2 218 aa6.54□□□□□ -1.36
USP46-202ENST00000451218 OR2AP1Q8NGE2 309 aa6.54□□□□□ -1.36
USP46-202ENST00000451218 FAM45AQ8TCE6 357 aa6.54□□□□□ -1.36
USP46-202ENST00000451218 EEF1AKMT1Q8WVE0 214 aa6.54□□□□□ -1.36
USP46-202ENST00000451218 PPM1EQ8WY54 764 aa6.54□□□□□ -1.36
USP46-202ENST00000451218 TMA16Q96EY4 203 aaKnown RBP6.54□□□□□ -1.36
USP46-202ENST00000451218 ASB16Q96NS5 453 aa6.54□□□□□ -1.36
USP46-202ENST00000451218 TDP1Q9NUW8 608 aa6.54□□□□□ -1.36
USP46-202ENST00000451218 ZDHHC7Q9NXF8 308 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms