RNA–Protein interactions for RNA: ENST00000450169.6

LSM5-208, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM5, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-208ENST00000450169 C6orf62Q9GZU0 229 aaPredicted RBP8.59□□□□□ -1.03
LSM5-208ENST00000450169 FAM49AQ9H0Q0 323 aaPredicted RBP8.59□□□□□ -1.03
LSM5-208ENST00000450169 KCNN2Q9H2S1 579 aa8.59□□□□□ -1.03
LSM5-208ENST00000450169 TIGARQ9NQ88 270 aa8.59□□□□□ -1.03
LSM5-208ENST00000450169 PIH1D1Q9NWS0 290 aaKnown RBP8.59□□□□□ -1.03
LSM5-208ENST00000450169 TAS2R9Q9NYW1 312 aa8.59□□□□□ -1.03
LSM5-208ENST00000450169 DTLQ9NZJ0 730 aa8.59□□□□□ -1.03
LSM5-208ENST00000450169 OPTCQ9UBM4 332 aa8.59□□□□□ -1.03
LSM5-208ENST00000450169 NARFQ9UHQ1 456 aa8.59□□□□□ -1.03
LSM5-208ENST00000450169 PCDHGB1Q9Y5G3 927 aa8.59□□□□□ -1.03
LSM5-208ENST00000450169 PTPRJQ12913 1337 aa8.59□□□□□ -1.03
LSM5-208ENST00000450169 BRWD3Q6RI45 1802 aa8.59□□□□□ -1.03
LSM5-208ENST00000450169 CNTNAP1P78357 1384 aa8.59□□□□□ -1.03
LSM5-208ENST00000450169 H3BUI4 141 aa8.59□□□□□ -1.03
LSM5-208ENST00000450169 SLC1A7O00341 560 aa8.59□□□□□ -1.03
LSM5-208ENST00000450169 AP3D1O14617 1153 aa8.59□□□□□ -1.03
LSM5-208ENST00000450169 TBC1D4O60343 1298 aa8.59□□□□□ -1.03
LSM5-208ENST00000450169 ZNF780AO75290 641 aaPredicted RBP8.59□□□□□ -1.03
LSM5-208ENST00000450169 SEMA3DO95025 777 aa8.59□□□□□ -1.03
LSM5-208ENST00000450169 NDUFB10O96000 172 aa8.59□□□□□ -1.03
LSM5-208ENST00000450169 SLC4A1P02730 911 aa8.59□□□□□ -1.03
LSM5-208ENST00000450169 HMGCRP04035 888 aa8.59□□□□□ -1.03
LSM5-208ENST00000450169 RBP1P09455 135 aa8.59□□□□□ -1.03
LSM5-208ENST00000450169 SBK3P0C264 359 aa8.59□□□□□ -1.03
LSM5-208ENST00000450169 MLNP12872 115 aa8.59□□□□□ -1.03
LSM5-208ENST00000450169 ATF4P18848 351 aaPredicted RBP8.59□□□□□ -1.03
LSM5-208ENST00000450169 UQCRC1P31930 480 aa8.59□□□□□ -1.03
LSM5-208ENST00000450169 CDH5P33151 784 aaPredicted RBP8.59□□□□□ -1.03
LSM5-208ENST00000450169 GGT5P36269 586 aa8.59□□□□□ -1.03
LSM5-208ENST00000450169 WNT7BP56706 349 aa8.59□□□□□ -1.03
LSM5-208ENST00000450169 DSTNP60981 165 aa8.59□□□□□ -1.03
LSM5-208ENST00000450169 TRAF3Q13114 568 aa8.59□□□□□ -1.03
LSM5-208ENST00000450169 DMP1Q13316 513 aaPredicted RBP8.59□□□□□ -1.03
LSM5-208ENST00000450169 LINC01559Q495D7 138 aa8.59□□□□□ -1.03
LSM5-208ENST00000450169 PYCR3Q53H96 274 aa8.59□□□□□ -1.03
LSM5-208ENST00000450169 DALRD3Q5D0E6 543 aaKnown RBP8.59□□□□□ -1.03
LSM5-208ENST00000450169 TOR2AQ5JU69 321 aa8.59□□□□□ -1.03
LSM5-208ENST00000450169 BSPRYQ5W0U4 402 aa8.59□□□□□ -1.03
LSM5-208ENST00000450169 CDKL3Q8IVW4 592 aaPredicted RBP8.59□□□□□ -1.03
LSM5-208ENST00000450169 TMEM151AQ8N4L1 468 aa8.59□□□□□ -1.03
LSM5-208ENST00000450169 PARP16Q8N5Y8 322 aa8.59□□□□□ -1.03
LSM5-208ENST00000450169 CCNYL1Q8N7R7 359 aa8.59□□□□□ -1.03
LSM5-208ENST00000450169 APPL2Q8NEU8 664 aa8.59□□□□□ -1.03
LSM5-208ENST00000450169 ARNTL2Q8WYA1 636 aa8.59□□□□□ -1.03
LSM5-208ENST00000450169 MARVELD3Q96A59 401 aa8.59□□□□□ -1.03
LSM5-208ENST00000450169 AURKBQ96GD4 344 aaPredicted RBP8.59□□□□□ -1.03
LSM5-208ENST00000450169 NAT9Q9BTE0 207 aa8.59□□□□□ -1.03
LSM5-208ENST00000450169 TOR3AQ9H497 397 aa8.59□□□□□ -1.03
LSM5-208ENST00000450169 NDFIP2Q9NV92 336 aa8.59□□□□□ -1.03
LSM5-208ENST00000450169 ASNSD1Q9NWL6 643 aa8.59□□□□□ -1.03
LSM5-208ENST00000450169 GTSE1Q9NYZ3 720 aa8.59□□□□□ -1.03
LSM5-208ENST00000450169 MORF4L1Q9UBU8 362 aa8.59□□□□□ -1.03
LSM5-208ENST00000450169 TJP2Q9UDY2 1190 aa8.59□□□□□ -1.03
LSM5-208ENST00000450169 PNMA8BQ9ULN7 279 aaPredicted RBP8.59□□□□□ -1.03
LSM5-208ENST00000450169 FIS1Q9Y3D6 152 aa8.59□□□□□ -1.03
LSM5-208ENST00000450169 HCN4Q9Y3Q4 1203 aa8.59□□□□□ -1.03
LSM5-208ENST00000450169 GRIP1Q9Y3R0 1128 aa8.59□□□□□ -1.03
LSM5-208ENST00000450169 TCRBV5S2A0A599 114 aa8.58□□□□□ -1.04
LSM5-208ENST00000450169 MAGEB16A2A368 324 aa8.58□□□□□ -1.04
LSM5-208ENST00000450169 TMEM150BA6NC51 233 aa8.58□□□□□ -1.04
LSM5-208ENST00000450169 BBIP1A8MTZ0 92 aa8.58□□□□□ -1.04
LSM5-208ENST00000450169 ATP6V1G2-DDX39BF2Z307 99 aa8.58□□□□□ -1.04
LSM5-208ENST00000450169 PDHXO00330 501 aa8.58□□□□□ -1.04
LSM5-208ENST00000450169 KCNJ13O60928 360 aa8.58□□□□□ -1.04
LSM5-208ENST00000450169 CPNE3O75131 537 aaKnown RBP8.58□□□□□ -1.04
LSM5-208ENST00000450169 OR7A10O76100 309 aa8.58□□□□□ -1.04
LSM5-208ENST00000450169 ITGBL1O95965 494 aaPredicted RBP8.58□□□□□ -1.04
LSM5-208ENST00000450169 PRLP01236 227 aa8.58□□□□□ -1.04
LSM5-208ENST00000450169 POLBP06746 335 aa8.58□□□□□ -1.04
LSM5-208ENST00000450169 F7P08709 466 aaPredicted RBP8.58□□□□□ -1.04
LSM5-208ENST00000450169 IL7P13232 177 aa8.58□□□□□ -1.04
LSM5-208ENST00000450169 IFI30P13284 250 aa8.58□□□□□ -1.04
LSM5-208ENST00000450169 ACVR2AP27037 513 aa8.58□□□□□ -1.04
LSM5-208ENST00000450169 ABCG1P45844 678 aa8.58□□□□□ -1.04
LSM5-208ENST00000450169 GLRBP48167 497 aa8.58□□□□□ -1.04
LSM5-208ENST00000450169 MAP3K7CLP57077 242 aa8.58□□□□□ -1.04
LSM5-208ENST00000450169 POU5F1BQ06416 359 aa8.58□□□□□ -1.04
LSM5-208ENST00000450169 CD47Q08722 323 aa8.58□□□□□ -1.04
LSM5-208ENST00000450169 INCA1Q0VD86 236 aa8.58□□□□□ -1.04
LSM5-208ENST00000450169 GPR50Q13585 617 aa8.58□□□□□ -1.04
LSM5-208ENST00000450169 DGCR6Q14129 220 aa8.58□□□□□ -1.04
LSM5-208ENST00000450169 FRG1Q14331 258 aaKnown RBP8.58□□□□□ -1.04
LSM5-208ENST00000450169 HSDL1Q3SXM5 330 aa8.58□□□□□ -1.04
LSM5-208ENST00000450169 CES3Q6UWW8 571 aa8.58□□□□□ -1.04
LSM5-208ENST00000450169 BEND5Q7L4P6 421 aa8.58□□□□□ -1.04
LSM5-208ENST00000450169 LAPTM4BQ86VI4 370 aa8.58□□□□□ -1.04
LSM5-208ENST00000450169 LRRC20Q8TCA0 184 aa8.58□□□□□ -1.04
LSM5-208ENST00000450169 SEPT1Q8WYJ6 367 aa8.58□□□□□ -1.04
LSM5-208ENST00000450169 FOXJ1Q92949 421 aa8.58□□□□□ -1.04
LSM5-208ENST00000450169 SCYL1Q96KG9 808 aa8.58□□□□□ -1.04
LSM5-208ENST00000450169 RPL10LQ96L21 214 aaKnown RBP8.58□□□□□ -1.04
LSM5-208ENST00000450169 HEXIM2Q96MH2 286 aaKnown RBP8.58□□□□□ -1.04
LSM5-208ENST00000450169 TSNARE1Q96NA8 513 aa8.58□□□□□ -1.04
LSM5-208ENST00000450169 TM9SF2Q99805 663 aa8.58□□□□□ -1.04
LSM5-208ENST00000450169 SMOC2Q9H3U7 446 aa8.58□□□□□ -1.04
LSM5-208ENST00000450169 RAVER2Q9HCJ3 691 aaKnown RBP8.58□□□□□ -1.04
LSM5-208ENST00000450169 KMT5AQ9NQR1 393 aa8.58□□□□□ -1.04
LSM5-208ENST00000450169 FAM118AQ9NWS6 357 aa8.58□□□□□ -1.04
LSM5-208ENST00000450169 INTS6Q9UL03 887 aaKnown RBP8.58□□□□□ -1.04
LSM5-208ENST00000450169 CFL2Q9Y281 166 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms