RNA–Protein interactions for RNA: ENST00000450148.5

MSH5-209, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 1,000 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-209ENST00000450148 GLOD4Q9HC38 313 aa12.26□□□□□ -0.45
MSH5-209ENST00000450148 CPNE5Q9HCH3 593 aa12.26□□□□□ -0.45
MSH5-209ENST00000450148 MAGEE1Q9HCI5 957 aa12.26□□□□□ -0.45
MSH5-209ENST00000450148 SEPT10Q9P0V9 454 aa12.26□□□□□ -0.45
MSH5-209ENST00000450148 NFKBIL1Q9UBC1 381 aaPredicted RBP12.26□□□□□ -0.45
MSH5-209ENST00000450148 ACSL6Q9UKU0 697 aa12.26□□□□□ -0.45
MSH5-209ENST00000450148 PCDHGA7Q9Y5G6 932 aa12.26□□□□□ -0.45
MSH5-209ENST00000450148 PCDHA13Q9Y5I0 950 aa12.26□□□□□ -0.45
MSH5-209ENST00000450148 ADGRG1Q9Y653 693 aa12.26□□□□□ -0.45
MSH5-209ENST00000450148 BPTFQ12830 3046 aa12.26□□□□□ -0.45
MSH5-209ENST00000450148 LOC400499M0QZD8 3231 aa12.26□□□□□ -0.45
MSH5-209ENST00000450148 ZNF106Q9H2Y7 1883 aaKnown RBP12.25□□□□□ -0.45
MSH5-209ENST00000450148 TEX51A0A1B0GUA7 166 aa12.25□□□□□ -0.45
MSH5-209ENST00000450148 A6NCN8 305 aa12.25□□□□□ -0.45
MSH5-209ENST00000450148 RCCD1A6NED2 376 aa12.25□□□□□ -0.45
MSH5-209ENST00000450148 ATXN7O15265 892 aaPredicted RBP12.25□□□□□ -0.45
MSH5-209ENST00000450148 KLK10O43240 276 aa12.25□□□□□ -0.45
MSH5-209ENST00000450148 ASMTLO95671 621 aa12.25□□□□□ -0.45
MSH5-209ENST00000450148 CPNE6O95741 557 aa12.25□□□□□ -0.45
MSH5-209ENST00000450148 ITIH1P19827 911 aa12.25□□□□□ -0.45
MSH5-209ENST00000450148 CD1CP29017 333 aa12.25□□□□□ -0.45
MSH5-209ENST00000450148 SLC5A2P31639 672 aa12.25□□□□□ -0.45
MSH5-209ENST00000450148 GPR3P46089 330 aa12.25□□□□□ -0.45
MSH5-209ENST00000450148 FASLGP48023 281 aa12.25□□□□□ -0.45
MSH5-209ENST00000450148 DCDC1P59894 354 aa12.25□□□□□ -0.45
MSH5-209ENST00000450148 CXADRP78310 365 aa12.25□□□□□ -0.45
MSH5-209ENST00000450148 CDK18Q07002 472 aa12.25□□□□□ -0.45
MSH5-209ENST00000450148 CLN3Q13286 438 aa12.25□□□□□ -0.45
MSH5-209ENST00000450148 SQSTM1Q13501 440 aa12.25□□□□□ -0.45
MSH5-209ENST00000450148 LRP8Q14114 963 aa12.25□□□□□ -0.45
MSH5-209ENST00000450148 TFDP2Q14188 446 aa12.25□□□□□ -0.45
MSH5-209ENST00000450148 C16orf72Q14CZ0 275 aa12.25□□□□□ -0.45
MSH5-209ENST00000450148 C11orf63Q6NUN7 778 aa12.25□□□□□ -0.45
MSH5-209ENST00000450148 KDELC1Q6UW63 502 aa12.25□□□□□ -0.45
MSH5-209ENST00000450148 KDELC2Q7Z4H8 507 aa12.25□□□□□ -0.45
MSH5-209ENST00000450148 CCDC170Q8IYT3 715 aa12.25□□□□□ -0.45
MSH5-209ENST00000450148 KATNAL2Q8IYT4 538 aa12.25□□□□□ -0.45
MSH5-209ENST00000450148 SFRP1Q8N474 314 aa12.25□□□□□ -0.45
MSH5-209ENST00000450148 CCHCR1Q8TD31 782 aa12.25□□□□□ -0.45
MSH5-209ENST00000450148 KRT35Q92764 455 aa12.25□□□□□ -0.45
MSH5-209ENST00000450148 HERPUD2Q9BSE4 406 aa12.25□□□□□ -0.45
MSH5-209ENST00000450148 RBSNQ9H1K0 784 aa12.25□□□□□ -0.45
MSH5-209ENST00000450148 SHOC2Q9UQ13 582 aa12.25□□□□□ -0.45
MSH5-209ENST00000450148 ZNF711Q9Y462 761 aa12.25□□□□□ -0.45
MSH5-209ENST00000450148 PRKAB1Q9Y478 270 aa12.25□□□□□ -0.45
MSH5-209ENST00000450148 LOXL2Q9Y4K0 774 aa12.25□□□□□ -0.45
MSH5-209ENST00000450148 SPO11Q9Y5K1 396 aa12.25□□□□□ -0.45
MSH5-209ENST00000450148 IGHV1OR21-1A0A087WYE8 117 aa12.24□□□□□ -0.45
MSH5-209ENST00000450148 LOC285095A0A1B0GVY8 99 aa12.24□□□□□ -0.45
MSH5-209ENST00000450148 RHPN2P1A8MT19 583 aa12.24□□□□□ -0.45
MSH5-209ENST00000450148 AURKAO14965 403 aa12.24□□□□□ -0.45
MSH5-209ENST00000450148 EFSO43281 561 aa12.24□□□□□ -0.45
MSH5-209ENST00000450148 NUAK1O60285 661 aa12.24□□□□□ -0.45
MSH5-209ENST00000450148 C1QL1O75973 258 aa12.24□□□□□ -0.45
MSH5-209ENST00000450148 NDST3O95803 873 aa12.24□□□□□ -0.45
MSH5-209ENST00000450148 ALDH4A1P30038 563 aa12.24□□□□□ -0.45
MSH5-209ENST00000450148 CSF2RBP32927 897 aa12.24□□□□□ -0.45
MSH5-209ENST00000450148 ZNF75DP51815 510 aa12.24□□□□□ -0.45
MSH5-209ENST00000450148 UCNP55089 124 aa12.24□□□□□ -0.45
MSH5-209ENST00000450148 TMPRSS3P57727 454 aa12.24□□□□□ -0.45
MSH5-209ENST00000450148 PCSK7Q16549 785 aa12.24□□□□□ -0.45
MSH5-209ENST00000450148 CLPPQ16740 277 aaPredicted RBP12.24□□□□□ -0.45
MSH5-209ENST00000450148 TFDP3Q5H9I0 405 aa12.24□□□□□ -0.45
MSH5-209ENST00000450148 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.24□□□□□ -0.45
MSH5-209ENST00000450148 ZNF648Q5T619 568 aaPredicted RBP12.24□□□□□ -0.45
MSH5-209ENST00000450148 KAZNQ674X7 775 aa12.24□□□□□ -0.45
MSH5-209ENST00000450148 USP53Q70EK8 1073 aa12.24□□□□□ -0.45
MSH5-209ENST00000450148 BZW1Q7L1Q6 419 aaKnown RBP12.24□□□□□ -0.45
MSH5-209ENST00000450148 PIM3Q86V86 326 aa12.24□□□□□ -0.45
MSH5-209ENST00000450148 GALNT13Q8IUC8 556 aa12.24□□□□□ -0.45
MSH5-209ENST00000450148 SLC37A2Q8TED4 501 aa12.24□□□□□ -0.45
MSH5-209ENST00000450148 TFB1MQ8WVM0 346 aaKnown RBP12.24□□□□□ -0.45
MSH5-209ENST00000450148 TMEM159Q96B96 161 aa12.24□□□□□ -0.45
MSH5-209ENST00000450148 MRFAP1L1Q96HT8 127 aa12.24□□□□□ -0.45
MSH5-209ENST00000450148 CARD9Q9H257 536 aa12.24□□□□□ -0.45
MSH5-209ENST00000450148 RMI1Q9H9A7 625 aa12.24□□□□□ -0.45
MSH5-209ENST00000450148 ARFGAP3Q9NP61 516 aa12.24□□□□□ -0.45
MSH5-209ENST00000450148 UBP1Q9NZI7 540 aa12.24□□□□□ -0.45
MSH5-209ENST00000450148 ATXN10Q9UBB4 475 aa12.24□□□□□ -0.45
MSH5-209ENST00000450148 TBC1D29Q9UFV1 150 aa12.24□□□□□ -0.45
MSH5-209ENST00000450148 PISDQ9UG56 409 aa12.24□□□□□ -0.45
MSH5-209ENST00000450148 TMPRSS11EQ9UL52 423 aa12.24□□□□□ -0.45
MSH5-209ENST00000450148 REXO2Q9Y3B8 237 aaKnown RBP12.24□□□□□ -0.45
MSH5-209ENST00000450148 TRBV23OR9-2A0A075B6M9 112 aa12.23□□□□□ -0.45
MSH5-209ENST00000450148 IGHV5-10-1A0A0J9YXX1 117 aa12.23□□□□□ -0.45
MSH5-209ENST00000450148 PRR19A6NJB7 356 aa12.23□□□□□ -0.45
MSH5-209ENST00000450148 SOWAHDA6NJG2 315 aa12.23□□□□□ -0.45
MSH5-209ENST00000450148 C9orf172C9J069 976 aa12.23□□□□□ -0.45
MSH5-209ENST00000450148 CHUKO15111 745 aa12.23□□□□□ -0.45
MSH5-209ENST00000450148 NVLO15381 856 aaKnown RBP12.23□□□□□ -0.45
MSH5-209ENST00000450148 PMPCBO75439 489 aa12.23□□□□□ -0.45
MSH5-209ENST00000450148 ZRANB2O95218 330 aaKnown RBP eCLIP12.23□□□□□ -0.45
MSH5-209ENST00000450148 ZNF8P17098 575 aaPredicted RBP12.23□□□□□ -0.45
MSH5-209ENST00000450148 BPIP17213 487 aa12.23□□□□□ -0.45
MSH5-209ENST00000450148 NFKB1P19838 968 aa12.23□□□□□ -0.45
MSH5-209ENST00000450148 ARSDP51689 593 aa12.23□□□□□ -0.45
MSH5-209ENST00000450148 LIMK2P53671 638 aa12.23□□□□□ -0.45
MSH5-209ENST00000450148 PEX6Q13608 980 aa12.23□□□□□ -0.45
MSH5-209ENST00000450148 NOMO1Q15155 1222 aa12.23□□□□□ -0.45
MSH5-209ENST00000450148 PPP2R5EQ16537 467 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms