RNA–Protein interactions for RNA: ENST00000450066.6

USP39-207, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-207ENST00000450066 C16orf96A6NNT2 1141 aa14.17□□□□□ -0.14
USP39-207ENST00000450066 AGAP14A8MT82 685 aa14.17□□□□□ -0.14
USP39-207ENST00000450066 PYGLP06737 847 aa14.17□□□□□ -0.14
USP39-207ENST00000450066 RBP1P09455 135 aa14.17□□□□□ -0.14
USP39-207ENST00000450066 HLA-EP13747 358 aa14.17□□□□□ -0.14
USP39-207ENST00000450066 ZNF37AP17032 561 aaPredicted RBP14.17□□□□□ -0.14
USP39-207ENST00000450066 PRKAA2P54646 552 aa14.17□□□□□ -0.14
USP39-207ENST00000450066 ITGA9Q13797 1035 aa14.17□□□□□ -0.14
USP39-207ENST00000450066 ARHGEF7Q14155 803 aa14.17□□□□□ -0.14
USP39-207ENST00000450066 ELAVL3Q14576 367 aaKnown RBP14.17□□□□□ -0.14
USP39-207ENST00000450066 CHRNA6Q15825 494 aa14.17□□□□□ -0.14
USP39-207ENST00000450066 LRRC73Q5JTD7 316 aa14.17□□□□□ -0.14
USP39-207ENST00000450066 SERPINA13PQ6UXR4 307 aa14.17□□□□□ -0.14
USP39-207ENST00000450066 NUDT18Q6ZVK8 323 aa14.17□□□□□ -0.14
USP39-207ENST00000450066 YTHDF3Q7Z739 585 aaKnown RBP14.17□□□□□ -0.14
USP39-207ENST00000450066 TTC7BQ86TV6 843 aa14.17□□□□□ -0.14
USP39-207ENST00000450066 SERPINA9Q86WD7 417 aa14.17□□□□□ -0.14
USP39-207ENST00000450066 OR8D1Q8WZ84 308 aa14.17□□□□□ -0.14
USP39-207ENST00000450066 SUSD6Q92537 303 aa14.17□□□□□ -0.14
USP39-207ENST00000450066 KCNJ9Q92806 393 aa14.17□□□□□ -0.14
USP39-207ENST00000450066 C20orf27Q9GZN8 174 aa14.17□□□□□ -0.14
USP39-207ENST00000450066 SYTL2Q9HCH5 934 aa14.17□□□□□ -0.14
USP39-207ENST00000450066 NPHS2Q9NP85 383 aa14.17□□□□□ -0.14
USP39-207ENST00000450066 THAP10Q9P2Z0 257 aaPredicted RBP14.17□□□□□ -0.14
USP39-207ENST00000450066 PPM1HQ9ULR3 514 aa14.17□□□□□ -0.14
USP39-207ENST00000450066 PCDHB1Q9Y5F3 818 aa14.17□□□□□ -0.14
USP39-207ENST00000450066 OAS3Q9Y6K5 1087 aaKnown RBP14.17□□□□□ -0.14
USP39-207ENST00000450066 NUMBLQ9Y6R0 609 aa14.17□□□□□ -0.14
USP39-207ENST00000450066 PRMT5O14744 637 aaPredicted RBP14.16□□□□□ -0.14
USP39-207ENST00000450066 C1SP09871 688 aa14.16□□□□□ -0.14
USP39-207ENST00000450066 ZNF7P17097 686 aaPredicted RBP14.16□□□□□ -0.14
USP39-207ENST00000450066 XPAP23025 273 aaPredicted RBP14.16□□□□□ -0.14
USP39-207ENST00000450066 ACRV1P26436 265 aa14.16□□□□□ -0.14
USP39-207ENST00000450066 SKIV2L2P42285 1042 aaKnown RBP14.16□□□□□ -0.14
USP39-207ENST00000450066 SLC1A6P48664 564 aa14.16□□□□□ -0.14
USP39-207ENST00000450066 SPINT3P49223 89 aa14.16□□□□□ -0.14
USP39-207ENST00000450066 HTR4Q13639 388 aa14.16□□□□□ -0.14
USP39-207ENST00000450066 SETMARQ53H47 684 aaPredicted RBP14.16□□□□□ -0.14
USP39-207ENST00000450066 TECRLQ5HYJ1 363 aa14.16□□□□□ -0.14
USP39-207ENST00000450066 CTSL3PQ5NE16 218 aa14.16□□□□□ -0.14
USP39-207ENST00000450066 LIPMQ5VYY2 423 aa14.16□□□□□ -0.14
USP39-207ENST00000450066 CRLF3Q8IUI8 442 aa14.16□□□□□ -0.14
USP39-207ENST00000450066 RBFAQ8N0V3 343 aa14.16□□□□□ -0.14
USP39-207ENST00000450066 THOC1Q96FV9 657 aaKnown RBP14.16□□□□□ -0.14
USP39-207ENST00000450066 ZNF395Q9H8N7 513 aaPredicted RBP14.16□□□□□ -0.14
USP39-207ENST00000450066 FAM50BQ9Y247 325 aa14.16□□□□□ -0.14
USP39-207ENST00000450066 ATXN2Q99700 1313 aaKnown RBP14.16□□□□□ -0.14
USP39-207ENST00000450066 ANHXE9PGG2 379 aa14.16□□□□□ -0.14
USP39-207ENST00000450066 VPS26AO75436 327 aa14.16□□□□□ -0.14
USP39-207ENST00000450066 APODP05090 189 aa14.16□□□□□ -0.14
USP39-207ENST00000450066 RPS3P23396 243 aaKnown RBP eCLIP14.16□□□□□ -0.143e-13■■■■□ 26.3
USP39-207ENST00000450066 DPPA4Q7L190 304 aa14.16□□□□□ -0.14
USP39-207ENST00000450066 C10orf82Q8WW14 230 aa14.16□□□□□ -0.14
USP39-207ENST00000450066 UNKQ9C0B0 810 aaKnown RBP14.16□□□□□ -0.14
USP39-207ENST00000450066 PKD2L2Q9NZM6 624 aa14.16□□□□□ -0.14
USP39-207ENST00000450066 CRLS1Q9UJA2 301 aa14.16□□□□□ -0.14
USP39-207ENST00000450066 SARDHQ9UL12 918 aa14.16□□□□□ -0.14
USP39-207ENST00000450066 USH1CQ9Y6N9 552 aa14.16□□□□□ -0.14
USP39-207ENST00000450066 GOLGA8CPA6NN73 597 aa14.15□□□□□ -0.14
USP39-207ENST00000450066 TMEM114B3SHH9 223 aa14.15□□□□□ -0.14
USP39-207ENST00000450066 KPNA3O00505 521 aaPredicted RBP14.15□□□□□ -0.14
USP39-207ENST00000450066 DLX3O60479 287 aa14.15□□□□□ -0.14
USP39-207ENST00000450066 CD1DP15813 335 aa14.15□□□□□ -0.14
USP39-207ENST00000450066 UGT1A6P19224 532 aa14.15□□□□□ -0.14
USP39-207ENST00000450066 UGT1A1P22309 533 aa14.15□□□□□ -0.14
USP39-207ENST00000450066 UGT1A4P22310 534 aa14.15□□□□□ -0.14
USP39-207ENST00000450066 ITGB7P26010 798 aa14.15□□□□□ -0.14
USP39-207ENST00000450066 UGT1A3P35503 534 aa14.15□□□□□ -0.14
USP39-207ENST00000450066 UGT1A5P35504 534 aa14.15□□□□□ -0.14
USP39-207ENST00000450066 ABCE1P61221 599 aaKnown RBP14.15□□□□□ -0.14
USP39-207ENST00000450066 ASPHQ12797 758 aa14.15□□□□□ -0.14
USP39-207ENST00000450066 ERAP2Q6P179 960 aa14.15□□□□□ -0.14
USP39-207ENST00000450066 PAQR3Q6TCH7 311 aa14.15□□□□□ -0.14
USP39-207ENST00000450066 PARS2Q7L3T8 475 aaKnown RBP14.15□□□□□ -0.14
USP39-207ENST00000450066 ISCA2Q86U28 154 aa14.15□□□□□ -0.14
USP39-207ENST00000450066 NXPE1Q8N323 547 aa14.15□□□□□ -0.14
USP39-207ENST00000450066 DTX3LQ8TDB6 740 aa14.15□□□□□ -0.14
USP39-207ENST00000450066 FAM129BQ96TA1 746 aa14.15□□□□□ -0.14
USP39-207ENST00000450066 GPR21Q99679 349 aa14.15□□□□□ -0.14
USP39-207ENST00000450066 CLPBQ9H078 707 aa14.15□□□□□ -0.14
USP39-207ENST00000450066 SUN2Q9UH99 717 aa14.15□□□□□ -0.14
USP39-207ENST00000450066 CD207Q9UJ71 328 aa14.15□□□□□ -0.14
USP39-207ENST00000450066 HCN2Q9UL51 889 aa14.15□□□□□ -0.14
USP39-207ENST00000450066 MTF2Q9Y483 593 aaPredicted RBP14.15□□□□□ -0.14
USP39-207ENST00000450066 A0A1W2PPC1 479 aa14.14□□□□□ -0.15
USP39-207ENST00000450066 RGSL1A5PLK6 1076 aa14.14□□□□□ -0.15
USP39-207ENST00000450066 CCT8L1PA6NM43 557 aa14.14□□□□□ -0.15
USP39-207ENST00000450066 ITM2AO43736 263 aa14.14□□□□□ -0.15
USP39-207ENST00000450066 NIPSNAP2O75323 286 aa14.14□□□□□ -0.15
USP39-207ENST00000450066 TFEBP19484 476 aa14.14□□□□□ -0.15
USP39-207ENST00000450066 IGFBP4P22692 258 aa14.14□□□□□ -0.15
USP39-207ENST00000450066 ATP5F1P24539 256 aaPredicted RBP14.14□□□□□ -0.15
USP39-207ENST00000450066 CA5AP35218 305 aa14.14□□□□□ -0.15
USP39-207ENST00000450066 MMP12P39900 470 aa14.14□□□□□ -0.15
USP39-207ENST00000450066 IL12RB1P42701 662 aa14.14□□□□□ -0.15
USP39-207ENST00000450066 DCDC1P59894 354 aa14.14□□□□□ -0.15
USP39-207ENST00000450066 PFKPQ01813 784 aa14.14□□□□□ -0.15
USP39-207ENST00000450066 POM121L1PQ3SYA9 428 aa14.14□□□□□ -0.15
USP39-207ENST00000450066 UGT3A1Q6NUS8 523 aa14.14□□□□□ -0.15
USP39-207ENST00000450066 NAPRTQ6XQN6 538 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms