RNA–Protein interactions for RNA: ENST00000449223.3

RPS28-202, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 1,523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-202ENST00000449223 ULK4Q96C45 1275 aa19.15■□□□□ 0.66
RPS28-202ENST00000449223 VPS39Q96JC1 886 aa19.15■□□□□ 0.66
RPS28-202ENST00000449223 ABCG8Q9H221 673 aa19.15■□□□□ 0.66
RPS28-202ENST00000449223 SGK2Q9HBY8 427 aa19.15■□□□□ 0.66
RPS28-202ENST00000449223 NUMA1Q14980 2115 aa19.15■□□□□ 0.66
RPS28-202ENST00000449223 IGLV3-16A0A075B6K0 115 aa19.15■□□□□ 0.66
RPS28-202ENST00000449223 DCXO43602 365 aa19.15■□□□□ 0.66
RPS28-202ENST00000449223 TM7SF2O76062 418 aa19.15■□□□□ 0.66
RPS28-202ENST00000449223 HAUS5O94927 633 aa19.15■□□□□ 0.66
RPS28-202ENST00000449223 PRSS56P0CW18 603 aa19.15■□□□□ 0.66
RPS28-202ENST00000449223 ACRV1P26436 265 aa19.15■□□□□ 0.66
RPS28-202ENST00000449223 PMLP29590 882 aa19.15■□□□□ 0.66
RPS28-202ENST00000449223 CDKN1CP49918 316 aaPredicted RBP19.15■□□□□ 0.66
RPS28-202ENST00000449223 CSRP3P50461 194 aa19.15■□□□□ 0.66
RPS28-202ENST00000449223 CLCN5P51795 746 aa19.15■□□□□ 0.66
RPS28-202ENST00000449223 ZNF284Q2VY69 593 aa19.15■□□□□ 0.66
RPS28-202ENST00000449223 ATP13A5Q4VNC0 1218 aa19.15■□□□□ 0.66
RPS28-202ENST00000449223 NXPE1Q8N323 547 aa19.15■□□□□ 0.66
RPS28-202ENST00000449223 FLCNQ8NFG4 579 aa19.15■□□□□ 0.66
RPS28-202ENST00000449223 GANCQ8TET4 914 aa19.15■□□□□ 0.66
RPS28-202ENST00000449223 SCAMP4Q969E2 229 aa19.15■□□□□ 0.66
RPS28-202ENST00000449223 AP2M1Q96CW1 435 aa19.15■□□□□ 0.66
RPS28-202ENST00000449223 NUS1Q96E22 293 aa19.15■□□□□ 0.66
RPS28-202ENST00000449223 C1QTNF2Q9BXJ5 285 aa19.15■□□□□ 0.66
RPS28-202ENST00000449223 FBXO6Q9NRD1 293 aaPredicted RBP19.15■□□□□ 0.66
RPS28-202ENST00000449223 ZFR2Q9UPR6 939 aaKnown RBP19.15■□□□□ 0.66
RPS28-202ENST00000449223 GPR39O43194 453 aa19.14■□□□□ 0.65
RPS28-202ENST00000449223 SOD1P00441 154 aa19.14■□□□□ 0.65
RPS28-202ENST00000449223 PTGER3P43115 390 aa19.14■□□□□ 0.65
RPS28-202ENST00000449223 MAGEA12P43365 314 aa19.14■□□□□ 0.65
RPS28-202ENST00000449223 MTAPQ13126 283 aa19.14■□□□□ 0.65
RPS28-202ENST00000449223 ITIH4Q14624 930 aa19.14■□□□□ 0.65
RPS28-202ENST00000449223 ZNF789Q5FWF6 425 aa19.14■□□□□ 0.65
RPS28-202ENST00000449223 CNSTQ6PJW8 725 aa19.14■□□□□ 0.65
RPS28-202ENST00000449223 TRIM69Q86WT6 500 aa19.14■□□□□ 0.65
RPS28-202ENST00000449223 OTUD6BQ8N6M0 293 aa19.14■□□□□ 0.65
RPS28-202ENST00000449223 UHRF1Q96T88 793 aaPredicted RBP19.14■□□□□ 0.65
RPS28-202ENST00000449223 TTC1Q99614 292 aa19.14■□□□□ 0.65
RPS28-202ENST00000449223 RIOK2Q9BVS4 552 aaKnown RBP19.14■□□□□ 0.65
RPS28-202ENST00000449223 BTBD1Q9H0C5 482 aa19.14■□□□□ 0.65
RPS28-202ENST00000449223 CENPHQ9H3R5 247 aa19.14■□□□□ 0.65
RPS28-202ENST00000449223 CD84Q9UIB8 345 aa19.14■□□□□ 0.65
RPS28-202ENST00000449223 FNDC3AQ9Y2H6 1198 aaKnown RBP19.14■□□□□ 0.65
RPS28-202ENST00000449223 IGLON5A6NGN9 336 aa19.13■□□□□ 0.65
RPS28-202ENST00000449223 TRIM49D1C9J1S8 452 aa19.13■□□□□ 0.65
RPS28-202ENST00000449223 H3BQF6 201 aa19.13■□□□□ 0.65
RPS28-202ENST00000449223 STK25O00506 426 aa19.13■□□□□ 0.65
RPS28-202ENST00000449223 LZTS3O60299 673 aaPredicted RBP19.13■□□□□ 0.65
RPS28-202ENST00000449223 ZNF217O75362 1048 aa19.13■□□□□ 0.65
RPS28-202ENST00000449223 PCDH8O95206 1070 aa19.13■□□□□ 0.65
RPS28-202ENST00000449223 APBB3O95704 486 aa19.13■□□□□ 0.65
RPS28-202ENST00000449223 ALDOAP04075 364 aaKnown RBP19.13■□□□□ 0.65
RPS28-202ENST00000449223 PYGLP06737 847 aa19.13■□□□□ 0.65
RPS28-202ENST00000449223 TEAD1P28347 426 aa19.13■□□□□ 0.65
RPS28-202ENST00000449223 OXTRP30559 389 aa19.13■□□□□ 0.65
RPS28-202ENST00000449223 DBN1Q16643 649 aa19.13■□□□□ 0.65
RPS28-202ENST00000449223 MROH9Q5TGP6 573 aa19.13■□□□□ 0.65
RPS28-202ENST00000449223 ANO7Q6IWH7 933 aa19.13■□□□□ 0.65
RPS28-202ENST00000449223 SH2D5Q6ZV89 423 aa19.13■□□□□ 0.65
RPS28-202ENST00000449223 MTERF4Q7Z6M4 381 aaKnown RBP19.13■□□□□ 0.65
RPS28-202ENST00000449223 LDB1Q86U70 411 aaPredicted RBP19.13■□□□□ 0.65
RPS28-202ENST00000449223 SERPINA9Q86WD7 417 aa19.13■□□□□ 0.65
RPS28-202ENST00000449223 HORMAD1Q86X24 394 aa19.13■□□□□ 0.65
RPS28-202ENST00000449223 OR2T34Q8NGX1 318 aa19.13■□□□□ 0.65
RPS28-202ENST00000449223 HHIPQ96QV1 700 aa19.13■□□□□ 0.65
RPS28-202ENST00000449223 SPATA16Q9BXB7 569 aa19.13■□□□□ 0.65
RPS28-202ENST00000449223 CD93Q9NPY3 652 aa19.13■□□□□ 0.65
RPS28-202ENST00000449223 CRLS1Q9UJA2 301 aa19.13■□□□□ 0.65
RPS28-202ENST00000449223 TMPRSS11EQ9UL52 423 aa19.13■□□□□ 0.65
RPS28-202ENST00000449223 COQ6Q9Y2Z9 468 aa19.13■□□□□ 0.65
RPS28-202ENST00000449223 FADS2P1A8MWK0 482 aa19.12■□□□□ 0.65
RPS28-202ENST00000449223 NDUFS3O75489 264 aa19.12■□□□□ 0.65
RPS28-202ENST00000449223 RFPL1O75677 317 aa19.12■□□□□ 0.65
RPS28-202ENST00000449223 KRT15P19012 456 aa19.12■□□□□ 0.65
RPS28-202ENST00000449223 UGT1A6P19224 532 aa19.12■□□□□ 0.65
RPS28-202ENST00000449223 CD9P21926 228 aa19.12■□□□□ 0.65
RPS28-202ENST00000449223 UGT1A1P22309 533 aa19.12■□□□□ 0.65
RPS28-202ENST00000449223 UGT1A4P22310 534 aa19.12■□□□□ 0.65
RPS28-202ENST00000449223 RPS3P23396 243 aaKnown RBP eCLIP19.12■□□□□ 0.654e-9■■■■□ 19.5
RPS28-202ENST00000449223 CA5AP35218 305 aa19.12■□□□□ 0.65
RPS28-202ENST00000449223 UGT1A3P35503 534 aa19.12■□□□□ 0.65
RPS28-202ENST00000449223 UGT1A5P35504 534 aa19.12■□□□□ 0.65
RPS28-202ENST00000449223 BMPR2Q13873 1038 aa19.12■□□□□ 0.65
RPS28-202ENST00000449223 SEL1L3Q68CR1 1132 aa19.12■□□□□ 0.65
RPS28-202ENST00000449223 EXOC3L1Q86VI1 746 aa19.12■□□□□ 0.65
RPS28-202ENST00000449223 RBFAQ8N0V3 343 aa19.12■□□□□ 0.65
RPS28-202ENST00000449223 DCLK2Q8N568 766 aa19.12■□□□□ 0.65
RPS28-202ENST00000449223 DDHD1Q8NEL9 900 aa19.12■□□□□ 0.65
RPS28-202ENST00000449223 ACMSDQ8TDX5 336 aa19.12■□□□□ 0.65
RPS28-202ENST00000449223 ZBTB9Q96C00 473 aa19.12■□□□□ 0.65
RPS28-202ENST00000449223 BIRC8Q96P09 236 aa19.12■□□□□ 0.65
RPS28-202ENST00000449223 P2RY12Q9H244 342 aa19.12■□□□□ 0.65
RPS28-202ENST00000449223 FAM96AQ9H5X1 160 aa19.12■□□□□ 0.65
RPS28-202ENST00000449223 ZDHHC3Q9NYG2 299 aa19.12■□□□□ 0.65
RPS28-202ENST00000449223 CAMSAP3Q9P1Y5 1249 aaPredicted RBP19.12■□□□□ 0.65
RPS28-202ENST00000449223 BCCIPQ9P287 314 aaKnown RBP eCLIP19.12■□□□□ 0.65
RPS28-202ENST00000449223 NOVA2Q9UNW9 492 aaKnown RBP19.12■□□□□ 0.65
RPS28-202ENST00000449223 MTO1Q9Y2Z2 717 aaKnown RBP19.12■□□□□ 0.65
RPS28-202ENST00000449223 COMMD10Q9Y6G5 202 aa19.12■□□□□ 0.65
RPS28-202ENST00000449223 LRRC72A6NJI9 287 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms