RNA–Protein interactions for RNA: ENST00000445593.6

LAPTM4B-201, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

TSL 1 (best) BASIC

Gene LAPTM4B, Length 3,173 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-201ENST00000445593 C18orf21Q32NC0 220 aaPredicted RBP16.73■□□□□ 0.27
LAPTM4B-201ENST00000445593 HABP4Q5JVS0 413 aaKnown RBP16.73■□□□□ 0.27
LAPTM4B-201ENST00000445593 ISLR2Q6UXK2 745 aa16.73■□□□□ 0.27
LAPTM4B-201ENST00000445593 CHST9Q7L1S5 443 aa16.73■□□□□ 0.27
LAPTM4B-201ENST00000445593 LCA5Q86VQ0 697 aa16.73■□□□□ 0.27
LAPTM4B-201ENST00000445593 HJURPQ8NCD3 748 aaPredicted RBP16.73■□□□□ 0.27
LAPTM4B-201ENST00000445593 OVCA2Q8WZ82 227 aa16.73■□□□□ 0.27
LAPTM4B-201ENST00000445593 ERLEC1Q96DZ1 483 aa16.73■□□□□ 0.27
LAPTM4B-201ENST00000445593 LINGO1Q96FE5 620 aa16.73■□□□□ 0.27
LAPTM4B-201ENST00000445593 CDK15Q96Q40 435 aa16.73■□□□□ 0.27
LAPTM4B-201ENST00000445593 C1orf232A0A0U1RR37 186 aa16.72■□□□□ 0.27
LAPTM4B-201ENST00000445593 TRPC5OSA6NMA1 111 aa16.72■□□□□ 0.27
LAPTM4B-201ENST00000445593 IMPDH1P20839 514 aa16.72■□□□□ 0.27
LAPTM4B-201ENST00000445593 DPP6P42658 865 aa16.72■□□□□ 0.27
LAPTM4B-201ENST00000445593 AP2B1P63010 937 aa16.72■□□□□ 0.27
LAPTM4B-201ENST00000445593 LAMB3Q13751 1172 aa16.72■□□□□ 0.27
LAPTM4B-201ENST00000445593 SETMARQ53H47 684 aaPredicted RBP16.72■□□□□ 0.27
LAPTM4B-201ENST00000445593 PPFIBP2Q8ND30 876 aa16.72■□□□□ 0.27
LAPTM4B-201ENST00000445593 ACTRT2Q8TDY3 377 aa16.72■□□□□ 0.27
LAPTM4B-201ENST00000445593 ASB1Q9Y576 335 aa16.72■□□□□ 0.27
LAPTM4B-201ENST00000445593 CLASP2O75122 1294 aaKnown RBP16.72■□□□□ 0.27
LAPTM4B-201ENST00000445593 ECI2O75521 394 aa16.72■□□□□ 0.27
LAPTM4B-201ENST00000445593 CXCL14O95715 111 aa16.72■□□□□ 0.27
LAPTM4B-201ENST00000445593 MTHFD2P13995 350 aa16.72■□□□□ 0.27
LAPTM4B-201ENST00000445593 XRCC1P18887 633 aaPredicted RBP16.72■□□□□ 0.27
LAPTM4B-201ENST00000445593 RALGDSQ12967 914 aa16.72■□□□□ 0.27
LAPTM4B-201ENST00000445593 PITRM1Q5JRX3 1037 aa16.72■□□□□ 0.27
LAPTM4B-201ENST00000445593 METTL21CQ5VZV1 264 aa16.72■□□□□ 0.27
LAPTM4B-201ENST00000445593 PLPP4Q5VZY2 271 aa16.72■□□□□ 0.27
LAPTM4B-201ENST00000445593 NCEH1Q6PIU2 408 aa16.72■□□□□ 0.27
LAPTM4B-201ENST00000445593 PAOXQ6QHF9 649 aa16.72■□□□□ 0.27
LAPTM4B-201ENST00000445593 FBXW8Q8N3Y1 598 aa16.72■□□□□ 0.27
LAPTM4B-201ENST00000445593 FBXO39Q8N4B4 442 aa16.72■□□□□ 0.27
LAPTM4B-201ENST00000445593 DDX50Q9BQ39 737 aaKnown RBP16.72■□□□□ 0.27
LAPTM4B-201ENST00000445593 RTKNQ9BST9 563 aa16.72■□□□□ 0.27
LAPTM4B-201ENST00000445593 WDR41Q9HAD4 459 aa16.72■□□□□ 0.27
LAPTM4B-201ENST00000445593 ZBTB26Q9HCK0 441 aa16.72■□□□□ 0.27
LAPTM4B-201ENST00000445593 TRMT6Q9UJA5 497 aaKnown RBP16.72■□□□□ 0.27
LAPTM4B-201ENST00000445593 PKP3Q9Y446 797 aa16.72■□□□□ 0.27
LAPTM4B-201ENST00000445593 CLDN7O95471 211 aa16.71■□□□□ 0.27
LAPTM4B-201ENST00000445593 GUCA1CO95843 209 aa16.71■□□□□ 0.27
LAPTM4B-201ENST00000445593 LAG3P18627 525 aa16.71■□□□□ 0.27
LAPTM4B-201ENST00000445593 DNAJB13P59910 316 aa16.71■□□□□ 0.27
LAPTM4B-201ENST00000445593 RAD51Q06609 339 aa16.71■□□□□ 0.27
LAPTM4B-201ENST00000445593 FASTKQ14296 549 aaKnown RBP16.71■□□□□ 0.27
LAPTM4B-201ENST00000445593 ALG1LQ6GMV1 187 aa16.71■□□□□ 0.27
LAPTM4B-201ENST00000445593 CAPRIN2Q6IMN6 1127 aaKnown RBP16.71■□□□□ 0.27
LAPTM4B-201ENST00000445593 IZUMO2Q6UXV1 221 aa16.71■□□□□ 0.27
LAPTM4B-201ENST00000445593 RAB44Q7Z6P3 723 aaPredicted RBP16.71■□□□□ 0.27
LAPTM4B-201ENST00000445593 SLC22A9Q8IVM8 553 aa16.71■□□□□ 0.27
LAPTM4B-201ENST00000445593 B4GALNT2Q8NHY0 566 aa16.71■□□□□ 0.27
LAPTM4B-201ENST00000445593 UCMAQ8WVF2 138 aa16.71■□□□□ 0.27
LAPTM4B-201ENST00000445593 ZNF689Q96CS4 500 aaPredicted RBP16.71■□□□□ 0.27
LAPTM4B-201ENST00000445593 CCDC126Q96EE4 140 aa16.71■□□□□ 0.27
LAPTM4B-201ENST00000445593 TCEAL4Q96EI5 215 aa16.71■□□□□ 0.27
LAPTM4B-201ENST00000445593 MYO19Q96H55 970 aa16.71■□□□□ 0.27
LAPTM4B-201ENST00000445593 TRIM8Q9BZR9 551 aa16.71■□□□□ 0.27
LAPTM4B-201ENST00000445593 LSM7Q9UK45 103 aaKnown RBP16.71■□□□□ 0.27
LAPTM4B-201ENST00000445593 RPL26L1Q9UNX3 145 aaKnown RBP16.71■□□□□ 0.27
LAPTM4B-201ENST00000445593 SLC30A1Q9Y6M5 507 aa16.71■□□□□ 0.27
LAPTM4B-201ENST00000445593 SLCO1B7G3V0H7 640 aa16.71■□□□□ 0.27
LAPTM4B-201ENST00000445593 PIP5K1BO14986 540 aa16.71■□□□□ 0.27
LAPTM4B-201ENST00000445593 CDK14O94921 469 aa16.71■□□□□ 0.27
LAPTM4B-201ENST00000445593 HERVK_113P63132 956 aa16.71■□□□□ 0.27
LAPTM4B-201ENST00000445593 MRPS22P82650 360 aaKnown RBP16.71■□□□□ 0.27
LAPTM4B-201ENST00000445593 TNK2Q07912 1038 aa16.71■□□□□ 0.27
LAPTM4B-201ENST00000445593 LMAN2Q12907 356 aa16.71■□□□□ 0.27
LAPTM4B-201ENST00000445593 CTSL3PQ5NE16 218 aa16.71■□□□□ 0.27
LAPTM4B-201ENST00000445593 ARMC12Q5T9G4 340 aa16.71■□□□□ 0.27
LAPTM4B-201ENST00000445593 UGT3A1Q6NUS8 523 aa16.71■□□□□ 0.27
LAPTM4B-201ENST00000445593 BIRC8Q96P09 236 aa16.71■□□□□ 0.27
LAPTM4B-201ENST00000445593 ERVK-6Q9BXR3 956 aa16.71■□□□□ 0.27
LAPTM4B-201ENST00000445593 ABCB8Q9NUT2 735 aa16.71■□□□□ 0.27
LAPTM4B-201ENST00000445593 FAM8A1Q9UBU6 413 aa16.71■□□□□ 0.27
LAPTM4B-201ENST00000445593 ZNF711Q9Y462 761 aa16.71■□□□□ 0.27
LAPTM4B-201ENST00000445593 SLC4A7Q9Y6M7 1214 aa16.71■□□□□ 0.27
LAPTM4B-201ENST00000445593 F8W8V4 182 aa16.71■□□□□ 0.26
LAPTM4B-201ENST00000445593 TRIM24O15164 1050 aa16.71■□□□□ 0.26
LAPTM4B-201ENST00000445593 MAP3K7O43318 606 aa16.71■□□□□ 0.26
LAPTM4B-201ENST00000445593 TRIM16O95361 564 aa16.71■□□□□ 0.26
LAPTM4B-201ENST00000445593 PKMP14618 531 aaKnown RBP16.71■□□□□ 0.26
LAPTM4B-201ENST00000445593 OGNP20774 298 aaKnown RBP16.71■□□□□ 0.26
LAPTM4B-201ENST00000445593 POM121L1PQ3SYA9 428 aa16.71■□□□□ 0.26
LAPTM4B-201ENST00000445593 ACBD5Q5T8D3 534 aaPredicted RBP16.71■□□□□ 0.26
LAPTM4B-201ENST00000445593 TSPAN33Q86UF1 283 aa16.71■□□□□ 0.26
LAPTM4B-201ENST00000445593 TCEAL8Q8IYN2 117 aa16.71■□□□□ 0.26
LAPTM4B-201ENST00000445593 AFAP1L2Q8N4X5 818 aa16.71■□□□□ 0.26
LAPTM4B-201ENST00000445593 TRMT2BQ96GJ1 504 aaKnown RBP16.71■□□□□ 0.26
LAPTM4B-201ENST00000445593 ZNF333Q96JL9 665 aa16.71■□□□□ 0.26
LAPTM4B-201ENST00000445593 CD274Q9NZQ7 290 aa16.71■□□□□ 0.26
LAPTM4B-201ENST00000445593 DNAJC15Q9Y5T4 150 aa16.71■□□□□ 0.26
LAPTM4B-201ENST00000445593 AK5Q9Y6K8 562 aa16.71■□□□□ 0.26
LAPTM4B-201ENST00000445593 ANAPC1Q9H1A4 1944 aa16.7■□□□□ 0.26
LAPTM4B-201ENST00000445593 HIDE1A8MVS5 230 aa16.7■□□□□ 0.26
LAPTM4B-201ENST00000445593 SLC14A2Q15849 920 aa16.7■□□□□ 0.26
LAPTM4B-201ENST00000445593 BNC2Q6ZN30 1099 aaPredicted RBP16.7■□□□□ 0.26
LAPTM4B-201ENST00000445593 RNF111Q6ZNA4 994 aa16.7■□□□□ 0.26
LAPTM4B-201ENST00000445593 DDX53Q86TM3 631 aaKnown RBP16.7■□□□□ 0.26
LAPTM4B-201ENST00000445593 ZNF784Q8NCA9 323 aaPredicted RBP16.7■□□□□ 0.26
LAPTM4B-201ENST00000445593 TUBGCP3Q96CW5 907 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms