RNA–Protein interactions for RNA: ENST00000445369.2

CLDN9-201, Transcript of claudin 9, humanhuman

APPRIS P1 BASIC

Gene CLDN9, Length 2,050 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN9-201ENST00000445369 VPS9D1Q9Y2B5 631 aa17.73■□□□□ 0.43
CLDN9-201ENST00000445369 MICAL3Q7RTP6 2002 aa17.73■□□□□ 0.43
CLDN9-201ENST00000445369 C15orf38-AP3S2A0A0A6YYH1 394 aa17.72■□□□□ 0.43
CLDN9-201ENST00000445369 ANKRD66B4E2M5 251 aa17.72■□□□□ 0.43
CLDN9-201ENST00000445369 CDC7O00311 574 aa17.72■□□□□ 0.43
CLDN9-201ENST00000445369 TSPAN3O60637 253 aa17.72■□□□□ 0.43
CLDN9-201ENST00000445369 PYGLP06737 847 aa17.72■□□□□ 0.43
CLDN9-201ENST00000445369 CD9P21926 228 aa17.72■□□□□ 0.43
CLDN9-201ENST00000445369 MC4RP32245 332 aa17.72■□□□□ 0.43
CLDN9-201ENST00000445369 RHDQ02161 417 aa17.72■□□□□ 0.43
CLDN9-201ENST00000445369 TRAF2Q12933 501 aa17.72■□□□□ 0.43
CLDN9-201ENST00000445369 CTSL3PQ5NE16 218 aa17.72■□□□□ 0.43
CLDN9-201ENST00000445369 RNF219Q5W0B1 726 aaPredicted RBP17.72■□□□□ 0.43
CLDN9-201ENST00000445369 LAYNQ6UX15 382 aa17.72■□□□□ 0.43
CLDN9-201ENST00000445369 FAM43BQ6ZT52 329 aaPredicted RBP17.72■□□□□ 0.43
CLDN9-201ENST00000445369 C16orf59Q7L2K0 433 aa17.72■□□□□ 0.43
CLDN9-201ENST00000445369 ARPINQ7Z6K5 226 aa17.72■□□□□ 0.43
CLDN9-201ENST00000445369 NKAPQ8N5F7 415 aaKnown RBP17.72■□□□□ 0.43
CLDN9-201ENST00000445369 RIN3Q8TB24 985 aa17.72■□□□□ 0.43
CLDN9-201ENST00000445369 DUS3LQ96G46 650 aaKnown RBP17.72■□□□□ 0.43
CLDN9-201ENST00000445369 MYRFLQ96LU7 910 aa17.72■□□□□ 0.43
CLDN9-201ENST00000445369 SLC30A3Q99726 388 aa17.72■□□□□ 0.43
CLDN9-201ENST00000445369 RNF38Q9H0F5 515 aa17.72■□□□□ 0.43
CLDN9-201ENST00000445369 PIDD1Q9HB75 910 aa17.72■□□□□ 0.43
CLDN9-201ENST00000445369 TRPM5Q9NZQ8 1165 aa17.72■□□□□ 0.43
CLDN9-201ENST00000445369 AFF4Q9UHB7 1163 aaKnown RBP17.72■□□□□ 0.43
CLDN9-201ENST00000445369 POLG2Q9UHN1 485 aa17.72■□□□□ 0.43
CLDN9-201ENST00000445369 TCRBV3S1A0A5B6 114 aa17.71■□□□□ 0.43
CLDN9-201ENST00000445369 NPEPPSL1A6NEC2 478 aa17.71■□□□□ 0.43
CLDN9-201ENST00000445369 SYCE1LA8MT33 242 aa17.71■□□□□ 0.43
CLDN9-201ENST00000445369 STX16O14662 325 aa17.71■□□□□ 0.43
CLDN9-201ENST00000445369 TMCC1O94876 653 aa17.71■□□□□ 0.43
CLDN9-201ENST00000445369 TSPAN12O95859 305 aa17.71■□□□□ 0.43
CLDN9-201ENST00000445369 FESP07332 822 aa17.71■□□□□ 0.43
CLDN9-201ENST00000445369 IRF1P10914 325 aa17.71■□□□□ 0.43
CLDN9-201ENST00000445369 PKMP14618 531 aaKnown RBP17.71■□□□□ 0.43
CLDN9-201ENST00000445369 ANKS6Q68DC2 871 aa17.71■□□□□ 0.43
CLDN9-201ENST00000445369 MFN1Q8IWA4 741 aa17.71■□□□□ 0.43
CLDN9-201ENST00000445369 DDIASQ8IXT1 998 aa17.71■□□□□ 0.43
CLDN9-201ENST00000445369 MIER2Q8N344 545 aa17.71■□□□□ 0.43
CLDN9-201ENST00000445369 TTC30BQ8N4P2 665 aa17.71■□□□□ 0.43
CLDN9-201ENST00000445369 PCYOX1LQ8NBM8 494 aa17.71■□□□□ 0.43
CLDN9-201ENST00000445369 GPATCH1Q9BRR8 931 aaKnown RBP17.71■□□□□ 0.43
CLDN9-201ENST00000445369 KLF16Q9BXK1 252 aaPredicted RBP17.71■□□□□ 0.43
CLDN9-201ENST00000445369 ADGRE3Q9BY15 652 aa17.71■□□□□ 0.43
CLDN9-201ENST00000445369 MUC3BQ9H195 1237 aa17.71■□□□□ 0.43
CLDN9-201ENST00000445369 Q9H521 79 aa17.71■□□□□ 0.43
CLDN9-201ENST00000445369 SLC24A3Q9HC58 644 aa17.71■□□□□ 0.43
CLDN9-201ENST00000445369 NR5A2O00482 541 aa17.71■□□□□ 0.43
CLDN9-201ENST00000445369 VPS26AO75436 327 aa17.71■□□□□ 0.43
CLDN9-201ENST00000445369 MATN4O95460 622 aa17.71■□□□□ 0.43
CLDN9-201ENST00000445369 LBPP18428 481 aa17.71■□□□□ 0.43
CLDN9-201ENST00000445369 TTPAP49638 278 aa17.71■□□□□ 0.43
CLDN9-201ENST00000445369 SLC7A2P52569 658 aa17.71■□□□□ 0.43
CLDN9-201ENST00000445369 NAA20P61599 178 aa17.71■□□□□ 0.43
CLDN9-201ENST00000445369 NCEH1Q6PIU2 408 aa17.71■□□□□ 0.43
CLDN9-201ENST00000445369 CLSTN3Q9BQT9 956 aa17.71■□□□□ 0.43
CLDN9-201ENST00000445369 SLC39A3Q9BRY0 314 aa17.71■□□□□ 0.43
CLDN9-201ENST00000445369 CFHR5Q9BXR6 569 aa17.71■□□□□ 0.43
CLDN9-201ENST00000445369 SEMA4BQ9NPR2 832 aaPredicted RBP17.71■□□□□ 0.43
CLDN9-201ENST00000445369 SDR39U1Q9NRG7 319 aaPredicted RBP17.71■□□□□ 0.43
CLDN9-201ENST00000445369 CNOT11Q9UKZ1 510 aaKnown RBP17.71■□□□□ 0.43
CLDN9-201ENST00000445369 BTRCQ9Y297 605 aa17.71■□□□□ 0.43
CLDN9-201ENST00000445369 AP4S1Q9Y587 144 aa17.71■□□□□ 0.43
CLDN9-201ENST00000445369 AP4B1Q9Y6B7 739 aa17.71■□□□□ 0.43
CLDN9-201ENST00000445369 C2orf78A6NCI8 922 aa17.7■□□□□ 0.42
CLDN9-201ENST00000445369 H7C0S8 307 aa17.7■□□□□ 0.42
CLDN9-201ENST00000445369 BTN3A1O00481 513 aa17.7■□□□□ 0.42
CLDN9-201ENST00000445369 AHCYL1O43865 530 aa17.7■□□□□ 0.42
CLDN9-201ENST00000445369 OR1I1O60431 355 aa17.7■□□□□ 0.42
CLDN9-201ENST00000445369 SNAP91O60641 907 aa17.7■□□□□ 0.42
CLDN9-201ENST00000445369 NIPSNAP2O75323 286 aa17.7■□□□□ 0.42
CLDN9-201ENST00000445369 GRIA2P42262 883 aa17.7■□□□□ 0.42
CLDN9-201ENST00000445369 ALDH7A1P49419 539 aaKnown RBP17.7■□□□□ 0.42
CLDN9-201ENST00000445369 EFHBQ8N7U6 833 aa17.7■□□□□ 0.42
CLDN9-201ENST00000445369 CD200R1Q8TD46 325 aa17.7■□□□□ 0.42
CLDN9-201ENST00000445369 ZNF483Q8TF39 744 aaPredicted RBP17.7■□□□□ 0.42
CLDN9-201ENST00000445369 SLCO4A1Q96BD0 722 aa17.7■□□□□ 0.42
CLDN9-201ENST00000445369 TUBGCP3Q96CW5 907 aa17.7■□□□□ 0.42
CLDN9-201ENST00000445369 CYP2S1Q96SQ9 504 aa17.7■□□□□ 0.42
CLDN9-201ENST00000445369 SEZ6LQ9BYH1 1024 aa17.7■□□□□ 0.42
CLDN9-201ENST00000445369 MAP10Q9P2G4 905 aa17.7■□□□□ 0.42
CLDN9-201ENST00000445369 HSFX1Q9UBD0 423 aa17.7■□□□□ 0.42
CLDN9-201ENST00000445369 LHX3Q9UBR4 397 aa17.7■□□□□ 0.42
CLDN9-201ENST00000445369 STOML2Q9UJZ1 356 aa17.7■□□□□ 0.42
CLDN9-201ENST00000445369 NDUFAF1Q9Y375 327 aa17.7■□□□□ 0.42
CLDN9-201ENST00000445369 VPS4BO75351 444 aa17.7■□□□□ 0.42
CLDN9-201ENST00000445369 C1RP00736 705 aa17.7■□□□□ 0.42
CLDN9-201ENST00000445369 LINC00032P0C843 101 aa17.7■□□□□ 0.42
CLDN9-201ENST00000445369 PRR35P0CG20 571 aa17.7■□□□□ 0.42
CLDN9-201ENST00000445369 CAPN3P20807 821 aa17.7■□□□□ 0.42
CLDN9-201ENST00000445369 CLCN4P51793 760 aa17.7■□□□□ 0.42
CLDN9-201ENST00000445369 NME5P56597 212 aa17.7■□□□□ 0.42
CLDN9-201ENST00000445369 PLD1Q13393 1074 aa17.7■□□□□ 0.42
CLDN9-201ENST00000445369 LIN52Q52LA3 116 aa17.7■□□□□ 0.42
CLDN9-201ENST00000445369 FBXO48Q5FWF7 155 aa17.7■□□□□ 0.42
CLDN9-201ENST00000445369 OGFOD2Q6N063 350 aa17.7■□□□□ 0.42
CLDN9-201ENST00000445369 TXNDC11Q6PKC3 985 aa17.7■□□□□ 0.42
CLDN9-201ENST00000445369 LINGO4Q6UY18 593 aa17.7■□□□□ 0.42
CLDN9-201ENST00000445369 ZNF783Q6ZMS7 281 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms