RNA–Protein interactions for RNA: ENST00000444896.1

HMGB3P6-201, Transcript of high mobility group box 3 pseudogene 6, humanhuman

BASIC

Gene HMGB3P6, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P6-201ENST00000444896 NAP1L1P55209 391 aaKnown RBP4.5□□□□□ -1.69
HMGB3P6-201ENST00000444896 TUBA1BP68363 451 aa4.5□□□□□ -1.69
HMGB3P6-201ENST00000444896 ZXDBP98169 803 aa4.5□□□□□ -1.69
HMGB3P6-201ENST00000444896 KIF5AQ12840 1032 aa4.5□□□□□ -1.69
HMGB3P6-201ENST00000444896 ZNF155Q12901 538 aaPredicted RBP4.5□□□□□ -1.69
HMGB3P6-201ENST00000444896 NAB2Q15742 525 aa4.5□□□□□ -1.69
HMGB3P6-201ENST00000444896 LCE1AQ5T7P2 110 aa4.5□□□□□ -1.69
HMGB3P6-201ENST00000444896 SPATA1Q5VX52 437 aa4.5□□□□□ -1.69
HMGB3P6-201ENST00000444896 DUS1LQ6P1R4 473 aaKnown RBP4.5□□□□□ -1.69
HMGB3P6-201ENST00000444896 ZNF517Q6ZMY9 492 aaPredicted RBP4.5□□□□□ -1.69
HMGB3P6-201ENST00000444896 CACNA2D4Q7Z3S7 1137 aa4.5□□□□□ -1.69
HMGB3P6-201ENST00000444896 PCGF5Q86SE9 256 aa4.5□□□□□ -1.69
HMGB3P6-201ENST00000444896 ZNF34Q8IZ26 560 aa4.5□□□□□ -1.69
HMGB3P6-201ENST00000444896 ADGRF2Q8IZF7 708 aa4.5□□□□□ -1.69
HMGB3P6-201ENST00000444896 SMRP1Q8NCR6 262 aa4.5□□□□□ -1.69
HMGB3P6-201ENST00000444896 APBB2Q92870 758 aa4.5□□□□□ -1.69
HMGB3P6-201ENST00000444896 NSUN4Q96CB9 384 aaKnown RBP4.5□□□□□ -1.69
HMGB3P6-201ENST00000444896 ELMOD3Q96FG2 381 aa4.5□□□□□ -1.69
HMGB3P6-201ENST00000444896 PGAM5Q96HS1 289 aa4.5□□□□□ -1.69
HMGB3P6-201ENST00000444896 HARBI1Q96MB7 349 aa4.5□□□□□ -1.69
HMGB3P6-201ENST00000444896 TIGD1Q96MW7 591 aa4.5□□□□□ -1.69
HMGB3P6-201ENST00000444896 PCYT2Q99447 389 aa4.5□□□□□ -1.69
HMGB3P6-201ENST00000444896 SRSF8Q9BRL6 282 aaKnown RBP4.5□□□□□ -1.69
HMGB3P6-201ENST00000444896 SH2D4AQ9H788 454 aa4.5□□□□□ -1.69
HMGB3P6-201ENST00000444896 SYNCQ9H7C4 482 aa4.5□□□□□ -1.69
HMGB3P6-201ENST00000444896 COPG2Q9UBF2 871 aa4.5□□□□□ -1.69
HMGB3P6-201ENST00000444896 FBXL17Q9UF56 701 aa4.5□□□□□ -1.69
HMGB3P6-201ENST00000444896 ZNF215Q9UL58 517 aaPredicted RBP4.5□□□□□ -1.69
HMGB3P6-201ENST00000444896 R3HDM2Q9Y2K5 976 aaKnown RBP4.5□□□□□ -1.69
HMGB3P6-201ENST00000444896 NFS1Q9Y697 457 aa4.5□□□□□ -1.69
HMGB3P6-201ENST00000444896 GCC2Q8IWJ2 1684 aa4.5□□□□□ -1.69
HMGB3P6-201ENST00000444896 GRIN2AQ12879 1464 aa4.49□□□□□ -1.69
HMGB3P6-201ENST00000444896 MIA2Q96PC5 1412 aa4.49□□□□□ -1.69
HMGB3P6-201ENST00000444896 UACAQ9BZF9 1416 aa4.49□□□□□ -1.69
HMGB3P6-201ENST00000444896 IGLV5-37A0A075B6J1 123 aa4.49□□□□□ -1.69
HMGB3P6-201ENST00000444896 MID1O15344 667 aa4.49□□□□□ -1.69
HMGB3P6-201ENST00000444896 CLTBP09497 229 aa4.49□□□□□ -1.69
HMGB3P6-201ENST00000444896 ALOX12P18054 663 aa4.49□□□□□ -1.69
HMGB3P6-201ENST00000444896 PSMB10P40306 273 aa4.49□□□□□ -1.69
HMGB3P6-201ENST00000444896 APOBEC1P41238 236 aaKnown RBP4.49□□□□□ -1.69
HMGB3P6-201ENST00000444896 PIK3CAP42336 1068 aa4.49□□□□□ -1.69
HMGB3P6-201ENST00000444896 CLNS1AP54105 237 aaKnown RBP4.49□□□□□ -1.69
HMGB3P6-201ENST00000444896 NLRP5P59047 1200 aa4.49□□□□□ -1.69
HMGB3P6-201ENST00000444896 TAS2R40P59535 323 aa4.49□□□□□ -1.69
HMGB3P6-201ENST00000444896 SEC61BP60468 96 aaKnown RBP4.49□□□□□ -1.69
HMGB3P6-201ENST00000444896 CSNK2A1P68400 391 aaPredicted RBP4.49□□□□□ -1.69
HMGB3P6-201ENST00000444896 ZBED6P86452 979 aa4.49□□□□□ -1.69
HMGB3P6-201ENST00000444896 MC1RQ01726 317 aa4.49□□□□□ -1.69
HMGB3P6-201ENST00000444896 DLG1Q12959 904 aa4.49□□□□□ -1.69
HMGB3P6-201ENST00000444896 HLFQ16534 295 aa4.49□□□□□ -1.69
HMGB3P6-201ENST00000444896 ATP13A5Q4VNC0 1218 aa4.49□□□□□ -1.69
HMGB3P6-201ENST00000444896 WDR78Q5VTH9 848 aa4.49□□□□□ -1.69
HMGB3P6-201ENST00000444896 TMEM198Q66K66 360 aa4.49□□□□□ -1.69
HMGB3P6-201ENST00000444896 KIAA1161Q6NSJ0 714 aa4.49□□□□□ -1.69
HMGB3P6-201ENST00000444896 KCTD18Q6PI47 426 aaPredicted RBP4.49□□□□□ -1.69
HMGB3P6-201ENST00000444896 SZRD1Q7Z422 152 aa4.49□□□□□ -1.69
HMGB3P6-201ENST00000444896 TICAM1Q8IUC6 712 aa4.49□□□□□ -1.69
HMGB3P6-201ENST00000444896 PCDH20Q8N6Y1 951 aaKnown RBP4.49□□□□□ -1.69
HMGB3P6-201ENST00000444896 CSNK2A3Q8NEV1 391 aa4.49□□□□□ -1.69
HMGB3P6-201ENST00000444896 HMGCLL1Q8TB92 370 aa4.49□□□□□ -1.69
HMGB3P6-201ENST00000444896 NUDCD2Q8WVJ2 157 aa4.49□□□□□ -1.69
HMGB3P6-201ENST00000444896 ORAI1Q96D31 301 aa4.49□□□□□ -1.69
HMGB3P6-201ENST00000444896 FAM120BQ96EK7 910 aaKnown RBP4.49□□□□□ -1.69
HMGB3P6-201ENST00000444896 C3orf30Q96M34 536 aa4.49□□□□□ -1.69
HMGB3P6-201ENST00000444896 PCDH9Q9HC56 1237 aa4.49□□□□□ -1.69
HMGB3P6-201ENST00000444896 CWC15Q9P013 229 aaKnown RBP4.49□□□□□ -1.69
HMGB3P6-201ENST00000444896 OR14J1Q9UGF5 321 aa4.49□□□□□ -1.69
HMGB3P6-201ENST00000444896 VPS28Q9UK41 221 aa4.49□□□□□ -1.69
HMGB3P6-201ENST00000444896 PADI3Q9ULW8 664 aa4.49□□□□□ -1.69
HMGB3P6-201ENST00000444896 SESN1Q9Y6P5 492 aa4.49□□□□□ -1.69
HMGB3P6-201ENST00000444896 RAPGEF6Q8TEU7 1601 aa4.49□□□□□ -1.69
HMGB3P6-201ENST00000444896 SYNJ2O15056 1496 aa4.49□□□□□ -1.69
HMGB3P6-201ENST00000444896 ZNF608Q9ULD9 1512 aaPredicted RBP4.48□□□□□ -1.69
HMGB3P6-201ENST00000444896 M0QZ24 198 aa4.48□□□□□ -1.69
HMGB3P6-201ENST00000444896 DAB1O75553 588 aa4.48□□□□□ -1.69
HMGB3P6-201ENST00000444896 RFPL2O75678 378 aa4.48□□□□□ -1.69
HMGB3P6-201ENST00000444896 ZBTB11O95625 1053 aaPredicted RBP4.48□□□□□ -1.69
HMGB3P6-201ENST00000444896 PMS2P2O95744 297 aa4.48□□□□□ -1.69
HMGB3P6-201ENST00000444896 AFPP02771 609 aaKnown RBP4.48□□□□□ -1.69
HMGB3P6-201ENST00000444896 ICAM1P05362 532 aa4.48□□□□□ -1.69
HMGB3P6-201ENST00000444896 LINC00271P0C7V0 271 aa4.48□□□□□ -1.69
HMGB3P6-201ENST00000444896 HOXB6P17509 224 aaKnown RBP4.48□□□□□ -1.69
HMGB3P6-201ENST00000444896 UBA1P22314 1058 aaKnown RBP4.48□□□□□ -1.69
HMGB3P6-201ENST00000444896 CCKARP32238 428 aa4.48□□□□□ -1.69
HMGB3P6-201ENST00000444896 PRCPP42785 496 aa4.48□□□□□ -1.69
HMGB3P6-201ENST00000444896 MRPS34P82930 218 aaKnown RBP4.48□□□□□ -1.69
HMGB3P6-201ENST00000444896 ECT2LQ008S8 904 aa4.48□□□□□ -1.69
HMGB3P6-201ENST00000444896 CTF1Q16619 201 aa4.48□□□□□ -1.69
HMGB3P6-201ENST00000444896 DECR1Q16698 335 aa4.48□□□□□ -1.69
HMGB3P6-201ENST00000444896 PCGF3Q3KNV8 242 aa4.48□□□□□ -1.69
HMGB3P6-201ENST00000444896 ZSCAN23Q3MJ62 389 aa4.48□□□□□ -1.69
HMGB3P6-201ENST00000444896 RAB41Q5JT25 222 aa4.48□□□□□ -1.69
HMGB3P6-201ENST00000444896 NSUN5P2Q63ZY6 315 aa4.48□□□□□ -1.69
HMGB3P6-201ENST00000444896 FRG2Q64ET8 278 aa4.48□□□□□ -1.69
HMGB3P6-201ENST00000444896 LCN10Q6JVE6 187 aa4.48□□□□□ -1.69
HMGB3P6-201ENST00000444896 TMEM154Q6P9G4 183 aa4.48□□□□□ -1.69
HMGB3P6-201ENST00000444896 ARMC9Q7Z3E5 817 aa4.48□□□□□ -1.69
HMGB3P6-201ENST00000444896 SDCCAG8Q86SQ7 713 aaPredicted RBP4.48□□□□□ -1.69
HMGB3P6-201ENST00000444896 SATL1Q86VE3 508 aa4.48□□□□□ -1.69
HMGB3P6-201ENST00000444896 OR8K5Q8NH50 307 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms