RNA–Protein interactions for RNA: ENST00000444502.5

TOP3B-210, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 4,163 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-210ENST00000444502 LPOP22079 712 aaPredicted RBP10.55□□□□□ -0.72
TOP3B-210ENST00000444502 EEF1B2P24534 225 aaKnown RBP10.55□□□□□ -0.72
TOP3B-210ENST00000444502 PIK3R1P27986 724 aa10.55□□□□□ -0.72
TOP3B-210ENST00000444502 EEF1DP29692 281 aaKnown RBP10.55□□□□□ -0.72
TOP3B-210ENST00000444502 ACVRL1P37023 503 aa10.55□□□□□ -0.72
TOP3B-210ENST00000444502 GPR1P46091 355 aa10.55□□□□□ -0.72
TOP3B-210ENST00000444502 IDH3AP50213 366 aa10.55□□□□□ -0.72
TOP3B-210ENST00000444502 C1QTNF8P60827 252 aa10.55□□□□□ -0.72
TOP3B-210ENST00000444502 CAMK2GQ13555 558 aaPredicted RBP10.55□□□□□ -0.72
TOP3B-210ENST00000444502 TNFAIP8L3Q5GJ75 292 aa10.55□□□□□ -0.72
TOP3B-210ENST00000444502 TEDDM1Q5T9Z0 273 aa10.55□□□□□ -0.72
TOP3B-210ENST00000444502 TBC1D3GQ6DHY5 549 aa10.55□□□□□ -0.72
TOP3B-210ENST00000444502 TBC1D3CQ6IPX1 549 aa10.55□□□□□ -0.72
TOP3B-210ENST00000444502 TBC1D3Q8IZP1 549 aaPredicted RBP10.55□□□□□ -0.72
TOP3B-210ENST00000444502 FBXO39Q8N4B4 442 aa10.55□□□□□ -0.72
TOP3B-210ENST00000444502 COPS7BQ9H9Q2 264 aaPredicted RBP10.55□□□□□ -0.72
TOP3B-210ENST00000444502 PARVBQ9HBI1 364 aa10.55□□□□□ -0.72
TOP3B-210ENST00000444502 TMLHEQ9NVH6 421 aa10.55□□□□□ -0.72
TOP3B-210ENST00000444502 HEMK1Q9Y5R4 338 aaPredicted RBP10.55□□□□□ -0.72
TOP3B-210ENST00000444502 RAD54BQ9Y620 910 aa10.55□□□□□ -0.72
TOP3B-210ENST00000444502 MATN2O00339 956 aa10.55□□□□□ -0.72
TOP3B-210ENST00000444502 TEX28O15482 410 aa10.55□□□□□ -0.72
TOP3B-210ENST00000444502 CNTN5O94779 1100 aa10.55□□□□□ -0.72
TOP3B-210ENST00000444502 CA3P07451 260 aa10.55□□□□□ -0.72
TOP3B-210ENST00000444502 PLOD1Q02809 727 aaPredicted RBP10.55□□□□□ -0.72
TOP3B-210ENST00000444502 DLG1Q12959 904 aa10.55□□□□□ -0.72
TOP3B-210ENST00000444502 LRRTM3Q86VH5 581 aa10.55□□□□□ -0.72
TOP3B-210ENST00000444502 TRPC4APQ8TEL6 797 aa10.55□□□□□ -0.72
TOP3B-210ENST00000444502 RAD9AQ99638 391 aa10.55□□□□□ -0.72
TOP3B-210ENST00000444502 ZFP14Q9HCL3 533 aa10.55□□□□□ -0.72
TOP3B-210ENST00000444502 GID8Q9NWU2 228 aa10.55□□□□□ -0.72
TOP3B-210ENST00000444502 TBC1D14Q9P2M4 693 aa10.55□□□□□ -0.72
TOP3B-210ENST00000444502 CROTQ9UKG9 612 aa10.55□□□□□ -0.72
TOP3B-210ENST00000444502 NCKAP1Q9Y2A7 1128 aa10.55□□□□□ -0.72
TOP3B-210ENST00000444502 TCAF1Q9Y4C2 921 aa10.55□□□□□ -0.72
TOP3B-210ENST00000444502 PDLIM1O00151 329 aa10.55□□□□□ -0.72
TOP3B-210ENST00000444502 IFRD1O00458 451 aaPredicted RBP10.55□□□□□ -0.72
TOP3B-210ENST00000444502 PITPNM1O00562 1244 aa10.55□□□□□ -0.72
TOP3B-210ENST00000444502 AHSGP02765 367 aa10.55□□□□□ -0.72
TOP3B-210ENST00000444502 ELFN1P0C7U0 828 aa10.55□□□□□ -0.72
TOP3B-210ENST00000444502 PEX2P28328 305 aa10.55□□□□□ -0.72
TOP3B-210ENST00000444502 ENTPD1P49961 510 aa10.55□□□□□ -0.72
TOP3B-210ENST00000444502 YBEYP58557 167 aaPredicted RBP10.55□□□□□ -0.72
TOP3B-210ENST00000444502 KRT72Q14CN4 511 aa10.55□□□□□ -0.72
TOP3B-210ENST00000444502 SLC9B1Q4ZJI4 515 aa10.55□□□□□ -0.72
TOP3B-210ENST00000444502 PKDCCQ504Y2 493 aa10.55□□□□□ -0.72
TOP3B-210ENST00000444502 TPGS2Q68CL5 300 aa10.55□□□□□ -0.72
TOP3B-210ENST00000444502 CRTC3Q6UUV7 619 aa10.55□□□□□ -0.72
TOP3B-210ENST00000444502 CXorf40AQ8TE69 158 aa10.55□□□□□ -0.72
TOP3B-210ENST00000444502 SLC7A6OSQ96CW6 309 aaPredicted RBP10.55□□□□□ -0.72
TOP3B-210ENST00000444502 NPAS2Q99743 824 aa10.55□□□□□ -0.72
TOP3B-210ENST00000444502 COQ7Q99807 217 aa10.55□□□□□ -0.72
TOP3B-210ENST00000444502 WDR41Q9HAD4 459 aa10.55□□□□□ -0.72
TOP3B-210ENST00000444502 NMUR1Q9HB89 426 aa10.55□□□□□ -0.72
TOP3B-210ENST00000444502 ZDHHC4Q9NPG8 344 aa10.55□□□□□ -0.72
TOP3B-210ENST00000444502 MRPL40Q9NQ50 206 aaKnown RBP10.55□□□□□ -0.72
TOP3B-210ENST00000444502 ARL15Q9NXU5 204 aa10.55□□□□□ -0.72
TOP3B-210ENST00000444502 SATB2Q9UPW6 733 aa10.55□□□□□ -0.72
TOP3B-210ENST00000444502 MCM3APO60318 1980 aa10.55□□□□□ -0.72
TOP3B-210ENST00000444502 C9JVG2 144 aa10.55□□□□□ -0.72
TOP3B-210ENST00000444502 RNASEH2AO75792 299 aaKnown RBP10.55□□□□□ -0.72
TOP3B-210ENST00000444502 SLC25A14O95258 325 aaPredicted RBP10.55□□□□□ -0.72
TOP3B-210ENST00000444502 CYP2A6P11509 494 aaPredicted RBP10.55□□□□□ -0.72
TOP3B-210ENST00000444502 MAT2AP31153 395 aaKnown RBP10.55□□□□□ -0.72
TOP3B-210ENST00000444502 MC4RP32245 332 aa10.55□□□□□ -0.72
TOP3B-210ENST00000444502 SLC1A2P43004 574 aa10.55□□□□□ -0.72
TOP3B-210ENST00000444502 STT3AP46977 705 aa10.55□□□□□ -0.72
TOP3B-210ENST00000444502 RFX3P48380 749 aa10.55□□□□□ -0.72
TOP3B-210ENST00000444502 FOLH1Q04609 750 aa10.55□□□□□ -0.72
TOP3B-210ENST00000444502 RALGDSQ12967 914 aa10.55□□□□□ -0.72
TOP3B-210ENST00000444502 NR6A1Q15406 480 aa10.55□□□□□ -0.72
TOP3B-210ENST00000444502 TEAD2Q15562 447 aa10.55□□□□□ -0.72
TOP3B-210ENST00000444502 RPS27LQ71UM5 84 aaKnown RBP10.55□□□□□ -0.72
TOP3B-210ENST00000444502 SLC44A2Q8IWA5 706 aaPredicted RBP10.55□□□□□ -0.72
TOP3B-210ENST00000444502 HPS1Q92902 700 aa10.55□□□□□ -0.72
TOP3B-210ENST00000444502 MRPL57Q9BQC6 102 aaKnown RBP10.55□□□□□ -0.72
TOP3B-210ENST00000444502 HAUS8Q9BT25 410 aa10.55□□□□□ -0.72
TOP3B-210ENST00000444502 PLGRKTQ9HBL7 147 aa10.55□□□□□ -0.72
TOP3B-210ENST00000444502 VTI1BQ9UEU0 232 aa10.55□□□□□ -0.72
TOP3B-210ENST00000444502 PPM1HQ9ULR3 514 aa10.55□□□□□ -0.72
TOP3B-210ENST00000444502 H3BSA7 217 aa10.54□□□□□ -0.72
TOP3B-210ENST00000444502 DCLK1O15075 740 aa10.54□□□□□ -0.72
TOP3B-210ENST00000444502 TM7SF2O76062 418 aa10.54□□□□□ -0.72
TOP3B-210ENST00000444502 PCNAP12004 261 aa10.54□□□□□ -0.72
TOP3B-210ENST00000444502 PORP16435 677 aaPredicted RBP10.54□□□□□ -0.72
TOP3B-210ENST00000444502 ME2P23368 584 aa10.54□□□□□ -0.72
TOP3B-210ENST00000444502 PARP15Q460N3 678 aa10.54□□□□□ -0.72
TOP3B-210ENST00000444502 SPDYE7PQ495Y7 208 aa10.54□□□□□ -0.72
TOP3B-210ENST00000444502 PERM1Q5SV97 790 aa10.54□□□□□ -0.72
TOP3B-210ENST00000444502 ADGRF1Q5T601 910 aa10.54□□□□□ -0.72
TOP3B-210ENST00000444502 LRRC49Q8IUZ0 686 aa10.54□□□□□ -0.72
TOP3B-210ENST00000444502 DCBLD1Q8N8Z6 715 aa10.54□□□□□ -0.72
TOP3B-210ENST00000444502 ZMIZ2Q8NF64 920 aa10.54□□□□□ -0.72
TOP3B-210ENST00000444502 HEXDCQ8WVB3 486 aa10.54□□□□□ -0.72
TOP3B-210ENST00000444502 ELMO1Q92556 727 aa10.54□□□□□ -0.72
TOP3B-210ENST00000444502 KLK6Q92876 244 aa10.54□□□□□ -0.72
TOP3B-210ENST00000444502 CLIP3Q96DZ5 547 aa10.54□□□□□ -0.72
TOP3B-210ENST00000444502 WDR83Q9BRX9 315 aaKnown RBP10.54□□□□□ -0.72
TOP3B-210ENST00000444502 ACAT2Q9BWD1 397 aa10.54□□□□□ -0.72
TOP3B-210ENST00000444502 SEMA6AQ9H2E6 1030 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms