RNA–Protein interactions for RNA: ENST00000444440.1

SF3A1-203, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 777 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-203ENST00000444440 ZNF574Q6ZN55 896 aaPredicted RBP10.79□□□□□ -0.68
SF3A1-203ENST00000444440 ZNF761Q86XN6 746 aaPredicted RBP10.79□□□□□ -0.68
SF3A1-203ENST00000444440 SLITRK4Q8IW52 837 aa10.79□□□□□ -0.68
SF3A1-203ENST00000444440 NDUFAF2Q8N183 169 aa10.79□□□□□ -0.68
SF3A1-203ENST00000444440 ZNF567Q8N184 647 aa10.79□□□□□ -0.68
SF3A1-203ENST00000444440 LIN37Q96GY3 246 aaPredicted RBP10.79□□□□□ -0.68
SF3A1-203ENST00000444440 OXNAD1Q96HP4 312 aaPredicted RBP10.79□□□□□ -0.68
SF3A1-203ENST00000444440 CALR3Q96L12 384 aaKnown RBP10.79□□□□□ -0.68
SF3A1-203ENST00000444440 OR2M4Q96R27 311 aa10.79□□□□□ -0.68
SF3A1-203ENST00000444440 HEMGNQ9BXL5 484 aa10.79□□□□□ -0.68
SF3A1-203ENST00000444440 GSDMCQ9BYG8 508 aa10.79□□□□□ -0.68
SF3A1-203ENST00000444440 SEMA6CQ9H3T2 930 aa10.79□□□□□ -0.68
SF3A1-203ENST00000444440 RDH14Q9HBH5 336 aa10.79□□□□□ -0.68
SF3A1-203ENST00000444440 EPB41L5Q9HCM4 733 aa10.79□□□□□ -0.68
SF3A1-203ENST00000444440 TRIM10Q9UDY6 481 aa10.79□□□□□ -0.68
SF3A1-203ENST00000444440 TMPRSS11EQ9UL52 423 aa10.79□□□□□ -0.68
SF3A1-203ENST00000444440 EPN1Q9Y6I3 576 aaPredicted RBP10.79□□□□□ -0.68
SF3A1-203ENST00000444440 TRBV23OR9-2A0A075B6M9 112 aa10.78□□□□□ -0.68
SF3A1-203ENST00000444440 CCDC187A0A096LP49 1063 aa10.78□□□□□ -0.68
SF3A1-203ENST00000444440 NUDT21O43809 227 aaKnown RBP10.78□□□□□ -0.68
SF3A1-203ENST00000444440 TNFSF15O95150 251 aa10.78□□□□□ -0.68
SF3A1-203ENST00000444440 ASMTLO95671 621 aa10.78□□□□□ -0.68
SF3A1-203ENST00000444440 PNLIPP16233 465 aa10.78□□□□□ -0.68
SF3A1-203ENST00000444440 BPIP17213 487 aa10.78□□□□□ -0.68
SF3A1-203ENST00000444440 ITIH1P19827 911 aa10.78□□□□□ -0.68
SF3A1-203ENST00000444440 CA4P22748 312 aa10.78□□□□□ -0.68
SF3A1-203ENST00000444440 CCKBRP32239 447 aa10.78□□□□□ -0.68
SF3A1-203ENST00000444440 CSF2RBP32927 897 aa10.78□□□□□ -0.68
SF3A1-203ENST00000444440 INHBCP55103 352 aa10.78□□□□□ -0.68
SF3A1-203ENST00000444440 PCBP4P57723 403 aaKnown RBP10.78□□□□□ -0.68
SF3A1-203ENST00000444440 ERVPABLB-1P60509 514 aa10.78□□□□□ -0.68
SF3A1-203ENST00000444440 CFHR1Q03591 330 aa10.78□□□□□ -0.68
SF3A1-203ENST00000444440 ZFP36L1Q07352 338 aaKnown RBP10.78□□□□□ -0.68
SF3A1-203ENST00000444440 TFDP2Q14188 446 aa10.78□□□□□ -0.68
SF3A1-203ENST00000444440 NR1D2Q14995 579 aa10.78□□□□□ -0.68
SF3A1-203ENST00000444440 NKAIN2Q5VXU1 208 aa10.78□□□□□ -0.68
SF3A1-203ENST00000444440 TMC3Q7Z5M5 1100 aa10.78□□□□□ -0.68
SF3A1-203ENST00000444440 DAAM2Q86T65 1068 aa10.78□□□□□ -0.68
SF3A1-203ENST00000444440 TXLNBQ8N3L3 684 aa10.78□□□□□ -0.68
SF3A1-203ENST00000444440 ZNF248Q8NDW4 579 aa10.78□□□□□ -0.68
SF3A1-203ENST00000444440 OR6C4Q8NGE1 309 aa10.78□□□□□ -0.68
SF3A1-203ENST00000444440 EXD1Q8NHP7 514 aa10.78□□□□□ -0.68
SF3A1-203ENST00000444440 WDR36Q8NI36 951 aaKnown RBP10.78□□□□□ -0.68
SF3A1-203ENST00000444440 WDR48Q8TAF3 677 aa10.78□□□□□ -0.68
SF3A1-203ENST00000444440 TFB1MQ8WVM0 346 aaKnown RBP10.78□□□□□ -0.68
SF3A1-203ENST00000444440 MRGPRX2Q96LB1 330 aa10.78□□□□□ -0.68
SF3A1-203ENST00000444440 QKIQ96PU8 341 aaKnown RBP eCLIP10.78□□□□□ -0.68
SF3A1-203ENST00000444440 FAM118BQ9BPY3 351 aa10.78□□□□□ -0.68
SF3A1-203ENST00000444440 NUDT22Q9BRQ3 303 aa10.78□□□□□ -0.68
SF3A1-203ENST00000444440 CDH19Q9H159 772 aa10.78□□□□□ -0.68
SF3A1-203ENST00000444440 FAM83DQ9H4H8 585 aa10.78□□□□□ -0.68
SF3A1-203ENST00000444440 ZFYVE1Q9HBF4 777 aa10.78□□□□□ -0.68
SF3A1-203ENST00000444440 CPNE5Q9HCH3 593 aa10.78□□□□□ -0.68
SF3A1-203ENST00000444440 BPIFA1Q9NP55 256 aa10.78□□□□□ -0.68
SF3A1-203ENST00000444440 HAUS2Q9NVX0 235 aa10.78□□□□□ -0.68
SF3A1-203ENST00000444440 PKD2L2Q9NZM6 624 aa10.78□□□□□ -0.68
SF3A1-203ENST00000444440 ATXN10Q9UBB4 475 aa10.78□□□□□ -0.68
SF3A1-203ENST00000444440 DNPEPQ9ULA0 475 aa10.78□□□□□ -0.68
SF3A1-203ENST00000444440 PCDHGA8Q9Y5G5 932 aa10.78□□□□□ -0.68
SF3A1-203ENST00000444440 ADGRG1Q9Y653 693 aa10.78□□□□□ -0.68
SF3A1-203ENST00000444440 KALRNO60229 2985 aa10.78□□□□□ -0.68
SF3A1-203ENST00000444440 AHCTF1Q8WYP5 2266 aa10.78□□□□□ -0.68
SF3A1-203ENST00000444440 BOD1L1Q8NFC6 3051 aa10.78□□□□□ -0.68
SF3A1-203ENST00000444440 GRID2IPA4D2P6 1211 aa10.77□□□□□ -0.69
SF3A1-203ENST00000444440 A6NCN8 305 aa10.77□□□□□ -0.69
SF3A1-203ENST00000444440 RRP8O43159 456 aaKnown RBP10.77□□□□□ -0.69
SF3A1-203ENST00000444440 GPR39O43194 453 aa10.77□□□□□ -0.69
SF3A1-203ENST00000444440 MTX2O75431 263 aa10.77□□□□□ -0.69
SF3A1-203ENST00000444440 ZRANB2O95218 330 aaKnown RBP eCLIP10.77□□□□□ -0.69
SF3A1-203ENST00000444440 NDST3O95803 873 aa10.77□□□□□ -0.69
SF3A1-203ENST00000444440 ZNF8P17098 575 aaPredicted RBP10.77□□□□□ -0.69
SF3A1-203ENST00000444440 CD1CP29017 333 aa10.77□□□□□ -0.69
SF3A1-203ENST00000444440 CTNNA1P35221 906 aaKnown RBP10.77□□□□□ -0.69
SF3A1-203ENST00000444440 UGT1A5P35504 534 aa10.77□□□□□ -0.69
SF3A1-203ENST00000444440 NR2C2P49116 596 aa10.77□□□□□ -0.69
SF3A1-203ENST00000444440 WNT3AP56704 352 aa10.77□□□□□ -0.69
SF3A1-203ENST00000444440 SRSF6Q13247 344 aaKnown RBP10.77□□□□□ -0.69
SF3A1-203ENST00000444440 OLIG2Q13516 323 aa10.77□□□□□ -0.69
SF3A1-203ENST00000444440 C16orf72Q14CZ0 275 aa10.77□□□□□ -0.69
SF3A1-203ENST00000444440 SLC14A2Q15849 920 aa10.77□□□□□ -0.69
SF3A1-203ENST00000444440 PPP2R5EQ16537 467 aa10.77□□□□□ -0.69
SF3A1-203ENST00000444440 SIRPB2Q5JXA9 342 aa10.77□□□□□ -0.69
SF3A1-203ENST00000444440 PCSK4Q6UW60 755 aa10.77□□□□□ -0.69
SF3A1-203ENST00000444440 LRRC69Q6ZNQ3 347 aa10.77□□□□□ -0.69
SF3A1-203ENST00000444440 MICALCLQ6ZW33 695 aa10.77□□□□□ -0.69
SF3A1-203ENST00000444440 BBS12Q6ZW61 710 aa10.77□□□□□ -0.69
SF3A1-203ENST00000444440 RAB11FIP2Q7L804 512 aa10.77□□□□□ -0.69
SF3A1-203ENST00000444440 CHST15Q7LFX5 561 aaPredicted RBP10.77□□□□□ -0.69
SF3A1-203ENST00000444440 CLEC14AQ86T13 490 aa10.77□□□□□ -0.69
SF3A1-203ENST00000444440 GALNT13Q8IUC8 556 aa10.77□□□□□ -0.69
SF3A1-203ENST00000444440 CCDC50Q8IVM0 306 aa10.77□□□□□ -0.69
SF3A1-203ENST00000444440 RAVER1Q8IY67 606 aaKnown RBP10.77□□□□□ -0.69
SF3A1-203ENST00000444440 RCOR2Q8IZ40 523 aa10.77□□□□□ -0.69
SF3A1-203ENST00000444440 LSMEM2Q8N112 164 aa10.77□□□□□ -0.69
SF3A1-203ENST00000444440 TTC30BQ8N4P2 665 aa10.77□□□□□ -0.69
SF3A1-203ENST00000444440 LRRC57Q8N9N7 239 aa10.77□□□□□ -0.69
SF3A1-203ENST00000444440 KIAA1524Q8TCG1 905 aa10.77□□□□□ -0.69
SF3A1-203ENST00000444440 SLC37A2Q8TED4 501 aa10.77□□□□□ -0.69
SF3A1-203ENST00000444440 ALG3Q92685 438 aa10.77□□□□□ -0.69
SF3A1-203ENST00000444440 P3H4Q92791 437 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms