RNA–Protein interactions for RNA: ENST00000443711.2

USP40-206, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 2 BASIC

Gene USP40, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-206ENST00000443711 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.68■□□□□ 0.1
USP40-206ENST00000443711 PLXNB3Q9ULL4 1909 aa15.67■□□□□ 0.1
USP40-206ENST00000443711 POM121BA6NF01 834 aa15.67■□□□□ 0.1
USP40-206ENST00000443711 OR51F1A6NGY5 319 aa15.67■□□□□ 0.1
USP40-206ENST00000443711 A6NNZ2 444 aa15.67■□□□□ 0.1
USP40-206ENST00000443711 FADS2P1A8MWK0 482 aa15.67■□□□□ 0.1
USP40-206ENST00000443711 PRR5-ARHGAP8B1AHC4 643 aa15.67■□□□□ 0.1
USP40-206ENST00000443711 CD3EAPO15446 510 aaKnown RBP15.67■□□□□ 0.1
USP40-206ENST00000443711 CTIFO43310 598 aaKnown RBP15.67■□□□□ 0.1
USP40-206ENST00000443711 SOD1P00441 154 aa15.67■□□□□ 0.1
USP40-206ENST00000443711 HOXC4P09017 264 aaPredicted RBP15.67■□□□□ 0.1
USP40-206ENST00000443711 GNSP15586 552 aa15.67■□□□□ 0.1
USP40-206ENST00000443711 ARNTP27540 789 aa15.67■□□□□ 0.1
USP40-206ENST00000443711 CD38P28907 300 aa15.67■□□□□ 0.1
USP40-206ENST00000443711 SSTR1P30872 391 aa15.67■□□□□ 0.1
USP40-206ENST00000443711 YPEL5P62699 121 aa15.67■□□□□ 0.1
USP40-206ENST00000443711 LYPLAL1Q5VWZ2 237 aa15.67■□□□□ 0.1
USP40-206ENST00000443711 NEPROQ6NW34 567 aa15.67■□□□□ 0.1
USP40-206ENST00000443711 KYAT3Q6YP21 454 aaKnown RBP15.67■□□□□ 0.1
USP40-206ENST00000443711 C3orf62Q6ZUJ4 267 aa15.67■□□□□ 0.1
USP40-206ENST00000443711 TRMT10CQ7L0Y3 403 aaKnown RBP15.67■□□□□ 0.1
USP40-206ENST00000443711 TAS2R42Q7RTR8 314 aa15.67■□□□□ 0.1
USP40-206ENST00000443711 PTAR1Q7Z6K3 402 aaPredicted RBP15.67■□□□□ 0.1
USP40-206ENST00000443711 ABI3BPQ7Z7G0 1075 aa15.67■□□□□ 0.1
USP40-206ENST00000443711 IQCHQ86VS3 1027 aa15.67■□□□□ 0.1
USP40-206ENST00000443711 LMNTD2Q8IXW0 634 aa15.67■□□□□ 0.1
USP40-206ENST00000443711 MFSD2AQ8NA29 543 aa15.67■□□□□ 0.1
USP40-206ENST00000443711 GABPB2Q8TAK5 448 aaPredicted RBP15.67■□□□□ 0.1
USP40-206ENST00000443711 CALML6Q8TD86 181 aa15.67■□□□□ 0.1
USP40-206ENST00000443711 BTN2A2Q8WVV5 523 aa15.67■□□□□ 0.1
USP40-206ENST00000443711 GLYATL1Q969I3 302 aa15.67■□□□□ 0.1
USP40-206ENST00000443711 ULK4Q96C45 1275 aa15.67■□□□□ 0.1
USP40-206ENST00000443711 KLHDC7BQ96G42 594 aa15.67■□□□□ 0.1
USP40-206ENST00000443711 HIC2Q96JB3 615 aa15.67■□□□□ 0.1
USP40-206ENST00000443711 SLC6A18Q96N87 628 aa15.67■□□□□ 0.1
USP40-206ENST00000443711 TTC1Q99614 292 aa15.67■□□□□ 0.1
USP40-206ENST00000443711 TEX101Q9BY14 249 aa15.67■□□□□ 0.1
USP40-206ENST00000443711 CDC42EP4Q9H3Q1 356 aaKnown RBP15.67■□□□□ 0.1
USP40-206ENST00000443711 FAM96AQ9H5X1 160 aa15.67■□□□□ 0.1
USP40-206ENST00000443711 WDR26Q9H7D7 661 aa15.67■□□□□ 0.1
USP40-206ENST00000443711 VPS37BQ9H9H4 285 aa15.67■□□□□ 0.1
USP40-206ENST00000443711 PLAC1Q9HBJ0 212 aa15.67■□□□□ 0.1
USP40-206ENST00000443711 LRRC4CQ9HCJ2 640 aa15.67■□□□□ 0.1
USP40-206ENST00000443711 TM9SF3Q9HD45 589 aa15.67■□□□□ 0.1
USP40-206ENST00000443711 PHPT1Q9NRX4 125 aaPredicted RBP15.67■□□□□ 0.1
USP40-206ENST00000443711 CATSPERZQ9NTU4 200 aa15.67■□□□□ 0.1
USP40-206ENST00000443711 NINJ2Q9NZG7 142 aa15.67■□□□□ 0.1
USP40-206ENST00000443711 SUSD2Q9UGT4 822 aa15.67■□□□□ 0.1
USP40-206ENST00000443711 CRLS1Q9UJA2 301 aa15.67■□□□□ 0.1
USP40-206ENST00000443711 TRBV5-4A0A0C4DH59 114 aa15.66■□□□□ 0.1
USP40-206ENST00000443711 A0A1B0GTW7 788 aa15.66■□□□□ 0.1
USP40-206ENST00000443711 AGAP14A8MT82 685 aa15.66■□□□□ 0.1
USP40-206ENST00000443711 H0Y8X5 98 aa15.66■□□□□ 0.1
USP40-206ENST00000443711 CACNB4O00305 520 aaPredicted RBP15.66■□□□□ 0.1
USP40-206ENST00000443711 INPP4BO15327 924 aa15.66■□□□□ 0.1
USP40-206ENST00000443711 BCAT2O15382 392 aaPredicted RBP15.66■□□□□ 0.1
USP40-206ENST00000443711 SLC25A14O95258 325 aaPredicted RBP15.66■□□□□ 0.1
USP40-206ENST00000443711 FOXN2P32314 431 aa15.66■□□□□ 0.1
USP40-206ENST00000443711 PPARGP37231 505 aaPredicted RBP15.66■□□□□ 0.1
USP40-206ENST00000443711 RABIFP47224 123 aa15.66■□□□□ 0.1
USP40-206ENST00000443711 PMS2P54278 862 aa15.66■□□□□ 0.1
USP40-206ENST00000443711 GPX6P59796 221 aa15.66■□□□□ 0.1
USP40-206ENST00000443711 PFN3P60673 137 aa15.66■□□□□ 0.1
USP40-206ENST00000443711 OVGP1Q12889 678 aa15.66■□□□□ 0.1
USP40-206ENST00000443711 AARS2Q5JTZ9 985 aaKnown RBP15.66■□□□□ 0.1
USP40-206ENST00000443711 MRNIPQ6NTE8 343 aa15.66■□□□□ 0.1
USP40-206ENST00000443711 EMBQ6PCB8 327 aa15.66■□□□□ 0.1
USP40-206ENST00000443711 CERS6Q6ZMG9 384 aa15.66■□□□□ 0.1
USP40-206ENST00000443711 CAPN12Q6ZSI9 719 aa15.66■□□□□ 0.1
USP40-206ENST00000443711 Q6ZSR6 202 aa15.66■□□□□ 0.1
USP40-206ENST00000443711 CYS1Q717R9 158 aa15.66■□□□□ 0.1
USP40-206ENST00000443711 RABEPKQ7Z6M1 372 aa15.66■□□□□ 0.1
USP40-206ENST00000443711 SDCCAG8Q86SQ7 713 aaPredicted RBP15.66■□□□□ 0.1
USP40-206ENST00000443711 KCNMB4Q86W47 210 aa15.66■□□□□ 0.1
USP40-206ENST00000443711 HEATR4Q86WZ0 1026 aa15.66■□□□□ 0.1
USP40-206ENST00000443711 DCP2Q8IU60 420 aaKnown RBP15.66■□□□□ 0.1
USP40-206ENST00000443711 SYT12Q8IV01 421 aa15.66■□□□□ 0.1
USP40-206ENST00000443711 GPR150Q8NGU9 434 aa15.66■□□□□ 0.1
USP40-206ENST00000443711 GDAP1Q8TB36 358 aa15.66■□□□□ 0.1
USP40-206ENST00000443711 PIGKQ92643 395 aa15.66■□□□□ 0.1
USP40-206ENST00000443711 ATOH1Q92858 354 aaPredicted RBP15.66■□□□□ 0.1
USP40-206ENST00000443711 SKA1Q96BD8 255 aa15.66■□□□□ 0.1
USP40-206ENST00000443711 CERS2Q96G23 380 aa15.66■□□□□ 0.1
USP40-206ENST00000443711 FAM167BQ9BTA0 163 aa15.66■□□□□ 0.1
USP40-206ENST00000443711 SEMA4AQ9H3S1 761 aa15.66■□□□□ 0.1
USP40-206ENST00000443711 SMOXQ9NWM0 555 aa15.66■□□□□ 0.1
USP40-206ENST00000443711 PILRBQ9UKJ0 227 aa15.66■□□□□ 0.1
USP40-206ENST00000443711 CNOT6Q9ULM6 557 aaKnown RBP15.66■□□□□ 0.1
USP40-206ENST00000443711 PI4KAP42356 2102 aa15.65■□□□□ 0.1
USP40-206ENST00000443711 A0A1W2PR77 199 aa15.65■□□□□ 0.1
USP40-206ENST00000443711 MAGEC1O60732 1142 aa15.65■□□□□ 0.1
USP40-206ENST00000443711 KELP23276 732 aa15.65■□□□□ 0.1
USP40-206ENST00000443711 PHBP35232 272 aa15.65■□□□□ 0.1
USP40-206ENST00000443711 HOXD12P35452 270 aa15.65■□□□□ 0.1
USP40-206ENST00000443711 AFF3P51826 1226 aaKnown RBP15.65■□□□□ 0.1
USP40-206ENST00000443711 THOP1P52888 689 aa15.65■□□□□ 0.1
USP40-206ENST00000443711 KIAA1024LP59773 190 aa15.65■□□□□ 0.1
USP40-206ENST00000443711 CDK3Q00526 305 aa15.65■□□□□ 0.1
USP40-206ENST00000443711 MGAT5Q09328 741 aa15.65■□□□□ 0.1
USP40-206ENST00000443711 TEAD4Q15561 434 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms