RNA–Protein interactions for RNA: ENST00000443197.5

CALD1-210, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 4,173 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-210ENST00000443197 EPB42P16452 691 aa10.54□□□□□ -0.72
CALD1-210ENST00000443197 ITPKAP23677 461 aa10.54□□□□□ -0.72
CALD1-210ENST00000443197 KRT6CP48668 564 aa10.54□□□□□ -0.72
CALD1-210ENST00000443197 AP1S1P61966 158 aa10.54□□□□□ -0.72
CALD1-210ENST00000443197 PLOD1Q02809 727 aaPredicted RBP10.54□□□□□ -0.72
CALD1-210ENST00000443197 RALGDSQ12967 914 aa10.54□□□□□ -0.72
CALD1-210ENST00000443197 FKBP9P1Q75LS8 142 aa10.54□□□□□ -0.72
CALD1-210ENST00000443197 ADAMTSL2Q86TH1 951 aa10.54□□□□□ -0.72
CALD1-210ENST00000443197 ST13P4Q8IZP2 240 aaPredicted RBP10.54□□□□□ -0.72
CALD1-210ENST00000443197 APCDD1Q8J025 514 aa10.54□□□□□ -0.72
CALD1-210ENST00000443197 C2orf73Q8N5S3 287 aaPredicted RBP10.54□□□□□ -0.72
CALD1-210ENST00000443197 CLHC1Q8NHS4 586 aa10.54□□□□□ -0.72
CALD1-210ENST00000443197 RNF217Q8TC41 542 aa10.54□□□□□ -0.72
CALD1-210ENST00000443197 CNBD2Q96M20 576 aa10.54□□□□□ -0.72
CALD1-210ENST00000443197 ACAT2Q9BWD1 397 aa10.54□□□□□ -0.72
CALD1-210ENST00000443197 RUBCNLQ9H714 662 aa10.54□□□□□ -0.72
CALD1-210ENST00000443197 NOL11Q9H8H0 719 aaKnown RBP10.54□□□□□ -0.72
CALD1-210ENST00000443197 ARHGEF3Q9NR81 526 aa10.54□□□□□ -0.72
CALD1-210ENST00000443197 DUS2Q9NX74 493 aaKnown RBP10.54□□□□□ -0.72
CALD1-210ENST00000443197 GIMAP2Q9UG22 337 aa10.54□□□□□ -0.72
CALD1-210ENST00000443197 EGFL7Q9UHF1 273 aa10.54□□□□□ -0.72
CALD1-210ENST00000443197 ZNF510Q9Y2H8 683 aa10.54□□□□□ -0.72
CALD1-210ENST00000443197 TMEM189-UBE2V1I3L0A0 370 aa10.53□□□□□ -0.72
CALD1-210ENST00000443197 RNASEH1O60930 286 aaKnown RBP10.53□□□□□ -0.72
CALD1-210ENST00000443197 ATP6V1B1P15313 513 aa10.53□□□□□ -0.72
CALD1-210ENST00000443197 VCLP18206 1134 aa10.53□□□□□ -0.72
CALD1-210ENST00000443197 RPL38P63173 70 aaKnown RBP10.53□□□□□ -0.72
CALD1-210ENST00000443197 CLCQ05315 142 aa10.53□□□□□ -0.72
CALD1-210ENST00000443197 FAM26DQ5JW98 314 aa10.53□□□□□ -0.72
CALD1-210ENST00000443197 GRAMD4Q6IC98 578 aa10.53□□□□□ -0.72
CALD1-210ENST00000443197 CRTC3Q6UUV7 619 aa10.53□□□□□ -0.72
CALD1-210ENST00000443197 MYLIPQ8WY64 445 aa10.53□□□□□ -0.72
CALD1-210ENST00000443197 ACDQ96AP0 544 aa10.53□□□□□ -0.72
CALD1-210ENST00000443197 ZNF599Q96NL3 588 aa10.53□□□□□ -0.72
CALD1-210ENST00000443197 SCAMP1O15126 338 aa10.53□□□□□ -0.72
CALD1-210ENST00000443197 GPR39O43194 453 aa10.53□□□□□ -0.72
CALD1-210ENST00000443197 ULK1O75385 1050 aa10.53□□□□□ -0.72
CALD1-210ENST00000443197 RASSF9O75901 435 aa10.53□□□□□ -0.72
CALD1-210ENST00000443197 PABPC1P11940 636 aaKnown RBP10.53□□□□□ -0.72
CALD1-210ENST00000443197 CYP2A7P20853 494 aa10.53□□□□□ -0.72
CALD1-210ENST00000443197 SPAM1P38567 509 aa10.53□□□□□ -0.72
CALD1-210ENST00000443197 GPR1P46091 355 aa10.53□□□□□ -0.72
CALD1-210ENST00000443197 PSME3P61289 254 aa10.53□□□□□ -0.72
CALD1-210ENST00000443197 DSG1Q02413 1049 aa10.53□□□□□ -0.72
CALD1-210ENST00000443197 IRF8Q02556 426 aa10.53□□□□□ -0.72
CALD1-210ENST00000443197 CACNG1Q06432 222 aa10.53□□□□□ -0.72
CALD1-210ENST00000443197 TIGD2Q4W5G0 525 aa10.53□□□□□ -0.72
CALD1-210ENST00000443197 STEAP4Q687X5 459 aa10.53□□□□□ -0.72
CALD1-210ENST00000443197 CGB2Q6NT52 195 aa10.53□□□□□ -0.72
CALD1-210ENST00000443197 TREML1Q86YW5 311 aa10.53□□□□□ -0.72
CALD1-210ENST00000443197 C19orf60Q96EN9 201 aa10.53□□□□□ -0.72
CALD1-210ENST00000443197 VPS50Q96JG6 964 aa10.53□□□□□ -0.72
CALD1-210ENST00000443197 OLFM1Q99784 485 aa10.53□□□□□ -0.72
CALD1-210ENST00000443197 C11orf84Q9BUA3 381 aaPredicted RBP10.53□□□□□ -0.72
CALD1-210ENST00000443197 POLG2Q9UHN1 485 aa10.53□□□□□ -0.72
CALD1-210ENST00000443197 ATXN2Q99700 1313 aaKnown RBP10.53□□□□□ -0.72
CALD1-210ENST00000443197 PDZK1P1A8MUH7 402 aa10.53□□□□□ -0.72
CALD1-210ENST00000443197 TRAFD1O14545 582 aaPredicted RBP10.53□□□□□ -0.72
CALD1-210ENST00000443197 OR4F21O95013 312 aa10.53□□□□□ -0.72
CALD1-210ENST00000443197 ECT2LQ008S8 904 aa10.53□□□□□ -0.72
CALD1-210ENST00000443197 CLEC4FQ8N1N0 589 aa10.53□□□□□ -0.72
CALD1-210ENST00000443197 TXNDC5Q8NBS9 432 aaKnown RBP10.53□□□□□ -0.72
CALD1-210ENST00000443197 C2CD4AQ8NCU7 369 aaPredicted RBP10.53□□□□□ -0.72
CALD1-210ENST00000443197 EEF1AKMT1Q8WVE0 214 aa10.53□□□□□ -0.72
CALD1-210ENST00000443197 TWIST2Q8WVJ9 160 aa10.53□□□□□ -0.72
CALD1-210ENST00000443197 FAM162AQ96A26 154 aa10.53□□□□□ -0.72
CALD1-210ENST00000443197 ING2Q9H160 280 aa10.53□□□□□ -0.72
CALD1-210ENST00000443197 MRGBPQ9NV56 204 aa10.53□□□□□ -0.72
CALD1-210ENST00000443197 GALPQ9UBC7 116 aa10.53□□□□□ -0.72
CALD1-210ENST00000443197 ASB3Q9Y575 518 aa10.53□□□□□ -0.72
CALD1-210ENST00000443197 BACE2Q9Y5Z0 518 aa10.53□□□□□ -0.72
CALD1-210ENST00000443197 TRIP11Q15643 1979 aa10.52□□□□□ -0.72
CALD1-210ENST00000443197 KANSL1LA0AUZ9 987 aa10.52□□□□□ -0.72
CALD1-210ENST00000443197 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.52□□□□□ -0.72
CALD1-210ENST00000443197 FKBP6O75344 327 aa10.52□□□□□ -0.72
CALD1-210ENST00000443197 POP4O95707 220 aaKnown RBP10.52□□□□□ -0.72
CALD1-210ENST00000443197 ABCB1P08183 1280 aaPredicted RBP10.52□□□□□ -0.72
CALD1-210ENST00000443197 TYRP14679 529 aa10.52□□□□□ -0.72
CALD1-210ENST00000443197 ETV4P43268 484 aa10.52□□□□□ -0.72
CALD1-210ENST00000443197 CDKN1CP49918 316 aaPredicted RBP10.52□□□□□ -0.72
CALD1-210ENST00000443197 CCNHP51946 323 aaPredicted RBP10.52□□□□□ -0.72
CALD1-210ENST00000443197 NRG1Q02297 640 aaPredicted RBP10.52□□□□□ -0.72
CALD1-210ENST00000443197 LRRC74AQ0VAA2 488 aa10.52□□□□□ -0.72
CALD1-210ENST00000443197 CHRNA6Q15825 494 aa10.52□□□□□ -0.72
CALD1-210ENST00000443197 VPS26BQ4G0F5 336 aa10.52□□□□□ -0.72
CALD1-210ENST00000443197 PREPLQ4J6C6 727 aaPredicted RBP10.52□□□□□ -0.72
CALD1-210ENST00000443197 PITRM1Q5JRX3 1037 aa10.52□□□□□ -0.72
CALD1-210ENST00000443197 SLC44A2Q8IWA5 706 aaPredicted RBP10.52□□□□□ -0.72
CALD1-210ENST00000443197 OR2AP1Q8NGE2 309 aa10.52□□□□□ -0.72
CALD1-210ENST00000443197 OR6Y1Q8NGX8 325 aa10.52□□□□□ -0.72
CALD1-210ENST00000443197 RP9Q8TA86 221 aaKnown RBP10.52□□□□□ -0.72
CALD1-210ENST00000443197 GDPD5Q8WTR4 605 aa10.52□□□□□ -0.72
CALD1-210ENST00000443197 CYGBQ8WWM9 190 aa10.52□□□□□ -0.72
CALD1-210ENST00000443197 TOP1MTQ969P6 601 aa10.52□□□□□ -0.72
CALD1-210ENST00000443197 PYCR2Q96C36 320 aa10.52□□□□□ -0.72
CALD1-210ENST00000443197 CCDC138Q96M89 665 aa10.52□□□□□ -0.72
CALD1-210ENST00000443197 MYCBPQ99417 103 aaPredicted RBP10.52□□□□□ -0.72
CALD1-210ENST00000443197 TBC1D14Q9P2M4 693 aa10.52□□□□□ -0.72
CALD1-210ENST00000443197 ORC6Q9Y5N6 252 aa10.52□□□□□ -0.72
CALD1-210ENST00000443197 CARNS1A5YM72 827 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms