RNA–Protein interactions for RNA: ENST00000442830.5

PTPRE-203, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 5

Gene PTPRE, Length 779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-203ENST00000442830 ADGRE3Q9BY15 652 aa13.7□□□□□ -0.22
PTPRE-203ENST00000442830 FBXO8Q9NRD0 319 aa13.7□□□□□ -0.22
PTPRE-203ENST00000442830 B3GALT1Q9Y5Z6 326 aa13.7□□□□□ -0.22
PTPRE-203ENST00000442830 PTPN13Q12923 2485 aa13.69□□□□□ -0.22
PTPRE-203ENST00000442830 EFCAB7A8K855 629 aa13.69□□□□□ -0.22
PTPRE-203ENST00000442830 RAD1O60671 282 aa13.69□□□□□ -0.22
PTPRE-203ENST00000442830 CYP1A2P05177 515 aa13.69□□□□□ -0.22
PTPRE-203ENST00000442830 PDHA1P08559 390 aa13.69□□□□□ -0.22
PTPRE-203ENST00000442830 KRT7P08729 469 aa13.69□□□□□ -0.22
PTPRE-203ENST00000442830 CSF2RBP32927 897 aa13.69□□□□□ -0.22
PTPRE-203ENST00000442830 SSR1P43307 286 aaKnown RBP13.69□□□□□ -0.22
PTPRE-203ENST00000442830 CLCNKAP51800 687 aa13.69□□□□□ -0.22
PTPRE-203ENST00000442830 MC2RQ01718 297 aa13.69□□□□□ -0.22
PTPRE-203ENST00000442830 ABHD18Q0P651 414 aa13.69□□□□□ -0.22
PTPRE-203ENST00000442830 SRSF6Q13247 344 aaKnown RBP13.69□□□□□ -0.22
PTPRE-203ENST00000442830 MAP7Q14244 749 aa13.69□□□□□ -0.22
PTPRE-203ENST00000442830 ANKRD20A8PQ5CZ79 823 aa13.69□□□□□ -0.22
PTPRE-203ENST00000442830 E4F1Q66K89 784 aaPredicted RBP13.69□□□□□ -0.22
PTPRE-203ENST00000442830 PDPK2PQ6A1A2 396 aa13.69□□□□□ -0.22
PTPRE-203ENST00000442830 LYSMD3Q7Z3D4 306 aa13.69□□□□□ -0.22
PTPRE-203ENST00000442830 PLXDC1Q8IUK5 500 aa13.69□□□□□ -0.22
PTPRE-203ENST00000442830 PHYKPLQ8IUZ5 450 aa13.69□□□□□ -0.22
PTPRE-203ENST00000442830 NLGN4XQ8N0W4 816 aa13.69□□□□□ -0.22
PTPRE-203ENST00000442830 NLGN4YQ8NFZ3 816 aaPredicted RBP13.69□□□□□ -0.22
PTPRE-203ENST00000442830 PATE1Q8WXA2 126 aa13.69□□□□□ -0.22
PTPRE-203ENST00000442830 SRPK1Q96SB4 655 aaKnown RBP13.69□□□□□ -0.22
PTPRE-203ENST00000442830 RIOK2Q9BVS4 552 aaKnown RBP13.69□□□□□ -0.22
PTPRE-203ENST00000442830 THAP2Q9H0W7 228 aa13.69□□□□□ -0.22
PTPRE-203ENST00000442830 CARD9Q9H257 536 aa13.69□□□□□ -0.22
PTPRE-203ENST00000442830 UCK1Q9HA47 277 aa13.69□□□□□ -0.22
PTPRE-203ENST00000442830 PCDH9Q9HC56 1237 aa13.69□□□□□ -0.22
PTPRE-203ENST00000442830 RBM22Q9NW64 420 aaKnown RBP eCLIP13.69□□□□□ -0.22
PTPRE-203ENST00000442830 UVRAGQ9P2Y5 699 aa13.69□□□□□ -0.22
PTPRE-203ENST00000442830 ZNHIT2Q9UHR6 403 aa13.69□□□□□ -0.22
PTPRE-203ENST00000442830 CD84Q9UIB8 345 aa13.69□□□□□ -0.22
PTPRE-203ENST00000442830 TMEM98Q9Y2Y6 226 aa13.69□□□□□ -0.22
PTPRE-203ENST00000442830 TTLL3Q9Y4R7 772 aa13.69□□□□□ -0.22
PTPRE-203ENST00000442830 NAV2Q8IVL1 2488 aa13.69□□□□□ -0.22
PTPRE-203ENST00000442830 UBR5O95071 2799 aaPredicted RBP13.68□□□□□ -0.22
PTPRE-203ENST00000442830 C1orf232A0A0U1RR37 186 aa13.68□□□□□ -0.22
PTPRE-203ENST00000442830 LILRA5A6NI73 299 aa13.68□□□□□ -0.22
PTPRE-203ENST00000442830 AGRPO00253 132 aa13.68□□□□□ -0.22
PTPRE-203ENST00000442830 MFSD11O43934 449 aa13.68□□□□□ -0.22
PTPRE-203ENST00000442830 DNAJC6O75061 913 aa13.68□□□□□ -0.22
PTPRE-203ENST00000442830 MAP3K6O95382 1288 aa13.68□□□□□ -0.22
PTPRE-203ENST00000442830 SKILP12757 684 aa13.68□□□□□ -0.22
PTPRE-203ENST00000442830 F3P13726 295 aa13.68□□□□□ -0.22
PTPRE-203ENST00000442830 SPINT3P49223 89 aa13.68□□□□□ -0.22
PTPRE-203ENST00000442830 ZBED6P86452 979 aa13.68□□□□□ -0.22
PTPRE-203ENST00000442830 KCNAB2Q13303 367 aa13.68□□□□□ -0.22
PTPRE-203ENST00000442830 DPYSL3Q14195 570 aa13.68□□□□□ -0.22
PTPRE-203ENST00000442830 NR1I3Q14994 352 aa13.68□□□□□ -0.22
PTPRE-203ENST00000442830 HENMT1Q5T8I9 393 aaKnown RBP13.68□□□□□ -0.22
PTPRE-203ENST00000442830 NKAIN2Q5VXU1 208 aa13.68□□□□□ -0.22
PTPRE-203ENST00000442830 NCBP2-AS2Q69YL0 99 aa13.68□□□□□ -0.22
PTPRE-203ENST00000442830 MARK2Q7KZI7 788 aaKnown RBP13.68□□□□□ -0.22
PTPRE-203ENST00000442830 ARHGAP22Q7Z5H3 698 aa13.68□□□□□ -0.22
PTPRE-203ENST00000442830 KCTD6Q8NC69 237 aa13.68□□□□□ -0.22
PTPRE-203ENST00000442830 ZNF564Q8TBZ8 553 aaPredicted RBP13.68□□□□□ -0.22
PTPRE-203ENST00000442830 HTR3CQ8WXA8 447 aa13.68□□□□□ -0.22
PTPRE-203ENST00000442830 SCAMP4Q969E2 229 aa13.68□□□□□ -0.22
PTPRE-203ENST00000442830 HDAC11Q96DB2 347 aa13.68□□□□□ -0.22
PTPRE-203ENST00000442830 ANP32EQ9BTT0 268 aa13.68□□□□□ -0.22
PTPRE-203ENST00000442830 MLPHQ9BV36 600 aaPredicted RBP13.68□□□□□ -0.22
PTPRE-203ENST00000442830 XPO4Q9C0E2 1151 aaKnown RBP13.68□□□□□ -0.22
PTPRE-203ENST00000442830 FAM83DQ9H4H8 585 aa13.68□□□□□ -0.22
PTPRE-203ENST00000442830 GPN2Q9H9Y4 310 aaPredicted RBP13.68□□□□□ -0.22
PTPRE-203ENST00000442830 ANAPC2Q9UJX6 822 aa13.68□□□□□ -0.22
PTPRE-203ENST00000442830 PILRAQ9UKJ1 303 aa13.68□□□□□ -0.22
PTPRE-203ENST00000442830 CHKBQ9Y259 395 aa13.68□□□□□ -0.22
PTPRE-203ENST00000442830 ST14Q9Y5Y6 855 aa13.68□□□□□ -0.22
PTPRE-203ENST00000442830 ZNF487B1APH4 448 aa13.67□□□□□ -0.22
PTPRE-203ENST00000442830 INPP4BO15327 924 aa13.67□□□□□ -0.22
PTPRE-203ENST00000442830 TOX3O15405 576 aaPredicted RBP13.67□□□□□ -0.22
PTPRE-203ENST00000442830 MTA2O94776 668 aa13.67□□□□□ -0.22
PTPRE-203ENST00000442830 ANKRD34CP0C6C1 535 aa13.67□□□□□ -0.22
PTPRE-203ENST00000442830 LIFP15018 202 aa13.67□□□□□ -0.22
PTPRE-203ENST00000442830 TCF4P15884 667 aa13.67□□□□□ -0.22
PTPRE-203ENST00000442830 POLE2P56282 527 aa13.67□□□□□ -0.22
PTPRE-203ENST00000442830 DCDC1P59894 354 aa13.67□□□□□ -0.22
PTPRE-203ENST00000442830 DSC2Q02487 901 aa13.67□□□□□ -0.22
PTPRE-203ENST00000442830 HGSNATQ68CP4 663 aa13.67□□□□□ -0.22
PTPRE-203ENST00000442830 ALKBH5Q6P6C2 394 aaKnown RBP13.67□□□□□ -0.22
PTPRE-203ENST00000442830 IYDQ6PHW0 289 aa13.67□□□□□ -0.22
PTPRE-203ENST00000442830 CHST15Q7LFX5 561 aaPredicted RBP13.67□□□□□ -0.22
PTPRE-203ENST00000442830 VSIG1Q86XK7 387 aa13.67□□□□□ -0.22
PTPRE-203ENST00000442830 ESX1Q8N693 406 aa13.67□□□□□ -0.22
PTPRE-203ENST00000442830 BMPERQ8N8U9 685 aa13.67□□□□□ -0.22
PTPRE-203ENST00000442830 LPCAT1Q8NF37 534 aa13.67□□□□□ -0.22
PTPRE-203ENST00000442830 RTP4Q96DX8 246 aa13.67□□□□□ -0.22
PTPRE-203ENST00000442830 ZSCAN5AQ9BUG6 496 aa13.67□□□□□ -0.22
PTPRE-203ENST00000442830 NFKBIL1Q9UBC1 381 aaPredicted RBP13.67□□□□□ -0.22
PTPRE-203ENST00000442830 TMEM184BQ9Y519 407 aaPredicted RBP13.67□□□□□ -0.22
PTPRE-203ENST00000442830 MN1Q10571 1320 aaPredicted RBP13.66□□□□□ -0.22
PTPRE-203ENST00000442830 HECTD1Q9ULT8 2610 aa13.66□□□□□ -0.22
PTPRE-203ENST00000442830 ZNF106Q9H2Y7 1883 aaKnown RBP13.66□□□□□ -0.22
PTPRE-203ENST00000442830 ANKRD66B4E2M5 251 aa13.66□□□□□ -0.22
PTPRE-203ENST00000442830 POLR1CO15160 346 aaPredicted RBP13.66□□□□□ -0.22
PTPRE-203ENST00000442830 NUAK1O60285 661 aa13.66□□□□□ -0.22
PTPRE-203ENST00000442830 CLDN7O95471 211 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms