RNA–Protein interactions for RNA: ENST00000440118.1

SHROOM1-204, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-204ENST00000440118 MARCKSL1P49006 195 aa19.71■□□□□ 0.75
SHROOM1-204ENST00000440118 HENMT1Q5T8I9 393 aaKnown RBP19.71■□□□□ 0.75
SHROOM1-204ENST00000440118 SPATA22Q8NHS9 363 aa19.71■□□□□ 0.75
SHROOM1-204ENST00000440118 CCDC97Q96F63 343 aaPredicted RBP19.71■□□□□ 0.75
SHROOM1-204ENST00000440118 SLC46A1Q96NT5 459 aa19.71■□□□□ 0.75
SHROOM1-204ENST00000440118 FERMT1Q9BQL6 677 aa19.71■□□□□ 0.75
SHROOM1-204ENST00000440118 UBP1Q9NZI7 540 aa19.71■□□□□ 0.75
SHROOM1-204ENST00000440118 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.71■□□□□ 0.75
SHROOM1-204ENST00000440118 AKAP7Q9P0M2 348 aaPredicted RBP19.71■□□□□ 0.75
SHROOM1-204ENST00000440118 VPS18Q9P253 973 aa19.71■□□□□ 0.75
SHROOM1-204ENST00000440118 SCN8AQ9UQD0 1980 aa19.7■□□□□ 0.74
SHROOM1-204ENST00000440118 hCG_1818297A0A087WSY0 165 aa19.7■□□□□ 0.74
SHROOM1-204ENST00000440118 PMS2P1A4D2B8 440 aa19.7■□□□□ 0.74
SHROOM1-204ENST00000440118 F5H423 210 aaPredicted RBP19.7■□□□□ 0.74
SHROOM1-204ENST00000440118 KLK10O43240 276 aa19.7■□□□□ 0.74
SHROOM1-204ENST00000440118 NDST3O95803 873 aa19.7■□□□□ 0.74
SHROOM1-204ENST00000440118 ITGA2BP08514 1039 aa19.7■□□□□ 0.74
SHROOM1-204ENST00000440118 CCKBRP32239 447 aa19.7■□□□□ 0.74
SHROOM1-204ENST00000440118 CXADRP78310 365 aa19.7■□□□□ 0.74
SHROOM1-204ENST00000440118 TLE3Q04726 772 aa19.7■□□□□ 0.74
SHROOM1-204ENST00000440118 SLC14A2Q15849 920 aa19.7■□□□□ 0.74
SHROOM1-204ENST00000440118 PYCR3Q53H96 274 aa19.7■□□□□ 0.74
SHROOM1-204ENST00000440118 IGF2-ASQ6U949 168 aa19.7■□□□□ 0.74
SHROOM1-204ENST00000440118 CHST15Q7LFX5 561 aaPredicted RBP19.7■□□□□ 0.74
SHROOM1-204ENST00000440118 KIAA1328Q86T90 577 aa19.7■□□□□ 0.74
SHROOM1-204ENST00000440118 PATE1Q8WXA2 126 aa19.7■□□□□ 0.74
SHROOM1-204ENST00000440118 COX14Q96I36 57 aa19.7■□□□□ 0.74
SHROOM1-204ENST00000440118 TEKT5Q96M29 485 aa19.7■□□□□ 0.74
SHROOM1-204ENST00000440118 TRIB3Q96RU7 358 aa19.7■□□□□ 0.74
SHROOM1-204ENST00000440118 SRPK1Q96SB4 655 aaKnown RBP19.7■□□□□ 0.74
SHROOM1-204ENST00000440118 STN1Q9H668 368 aaKnown RBP19.7■□□□□ 0.74
SHROOM1-204ENST00000440118 PISDQ9UG56 409 aa19.7■□□□□ 0.74
SHROOM1-204ENST00000440118 PLEKHM1Q9Y4G2 1056 aa19.7■□□□□ 0.74
SHROOM1-204ENST00000440118 LOXL2Q9Y4K0 774 aa19.7■□□□□ 0.74
SHROOM1-204ENST00000440118 EPN1Q9Y6I3 576 aaPredicted RBP19.7■□□□□ 0.74
SHROOM1-204ENST00000440118 ATRXP46100 2492 aa19.7■□□□□ 0.74
SHROOM1-204ENST00000440118 A0A1W2PNU3 283 aaPredicted RBP19.69■□□□□ 0.74
SHROOM1-204ENST00000440118 FADS2P1A8MWK0 482 aa19.69■□□□□ 0.74
SHROOM1-204ENST00000440118 PTMAP06454 111 aaKnown RBP19.69■□□□□ 0.74
SHROOM1-204ENST00000440118 NFKB1P19838 968 aa19.69■□□□□ 0.74
SHROOM1-204ENST00000440118 CTNNA2P26232 953 aa19.69■□□□□ 0.74
SHROOM1-204ENST00000440118 UCNP55089 124 aa19.69■□□□□ 0.74
SHROOM1-204ENST00000440118 TMPRSS3P57727 454 aa19.69■□□□□ 0.74
SHROOM1-204ENST00000440118 OR1D5P58170 312 aa19.69■□□□□ 0.74
SHROOM1-204ENST00000440118 TAZQ16635 292 aa19.69■□□□□ 0.74
SHROOM1-204ENST00000440118 PIM3Q86V86 326 aa19.69■□□□□ 0.74
SHROOM1-204ENST00000440118 KRT35Q92764 455 aa19.69■□□□□ 0.74
SHROOM1-204ENST00000440118 SCARF2Q96GP6 870 aaPredicted RBP19.69■□□□□ 0.74
SHROOM1-204ENST00000440118 CALR3Q96L12 384 aaKnown RBP19.69■□□□□ 0.74
SHROOM1-204ENST00000440118 ZSCAN5AQ9BUG6 496 aa19.69■□□□□ 0.74
SHROOM1-204ENST00000440118 HEMGNQ9BXL5 484 aa19.69■□□□□ 0.74
SHROOM1-204ENST00000440118 RDH14Q9HBH5 336 aa19.69■□□□□ 0.74
SHROOM1-204ENST00000440118 MAGEE1Q9HCI5 957 aa19.69■□□□□ 0.74
SHROOM1-204ENST00000440118 FAM153AQ9UHL3 310 aa19.69■□□□□ 0.74
SHROOM1-204ENST00000440118 PRKAB1Q9Y478 270 aa19.69■□□□□ 0.74
SHROOM1-204ENST00000440118 OAS3Q9Y6K5 1087 aaKnown RBP19.69■□□□□ 0.74
SHROOM1-204ENST00000440118 H7C0C1 242 aa19.68■□□□□ 0.74
SHROOM1-204ENST00000440118 SLC25A14O95258 325 aaPredicted RBP19.68■□□□□ 0.74
SHROOM1-204ENST00000440118 CPNE6O95741 557 aa19.68■□□□□ 0.74
SHROOM1-204ENST00000440118 ACP5P13686 325 aa19.68■□□□□ 0.74
SHROOM1-204ENST00000440118 HGFP14210 728 aa19.68■□□□□ 0.74
SHROOM1-204ENST00000440118 CETN2P41208 172 aa19.68■□□□□ 0.74
SHROOM1-204ENST00000440118 ATP5OP48047 213 aa19.68■□□□□ 0.74
SHROOM1-204ENST00000440118 DCDC1P59894 354 aa19.68■□□□□ 0.74
SHROOM1-204ENST00000440118 PPP2R5EQ16537 467 aa19.68■□□□□ 0.74
SHROOM1-204ENST00000440118 PID1Q7Z2X4 250 aa19.68■□□□□ 0.74
SHROOM1-204ENST00000440118 PHYKPLQ8IUZ5 450 aa19.68■□□□□ 0.74
SHROOM1-204ENST00000440118 NAGSQ8N159 534 aa19.68■□□□□ 0.74
SHROOM1-204ENST00000440118 HTR3CQ8WXA8 447 aa19.68■□□□□ 0.74
SHROOM1-204ENST00000440118 QKIQ96PU8 341 aaKnown RBP eCLIP19.68■□□□□ 0.743e-9■■□□□ 12
SHROOM1-204ENST00000440118 VAT1Q99536 393 aa19.68■□□□□ 0.74
SHROOM1-204ENST00000440118 CMKLR1Q99788 373 aa19.68■□□□□ 0.74
SHROOM1-204ENST00000440118 FSD1LQ9BXM9 530 aa19.68■□□□□ 0.74
SHROOM1-204ENST00000440118 RMI1Q9H9A7 625 aa19.68■□□□□ 0.74
SHROOM1-204ENST00000440118 KCNK4Q9NYG8 393 aa19.68■□□□□ 0.74
SHROOM1-204ENST00000440118 RSPH14Q9UHP6 348 aa19.68■□□□□ 0.74
SHROOM1-204ENST00000440118 KCNK6Q9Y257 313 aa19.68■□□□□ 0.74
SHROOM1-204ENST00000440118 HACD1B0YJ81 288 aa19.67■□□□□ 0.74
SHROOM1-204ENST00000440118 SNX2O60749 519 aa19.67■□□□□ 0.74
SHROOM1-204ENST00000440118 SLC2A4P14672 509 aa19.67■□□□□ 0.74
SHROOM1-204ENST00000440118 UGT1A5P35504 534 aa19.67■□□□□ 0.74
SHROOM1-204ENST00000440118 USP53Q70EK8 1073 aa19.67■□□□□ 0.74
SHROOM1-204ENST00000440118 GPR155Q7Z3F1 870 aa19.67■□□□□ 0.74
SHROOM1-204ENST00000440118 TXLNBQ8N3L3 684 aa19.67■□□□□ 0.74
SHROOM1-204ENST00000440118 TRAM1L1Q8N609 369 aa19.67■□□□□ 0.74
SHROOM1-204ENST00000440118 IPMKQ8NFU5 416 aa19.67■□□□□ 0.74
SHROOM1-204ENST00000440118 TMEM159Q96B96 161 aa19.67■□□□□ 0.74
SHROOM1-204ENST00000440118 AHCYL2Q96HN2 611 aaKnown RBP19.67■□□□□ 0.74
SHROOM1-204ENST00000440118 SLC38A3Q99624 504 aa19.67■□□□□ 0.74
SHROOM1-204ENST00000440118 DPH1Q9BZG8 443 aa19.67■□□□□ 0.74
SHROOM1-204ENST00000440118 OR2AG1Q9H205 316 aa19.67■□□□□ 0.74
SHROOM1-204ENST00000440118 OSGEPL1Q9H4B0 414 aa19.67■□□□□ 0.74
SHROOM1-204ENST00000440118 ARFGAP3Q9NP61 516 aa19.67■□□□□ 0.74
SHROOM1-204ENST00000440118 ST14Q9Y5Y6 855 aa19.67■□□□□ 0.74
SHROOM1-204ENST00000440118 TRBV23OR9-2A0A075B6M9 112 aa19.66■□□□□ 0.74
SHROOM1-204ENST00000440118 APOC4-APOC2K7ER74 178 aa19.66■□□□□ 0.74
SHROOM1-204ENST00000440118 STK10O94804 968 aaKnown RBP19.66■□□□□ 0.74
SHROOM1-204ENST00000440118 APOC2P02655 101 aa19.66■□□□□ 0.74
SHROOM1-204ENST00000440118 CTNNA1P35221 906 aaKnown RBP19.66■□□□□ 0.74
SHROOM1-204ENST00000440118 GPR3P46089 330 aa19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms