RNA–Protein interactions for RNA: ENST00000439962.1

EDEM3-203, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 1 (best)

Gene EDEM3, Length 2,872 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-203ENST00000439962 TBC1D3EA0A087X179 549 aa4.75□□□□□ -1.65
EDEM3-203ENST00000439962 TBC1D3KA0A087X1G2 549 aa4.75□□□□□ -1.65
EDEM3-203ENST00000439962 A0A0G2JND7 137 aa4.75□□□□□ -1.65
EDEM3-203ENST00000439962 DYTNA2CJ06 578 aa4.75□□□□□ -1.65
EDEM3-203ENST00000439962 TBC1D3FA6NER0 549 aaPredicted RBP4.75□□□□□ -1.65
EDEM3-203ENST00000439962 MEI4A8MW99 385 aa4.75□□□□□ -1.65
EDEM3-203ENST00000439962 CXorf49A8MYA2 514 aaPredicted RBP4.75□□□□□ -1.65
EDEM3-203ENST00000439962 TBC1D3LB9A6J9 549 aa4.75□□□□□ -1.65
EDEM3-203ENST00000439962 NEMP1O14524 444 aa4.75□□□□□ -1.65
EDEM3-203ENST00000439962 SLC31A1O15431 190 aa4.75□□□□□ -1.65
EDEM3-203ENST00000439962 CCNT2O60583 730 aaKnown RBP4.75□□□□□ -1.65
EDEM3-203ENST00000439962 PSMG1O95456 288 aa4.75□□□□□ -1.65
EDEM3-203ENST00000439962 TBC1D3HP0C7X1 549 aa4.75□□□□□ -1.65
EDEM3-203ENST00000439962 PIM1P11309 404 aaPredicted RBP4.75□□□□□ -1.65
EDEM3-203ENST00000439962 FGF3P11487 239 aaPredicted RBP4.75□□□□□ -1.65
EDEM3-203ENST00000439962 SPINK2P20155 84 aa4.75□□□□□ -1.65
EDEM3-203ENST00000439962 NNMTP40261 264 aa4.75□□□□□ -1.65
EDEM3-203ENST00000439962 RPS9P46781 194 aaKnown RBP4.75□□□□□ -1.65
EDEM3-203ENST00000439962 CSNK1EP49674 416 aaKnown RBP4.75□□□□□ -1.65
EDEM3-203ENST00000439962 TPI1P60174 286 aa4.75□□□□□ -1.65
EDEM3-203ENST00000439962 ECT2LQ008S8 904 aa4.75□□□□□ -1.65
EDEM3-203ENST00000439962 GALNT1Q10472 559 aaPredicted RBP4.75□□□□□ -1.65
EDEM3-203ENST00000439962 CDH17Q12864 832 aa4.75□□□□□ -1.65
EDEM3-203ENST00000439962 PLEKHG6Q3KR16 790 aa4.75□□□□□ -1.65
EDEM3-203ENST00000439962 FBXO43Q4G163 708 aa4.75□□□□□ -1.65
EDEM3-203ENST00000439962 FASTKD1Q53R41 847 aaKnown RBP4.75□□□□□ -1.65
EDEM3-203ENST00000439962 ZNF542PQ5EBM4 170 aa4.75□□□□□ -1.65
EDEM3-203ENST00000439962 TRIM61Q5EBN2 209 aa4.75□□□□□ -1.65
EDEM3-203ENST00000439962 RABGAP1LQ5R372 815 aa4.75□□□□□ -1.65
EDEM3-203ENST00000439962 TBC1D3GQ6DHY5 549 aa4.75□□□□□ -1.65
EDEM3-203ENST00000439962 TBC1D3CQ6IPX1 549 aa4.75□□□□□ -1.65
EDEM3-203ENST00000439962 KLHDC10Q6PID8 442 aa4.75□□□□□ -1.65
EDEM3-203ENST00000439962 SYT13Q7L8C5 426 aa4.75□□□□□ -1.65
EDEM3-203ENST00000439962 TBC1D3Q8IZP1 549 aaPredicted RBP4.75□□□□□ -1.65
EDEM3-203ENST00000439962 ZNF567Q8N184 647 aa4.75□□□□□ -1.65
EDEM3-203ENST00000439962 N4BP2L2Q92802 583 aaPredicted RBP4.75□□□□□ -1.65
EDEM3-203ENST00000439962 ACDQ96AP0 544 aa4.75□□□□□ -1.65
EDEM3-203ENST00000439962 CCDC126Q96EE4 140 aa4.75□□□□□ -1.65
EDEM3-203ENST00000439962 FAR2Q96K12 515 aa4.75□□□□□ -1.65
EDEM3-203ENST00000439962 C1orf74Q96LT6 269 aa4.75□□□□□ -1.65
EDEM3-203ENST00000439962 FCRL5Q96RD9 977 aa4.75□□□□□ -1.65
EDEM3-203ENST00000439962 DENND2DQ9H6A0 471 aaPredicted RBP4.75□□□□□ -1.65
EDEM3-203ENST00000439962 CATSPERBQ9H7T0 1116 aa4.75□□□□□ -1.65
EDEM3-203ENST00000439962 PARD6AQ9NPB6 346 aa4.75□□□□□ -1.65
EDEM3-203ENST00000439962 ARL8BQ9NVJ2 186 aa4.75□□□□□ -1.65
EDEM3-203ENST00000439962 FBXL12Q9NXK8 326 aa4.75□□□□□ -1.65
EDEM3-203ENST00000439962 TAS2R1Q9NYW7 299 aa4.75□□□□□ -1.65
EDEM3-203ENST00000439962 IL1RAPL1Q9NZN1 696 aa4.75□□□□□ -1.65
EDEM3-203ENST00000439962 ZFATQ9P243 1243 aa4.75□□□□□ -1.65
EDEM3-203ENST00000439962 COPG2Q9UBF2 871 aa4.75□□□□□ -1.65
EDEM3-203ENST00000439962 SARDHQ9UL12 918 aa4.75□□□□□ -1.65
EDEM3-203ENST00000439962 STK38LQ9Y2H1 464 aa4.75□□□□□ -1.65
EDEM3-203ENST00000439962 A0A087X1B8 175 aa4.75□□□□□ -1.65
EDEM3-203ENST00000439962 FOXO6A8MYZ6 492 aa4.75□□□□□ -1.65
EDEM3-203ENST00000439962 PALM2-AKAP2B1ALY0 433 aaPredicted RBP4.75□□□□□ -1.65
EDEM3-203ENST00000439962 HOXC11O43248 304 aaPredicted RBP4.75□□□□□ -1.65
EDEM3-203ENST00000439962 PEX1O43933 1283 aa4.75□□□□□ -1.65
EDEM3-203ENST00000439962 PCDH8O95206 1070 aa4.75□□□□□ -1.65
EDEM3-203ENST00000439962 PAPSS2O95340 614 aaPredicted RBP4.75□□□□□ -1.65
EDEM3-203ENST00000439962 PAPLNO95428 1278 aa4.75□□□□□ -1.65
EDEM3-203ENST00000439962 GSRP00390 522 aa4.75□□□□□ -1.65
EDEM3-203ENST00000439962 ALDOAP04075 364 aaKnown RBP4.75□□□□□ -1.65
EDEM3-203ENST00000439962 SLC2A3P11169 496 aa4.75□□□□□ -1.65
EDEM3-203ENST00000439962 PAMP19021 973 aa4.75□□□□□ -1.65
EDEM3-203ENST00000439962 AMPD1P23109 780 aa4.75□□□□□ -1.65
EDEM3-203ENST00000439962 PTPN3P26045 913 aa4.75□□□□□ -1.65
EDEM3-203ENST00000439962 SLC1A6P48664 564 aa4.75□□□□□ -1.65
EDEM3-203ENST00000439962 TPMTP51580 245 aa4.75□□□□□ -1.65
EDEM3-203ENST00000439962 GEMP55040 296 aa4.75□□□□□ -1.65
EDEM3-203ENST00000439962 DNAJB13P59910 316 aa4.75□□□□□ -1.65
EDEM3-203ENST00000439962 ACTR3P61158 418 aa4.75□□□□□ -1.65
EDEM3-203ENST00000439962 ABCE1P61221 599 aaKnown RBP4.75□□□□□ -1.65
EDEM3-203ENST00000439962 MAXP61244 160 aa4.75□□□□□ -1.65
EDEM3-203ENST00000439962 AP2B1P63010 937 aa4.75□□□□□ -1.65
EDEM3-203ENST00000439962 ITKQ08881 620 aa4.75□□□□□ -1.65
EDEM3-203ENST00000439962 TUBB3Q13509 450 aa4.75□□□□□ -1.65
EDEM3-203ENST00000439962 RFTN1Q14699 578 aaPredicted RBP4.75□□□□□ -1.65
EDEM3-203ENST00000439962 KPNB1Q14974 876 aaKnown RBP4.75□□□□□ -1.65
EDEM3-203ENST00000439962 PCLAFQ15004 111 aa4.75□□□□□ -1.65
EDEM3-203ENST00000439962 PTPRRQ15256 657 aa4.75□□□□□ -1.65
EDEM3-203ENST00000439962 PTPRNQ16849 979 aa4.75□□□□□ -1.65
EDEM3-203ENST00000439962 EOGTQ5NDL2 527 aa4.75□□□□□ -1.65
EDEM3-203ENST00000439962 HP1BP3Q5SSJ5 553 aaPredicted RBP4.75□□□□□ -1.65
EDEM3-203ENST00000439962 TEDDM1Q5T9Z0 273 aa4.75□□□□□ -1.65
EDEM3-203ENST00000439962 AFMIDQ63HM1 303 aa4.75□□□□□ -1.65
EDEM3-203ENST00000439962 ARHGAP36Q6ZRI8 547 aa4.75□□□□□ -1.65
EDEM3-203ENST00000439962 CAPN12Q6ZSI9 719 aa4.75□□□□□ -1.65
EDEM3-203ENST00000439962 RASSF3Q86WH2 238 aa4.75□□□□□ -1.65
EDEM3-203ENST00000439962 MYLK4Q86YV6 388 aaPredicted RBP4.75□□□□□ -1.65
EDEM3-203ENST00000439962 SCUBE1Q8IWY4 988 aa4.75□□□□□ -1.65
EDEM3-203ENST00000439962 KIF2BQ8N4N8 673 aa4.75□□□□□ -1.65
EDEM3-203ENST00000439962 CPSF7Q8N684 471 aaKnown RBP4.75□□□□□ -1.65
EDEM3-203ENST00000439962 PNPLA1Q8N8W4 532 aa4.75□□□□□ -1.65
EDEM3-203ENST00000439962 CHST14Q8NCH0 376 aa4.75□□□□□ -1.65
EDEM3-203ENST00000439962 ARMC2Q8NEN0 867 aa4.75□□□□□ -1.65
EDEM3-203ENST00000439962 OTUB2Q96DC9 234 aa4.75□□□□□ -1.65
EDEM3-203ENST00000439962 SLC39A13Q96H72 371 aa4.75□□□□□ -1.65
EDEM3-203ENST00000439962 TEKT5Q96M29 485 aa4.75□□□□□ -1.65
EDEM3-203ENST00000439962 TSNARE1Q96NA8 513 aa4.75□□□□□ -1.65
EDEM3-203ENST00000439962 GPR22Q99680 433 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 97.2 ms