RNA–Protein interactions for RNA: ENST00000439669.5

CPNE1-217, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 784 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-217ENST00000439669 VPS18Q9P253 973 aa23.84■■□□□ 1.41
CPNE1-217ENST00000439669 NFKBIL1Q9UBC1 381 aaPredicted RBP23.84■■□□□ 1.41
CPNE1-217ENST00000439669 ASXL3Q9C0F0 2248 aa23.84■■□□□ 1.41
CPNE1-217ENST00000439669 MYLKQ15746 1914 aa23.84■■□□□ 1.41
CPNE1-217ENST00000439669 AKAP13Q12802 2813 aa23.83■■□□□ 1.41
CPNE1-217ENST00000439669 NOBOXO60393 691 aa23.83■■□□□ 1.41
CPNE1-217ENST00000439669 CSO75390 466 aaKnown RBP23.83■■□□□ 1.41
CPNE1-217ENST00000439669 ACTR1BP42025 376 aa23.83■■□□□ 1.41
CPNE1-217ENST00000439669 ACTR1AP61163 376 aa23.83■■□□□ 1.41
CPNE1-217ENST00000439669 C14orf28Q4W4Y0 310 aa23.83■■□□□ 1.41
CPNE1-217ENST00000439669 PYCR3Q53H96 274 aa23.83■■□□□ 1.41
CPNE1-217ENST00000439669 OGFOD3Q6PK18 319 aa23.83■■□□□ 1.41
CPNE1-217ENST00000439669 GLT6D1Q7Z4J2 308 aa23.83■■□□□ 1.41
CPNE1-217ENST00000439669 TRAM1L1Q8N609 369 aa23.83■■□□□ 1.41
CPNE1-217ENST00000439669 OR6C4Q8NGE1 309 aa23.83■■□□□ 1.41
CPNE1-217ENST00000439669 ZDHHC1Q8WTX9 485 aa23.83■■□□□ 1.41
CPNE1-217ENST00000439669 GORASP1Q9BQQ3 440 aa23.83■■□□□ 1.41
CPNE1-217ENST00000439669 SPATS2LQ9NUQ6 558 aaKnown RBP23.83■■□□□ 1.41
CPNE1-217ENST00000439669 ZNHIT2Q9UHR6 403 aa23.83■■□□□ 1.41
CPNE1-217ENST00000439669 R3HDM2Q9Y2K5 976 aaKnown RBP23.83■■□□□ 1.41
CPNE1-217ENST00000439669 AAR2Q9Y312 384 aaKnown RBP23.83■■□□□ 1.41
CPNE1-217ENST00000439669 PLEKHM1Q9Y4G2 1056 aa23.83■■□□□ 1.41
CPNE1-217ENST00000439669 AK5Q9Y6K8 562 aa23.83■■□□□ 1.41
CPNE1-217ENST00000439669 TCRBV7S2A1N4TA0A589 114 aa23.82■■□□□ 1.4
CPNE1-217ENST00000439669 AGTP01019 485 aa23.82■■□□□ 1.4
CPNE1-217ENST00000439669 CAPNS1P04632 268 aa23.82■■□□□ 1.4
CPNE1-217ENST00000439669 RBM44Q6ZP01 1051 aaKnown RBP23.82■■□□□ 1.4
CPNE1-217ENST00000439669 PROSER1Q86XN7 944 aa23.82■■□□□ 1.4
CPNE1-217ENST00000439669 FAM71DQ8N9W8 422 aa23.82■■□□□ 1.4
CPNE1-217ENST00000439669 APOL2Q9BQE5 337 aa23.82■■□□□ 1.4
CPNE1-217ENST00000439669 ARFGAP3Q9NP61 516 aa23.82■■□□□ 1.4
CPNE1-217ENST00000439669 RABGEF1Q9UJ41 708 aa23.82■■□□□ 1.4
CPNE1-217ENST00000439669 PRKAB1Q9Y478 270 aa23.82■■□□□ 1.4
CPNE1-217ENST00000439669 PCDHB1Q9Y5F3 818 aa23.82■■□□□ 1.4
CPNE1-217ENST00000439669 RP1P56715 2156 aa23.82■■□□□ 1.4
CPNE1-217ENST00000439669 SLC25A14O95258 325 aaPredicted RBP23.81■■□□□ 1.4
CPNE1-217ENST00000439669 GLB1P16278 677 aa23.81■■□□□ 1.4
CPNE1-217ENST00000439669 HMGCLP35914 325 aa23.81■■□□□ 1.4
CPNE1-217ENST00000439669 PEX6Q13608 980 aa23.81■■□□□ 1.4
CPNE1-217ENST00000439669 SPIDRQ14159 915 aa23.81■■□□□ 1.4
CPNE1-217ENST00000439669 RPS6KA1Q15418 735 aa23.81■■□□□ 1.4
CPNE1-217ENST00000439669 CERCAMQ5T4B2 595 aa23.81■■□□□ 1.4
CPNE1-217ENST00000439669 PDPK2PQ6A1A2 396 aa23.81■■□□□ 1.4
CPNE1-217ENST00000439669 ARHGEF18Q6ZSZ5 1173 aa23.81■■□□□ 1.4
CPNE1-217ENST00000439669 TTC30BQ8N4P2 665 aa23.81■■□□□ 1.4
CPNE1-217ENST00000439669 WDR48Q8TAF3 677 aa23.81■■□□□ 1.4
CPNE1-217ENST00000439669 UBE2Q2Q8WVN8 375 aa23.81■■□□□ 1.4
CPNE1-217ENST00000439669 PPP1R2P1Q96PQ5 205 aa23.81■■□□□ 1.4
CPNE1-217ENST00000439669 NRSN2Q9GZP1 204 aa23.81■■□□□ 1.4
CPNE1-217ENST00000439669 ST14Q9Y5Y6 855 aa23.81■■□□□ 1.4
CPNE1-217ENST00000439669 FRYQ5TBA9 3013 aa23.81■■□□□ 1.4
CPNE1-217ENST00000439669 EPG5Q9HCE0 2579 aa23.8■■□□□ 1.4
CPNE1-217ENST00000439669 CASC3O15234 703 aaKnown RBP23.8■■□□□ 1.4
CPNE1-217ENST00000439669 DNAJC6O75061 913 aa23.8■■□□□ 1.4
CPNE1-217ENST00000439669 TCEA3O75764 348 aa23.8■■□□□ 1.4
CPNE1-217ENST00000439669 MAZP56270 477 aaKnown RBP23.8■■□□□ 1.4
CPNE1-217ENST00000439669 BIRC2Q13490 618 aa23.8■■□□□ 1.4
CPNE1-217ENST00000439669 LRP8Q14114 963 aa23.8■■□□□ 1.4
CPNE1-217ENST00000439669 HLTFQ14527 1009 aaKnown RBP eCLIP23.8■■□□□ 1.45e-8■■□□□ 14.2
CPNE1-217ENST00000439669 ISXQ2M1V0 245 aa23.8■■□□□ 1.4
CPNE1-217ENST00000439669 ZNF648Q5T619 568 aaPredicted RBP23.8■■□□□ 1.4
CPNE1-217ENST00000439669 ZNF662Q6ZS27 426 aa23.8■■□□□ 1.4
CPNE1-217ENST00000439669 PHYKPLQ8IUZ5 450 aa23.8■■□□□ 1.4
CPNE1-217ENST00000439669 Q8N9G6 341 aaPredicted RBP23.8■■□□□ 1.4
CPNE1-217ENST00000439669 SLC35B2Q8TB61 432 aa23.8■■□□□ 1.4
CPNE1-217ENST00000439669 GLYATL1Q969I3 302 aa23.8■■□□□ 1.4
CPNE1-217ENST00000439669 PLEKHG4BQ96PX9 1271 aa23.8■■□□□ 1.4
CPNE1-217ENST00000439669 RMI1Q9H9A7 625 aa23.8■■□□□ 1.4
CPNE1-217ENST00000439669 LRIT1Q9P2V4 623 aa23.8■■□□□ 1.4
CPNE1-217ENST00000439669 DKK4Q9UBT3 224 aa23.8■■□□□ 1.4
CPNE1-217ENST00000439669 RNF215Q9Y6U7 377 aa23.8■■□□□ 1.4
CPNE1-217ENST00000439669 GOLGA6L3A6NEY3 463 aa23.79■■□□□ 1.4
CPNE1-217ENST00000439669 C5orf60A6NFR6 353 aa23.79■■□□□ 1.4
CPNE1-217ENST00000439669 SRRM3A6NNA2 597 aaPredicted RBP23.79■■□□□ 1.4
CPNE1-217ENST00000439669 TAF4O00268 1085 aa23.79■■□□□ 1.4
CPNE1-217ENST00000439669 BUD23O43709 281 aaKnown RBP23.79■■□□□ 1.4
CPNE1-217ENST00000439669 RPLP0P05388 317 aaKnown RBP23.79■■□□□ 1.4
CPNE1-217ENST00000439669 OLIG2Q13516 323 aa23.79■■□□□ 1.4
CPNE1-217ENST00000439669 RTP5Q14D33 572 aa23.79■■□□□ 1.4
CPNE1-217ENST00000439669 MEI1Q5TIA1 1274 aa23.79■■□□□ 1.4
CPNE1-217ENST00000439669 CHST15Q7LFX5 561 aaPredicted RBP23.79■■□□□ 1.4
CPNE1-217ENST00000439669 CCNJLQ8IV13 435 aa23.79■■□□□ 1.4
CPNE1-217ENST00000439669 ATG4AQ8WYN0 398 aa23.79■■□□□ 1.4
CPNE1-217ENST00000439669 LRRC45Q96CN5 670 aa23.79■■□□□ 1.4
CPNE1-217ENST00000439669 TMEM121Q9BTD3 319 aa23.79■■□□□ 1.4
CPNE1-217ENST00000439669 OR2AG1Q9H205 316 aa23.79■■□□□ 1.4
CPNE1-217ENST00000439669 CARD9Q9H257 536 aa23.79■■□□□ 1.4
CPNE1-217ENST00000439669 ATXN10Q9UBB4 475 aa23.79■■□□□ 1.4
CPNE1-217ENST00000439669 PKP3Q9Y446 797 aa23.79■■□□□ 1.4
CPNE1-217ENST00000439669 PCYT1BQ9Y5K3 369 aaPredicted RBP23.79■■□□□ 1.4
CPNE1-217ENST00000439669 ARHGEF17Q96PE2 2063 aaPredicted RBP23.79■■□□□ 1.4
CPNE1-217ENST00000439669 SCN8AQ9UQD0 1980 aa23.78■■□□□ 1.4
CPNE1-217ENST00000439669 USP12O75317 370 aa23.78■■□□□ 1.4
CPNE1-217ENST00000439669 ECEL1O95672 775 aa23.78■■□□□ 1.4
CPNE1-217ENST00000439669 ACP5P13686 325 aa23.78■■□□□ 1.4
CPNE1-217ENST00000439669 ZNF8P17098 575 aaPredicted RBP23.78■■□□□ 1.4
CPNE1-217ENST00000439669 ADRA1AP35348 466 aa23.78■■□□□ 1.4
CPNE1-217ENST00000439669 SPAM1P38567 509 aa23.78■■□□□ 1.4
CPNE1-217ENST00000439669 CCL7P80098 99 aa23.78■■□□□ 1.4
CPNE1-217ENST00000439669 ZDHHC20Q5W0Z9 365 aa23.78■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms