RNA–Protein interactions for RNA: ENST00000439468.1

VPS41-207, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 354 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-207ENST00000439468 TAS2R40P59535 323 aa3.51□□□□□ -1.85
VPS41-207ENST00000439468 PPP2R2BQ00005 443 aa3.51□□□□□ -1.85
VPS41-207ENST00000439468 DSC1Q08554 894 aa3.51□□□□□ -1.85
VPS41-207ENST00000439468 ACSM2AQ08AH3 577 aa3.51□□□□□ -1.85
VPS41-207ENST00000439468 Q0VFX4 171 aa3.51□□□□□ -1.85
VPS41-207ENST00000439468 PCLAFQ15004 111 aa3.51□□□□□ -1.85
VPS41-207ENST00000439468 KRT24Q2M2I5 525 aa3.51□□□□□ -1.85
VPS41-207ENST00000439468 IGSF11Q5DX21 431 aa3.51□□□□□ -1.85
VPS41-207ENST00000439468 NSUN5P2Q63ZY6 315 aa3.51□□□□□ -1.85
VPS41-207ENST00000439468 ACSM2BQ68CK6 577 aa3.51□□□□□ -1.85
VPS41-207ENST00000439468 METTL2BQ6P1Q9 378 aaKnown RBP3.51□□□□□ -1.85
VPS41-207ENST00000439468 DUS1LQ6P1R4 473 aaKnown RBP3.51□□□□□ -1.85
VPS41-207ENST00000439468 WDR73Q6P4I2 378 aa3.51□□□□□ -1.85
VPS41-207ENST00000439468 FJX1Q86VR8 437 aa3.51□□□□□ -1.85
VPS41-207ENST00000439468 PGBD5Q8N414 524 aa3.51□□□□□ -1.85
VPS41-207ENST00000439468 RBMXL3Q8N7X1 1067 aaKnown RBP3.51□□□□□ -1.85
VPS41-207ENST00000439468 C1orf131Q8NDD1 294 aaKnown RBP3.51□□□□□ -1.85
VPS41-207ENST00000439468 OR2AK2Q8NG84 335 aa3.51□□□□□ -1.85
VPS41-207ENST00000439468 APBB2Q92870 758 aa3.51□□□□□ -1.85
VPS41-207ENST00000439468 JAKMIP2Q96AA8 810 aa3.51□□□□□ -1.85
VPS41-207ENST00000439468 SLC22A18Q96BI1 424 aa3.51□□□□□ -1.85
VPS41-207ENST00000439468 OTULINQ96BN8 352 aa3.51□□□□□ -1.85
VPS41-207ENST00000439468 ORAI1Q96D31 301 aa3.51□□□□□ -1.85
VPS41-207ENST00000439468 PHF21BQ96EK2 531 aa3.51□□□□□ -1.85
VPS41-207ENST00000439468 METTL2AQ96IZ6 378 aaKnown RBP3.51□□□□□ -1.85
VPS41-207ENST00000439468 LRFN5Q96NI6 719 aa3.51□□□□□ -1.85
VPS41-207ENST00000439468 SERINC2Q96SA4 455 aa3.51□□□□□ -1.85
VPS41-207ENST00000439468 ABHD1Q96SE0 405 aa3.51□□□□□ -1.85
VPS41-207ENST00000439468 SEPT5Q99719 369 aaPredicted RBP3.51□□□□□ -1.85
VPS41-207ENST00000439468 KXD1Q9BQD3 176 aa3.51□□□□□ -1.85
VPS41-207ENST00000439468 SLF1Q9BQI6 1058 aa3.51□□□□□ -1.85
VPS41-207ENST00000439468 SPRY4Q9C004 299 aa3.51□□□□□ -1.85
VPS41-207ENST00000439468 VPS33BQ9H267 617 aa3.51□□□□□ -1.85
VPS41-207ENST00000439468 C6orf106Q9H6K1 298 aaPredicted RBP3.51□□□□□ -1.85
VPS41-207ENST00000439468 CWC15Q9P013 229 aaKnown RBP3.51□□□□□ -1.85
VPS41-207ENST00000439468 IL36RNQ9UBH0 155 aa3.51□□□□□ -1.85
VPS41-207ENST00000439468 OR14J1Q9UGF5 321 aa3.51□□□□□ -1.85
VPS41-207ENST00000439468 TTC7AQ9ULT0 858 aaPredicted RBP3.51□□□□□ -1.85
VPS41-207ENST00000439468 CMAHPQ9Y471 501 aa3.51□□□□□ -1.85
VPS41-207ENST00000439468 PCDHGB1Q9Y5G3 927 aa3.51□□□□□ -1.85
VPS41-207ENST00000439468 MAGED1Q9Y5V3 778 aaPredicted RBP3.51□□□□□ -1.85
VPS41-207ENST00000439468 SNX9Q9Y5X1 595 aa3.51□□□□□ -1.85
VPS41-207ENST00000439468 LINC01553A4QN01 128 aa3.5□□□□□ -1.85
VPS41-207ENST00000439468 M0QZ24 198 aa3.5□□□□□ -1.85
VPS41-207ENST00000439468 SH2B2O14492 632 aaPredicted RBP3.5□□□□□ -1.85
VPS41-207ENST00000439468 WNT9BO14905 357 aa3.5□□□□□ -1.85
VPS41-207ENST00000439468 OGG1O15527 345 aa3.5□□□□□ -1.85
VPS41-207ENST00000439468 PAPSS1O43252 624 aaPredicted RBP3.5□□□□□ -1.85
VPS41-207ENST00000439468 PLRG1O43660 514 aaKnown RBP3.5□□□□□ -1.85
VPS41-207ENST00000439468 EIF5BO60841 1220 aaKnown RBP3.5□□□□□ -1.85
VPS41-207ENST00000439468 DDNO94850 711 aaPredicted RBP3.5□□□□□ -1.85
VPS41-207ENST00000439468 CH25HO95992 272 aa3.5□□□□□ -1.85
VPS41-207ENST00000439468 DNTTP04053 509 aa3.5□□□□□ -1.85
VPS41-207ENST00000439468 MMP9P14780 707 aa3.5□□□□□ -1.85
VPS41-207ENST00000439468 TMEM11P17152 192 aa3.5□□□□□ -1.85
VPS41-207ENST00000439468 GPTP24298 496 aa3.5□□□□□ -1.85
VPS41-207ENST00000439468 C21orf33P30042 268 aaPredicted RBP3.5□□□□□ -1.85
VPS41-207ENST00000439468 NNMTP40261 264 aa3.5□□□□□ -1.85
VPS41-207ENST00000439468 PRCPP42785 496 aa3.5□□□□□ -1.85
VPS41-207ENST00000439468 AMTP48728 403 aa3.5□□□□□ -1.85
VPS41-207ENST00000439468 PDLIM4P50479 330 aa3.5□□□□□ -1.85
VPS41-207ENST00000439468 HSD17B4P51659 736 aa3.5□□□□□ -1.85
VPS41-207ENST00000439468 RRP1P56182 461 aaKnown RBP3.5□□□□□ -1.85
VPS41-207ENST00000439468 BRWD1-AS2P59051 145 aa3.5□□□□□ -1.85
VPS41-207ENST00000439468 ECT2LQ008S8 904 aa3.5□□□□□ -1.85
VPS41-207ENST00000439468 GRIK2Q13002 908 aa3.5□□□□□ -1.85
VPS41-207ENST00000439468 AIMP2Q13155 320 aaKnown RBP3.5□□□□□ -1.85
VPS41-207ENST00000439468 KEAP1Q14145 624 aa3.5□□□□□ -1.85
VPS41-207ENST00000439468 DHX34Q14147 1143 aaKnown RBP3.5□□□□□ -1.85
VPS41-207ENST00000439468 ADIPOQQ15848 244 aa3.5□□□□□ -1.85
VPS41-207ENST00000439468 PNLIPRP3Q17RR3 467 aa3.5□□□□□ -1.85
VPS41-207ENST00000439468 SOWAHCQ53LP3 525 aaPredicted RBP3.5□□□□□ -1.85
VPS41-207ENST00000439468 ZNF805Q5CZA5 627 aa3.5□□□□□ -1.85
VPS41-207ENST00000439468 FAM69BQ5VUD6 431 aa3.5□□□□□ -1.85
VPS41-207ENST00000439468 GGNBP1Q5YKI7 109 aa3.5□□□□□ -1.85
VPS41-207ENST00000439468 TMCO3Q6UWJ1 677 aa3.5□□□□□ -1.85
VPS41-207ENST00000439468 DLK2Q6UY11 383 aa3.5□□□□□ -1.85
VPS41-207ENST00000439468 TSPAN33Q86UF1 283 aa3.5□□□□□ -1.85
VPS41-207ENST00000439468 NR2C2APQ86WQ0 139 aa3.5□□□□□ -1.85
VPS41-207ENST00000439468 RNF168Q8IYW5 571 aaPredicted RBP3.5□□□□□ -1.85
VPS41-207ENST00000439468 ZNF34Q8IZ26 560 aa3.5□□□□□ -1.85
VPS41-207ENST00000439468 SCYL3Q8IZE3 742 aa3.5□□□□□ -1.85
VPS41-207ENST00000439468 DSELQ8IZU8 1212 aa3.5□□□□□ -1.85
VPS41-207ENST00000439468 OR14A16Q8NHC5 309 aa3.5□□□□□ -1.85
VPS41-207ENST00000439468 HM13Q8TCT9 377 aa3.5□□□□□ -1.85
VPS41-207ENST00000439468 SGCDQ92629 289 aa3.5□□□□□ -1.85
VPS41-207ENST00000439468 HARBI1Q96MB7 349 aa3.5□□□□□ -1.85
VPS41-207ENST00000439468 CMKLR1Q99788 373 aa3.5□□□□□ -1.85
VPS41-207ENST00000439468 SLC25A33Q9BSK2 321 aa3.5□□□□□ -1.85
VPS41-207ENST00000439468 KLHL4Q9C0H6 718 aa3.5□□□□□ -1.85
VPS41-207ENST00000439468 HRH4Q9H3N8 390 aa3.5□□□□□ -1.85
VPS41-207ENST00000439468 OCIAD1Q9NX40 245 aa3.5□□□□□ -1.85
VPS41-207ENST00000439468 NKIRAS2Q9NYR9 191 aa3.5□□□□□ -1.85
VPS41-207ENST00000439468 WSB2Q9NYS7 404 aaPredicted RBP3.5□□□□□ -1.85
VPS41-207ENST00000439468 PADI3Q9ULW8 664 aa3.5□□□□□ -1.85
VPS41-207ENST00000439468 PAM16Q9Y3D7 125 aa3.5□□□□□ -1.85
VPS41-207ENST00000439468 EME2A4GXA9 379 aaPredicted RBP3.49□□□□□ -1.85
VPS41-207ENST00000439468 CD58P19256 250 aa3.49□□□□□ -1.85
VPS41-207ENST00000439468 RRM1P23921 792 aa3.49□□□□□ -1.85
VPS41-207ENST00000439468 BDKRB2P30411 391 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms