RNA–Protein interactions for RNA: ENST00000437600.8

CUX1-206, Transcript of cut like homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CUX1, Length 3,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-206ENST00000437600 AMIGO2Q86SJ2 522 aa9.44□□□□□ -0.9
CUX1-206ENST00000437600 IFNEQ86WN2 208 aa9.44□□□□□ -0.9
CUX1-206ENST00000437600 HS6ST3Q8IZP7 471 aa9.44□□□□□ -0.9
CUX1-206ENST00000437600 OR4L1Q8NH43 312 aa9.44□□□□□ -0.9
CUX1-206ENST00000437600 HTATIP2Q9BUP3 242 aa9.44□□□□□ -0.9
CUX1-206ENST00000437600 GSTO2Q9H4Y5 243 aa9.44□□□□□ -0.9
CUX1-206ENST00000437600 ARNT2Q9HBZ2 717 aa9.44□□□□□ -0.9
CUX1-206ENST00000437600 POLR3BQ9NW08 1133 aaPredicted RBP9.44□□□□□ -0.9
CUX1-206ENST00000437600 AGO1Q9UL18 857 aaKnown RBP9.44□□□□□ -0.9
CUX1-206ENST00000437600 GOLGA4Q13439 2230 aaKnown RBP9.44□□□□□ -0.9
CUX1-206ENST00000437600 HIDE1A8MVS5 230 aa9.43□□□□□ -0.9
CUX1-206ENST00000437600 NIPSNAP2O75323 286 aa9.43□□□□□ -0.9
CUX1-206ENST00000437600 FKBP6O75344 327 aa9.43□□□□□ -0.9
CUX1-206ENST00000437600 ABLIM3O94929 683 aa9.43□□□□□ -0.9
CUX1-206ENST00000437600 SERPINF2P08697 491 aa9.43□□□□□ -0.9
CUX1-206ENST00000437600 CNPP09543 421 aaKnown RBP9.43□□□□□ -0.9
CUX1-206ENST00000437600 ALDOCP09972 364 aaKnown RBP9.43□□□□□ -0.9
CUX1-206ENST00000437600 ERVFC1P60507 584 aa9.43□□□□□ -0.9
CUX1-206ENST00000437600 GNA12Q03113 381 aa9.43□□□□□ -0.9
CUX1-206ENST00000437600 PTK2BQ14289 1009 aa9.43□□□□□ -0.9
CUX1-206ENST00000437600 KIF19Q2TAC6 998 aa9.43□□□□□ -0.9
CUX1-206ENST00000437600 ATXN7L2Q5T6C5 722 aaPredicted RBP9.43□□□□□ -0.9
CUX1-206ENST00000437600 IL23RQ5VWK5 629 aa9.43□□□□□ -0.9
CUX1-206ENST00000437600 PSAPL1Q6NUJ1 521 aa9.43□□□□□ -0.9
CUX1-206ENST00000437600 UGT3A1Q6NUS8 523 aa9.43□□□□□ -0.9
CUX1-206ENST00000437600 IYDQ6PHW0 289 aa9.43□□□□□ -0.9
CUX1-206ENST00000437600 PIWIL4Q7Z3Z4 852 aaKnown RBP9.43□□□□□ -0.9
CUX1-206ENST00000437600 ARHGAP22Q7Z5H3 698 aa9.43□□□□□ -0.9
CUX1-206ENST00000437600 TMEM150AQ86TG1 271 aa9.43□□□□□ -0.9
CUX1-206ENST00000437600 RNF168Q8IYW5 571 aaPredicted RBP9.43□□□□□ -0.9
CUX1-206ENST00000437600 ARL10Q8N8L6 244 aa9.43□□□□□ -0.9
CUX1-206ENST00000437600 SLC22A17Q8WUG5 538 aa9.43□□□□□ -0.9
CUX1-206ENST00000437600 ANKRD27Q96NW4 1050 aa9.43□□□□□ -0.9
CUX1-206ENST00000437600 PKP2Q99959 881 aa9.43□□□□□ -0.9
CUX1-206ENST00000437600 PRKD2Q9BZL6 878 aa9.43□□□□□ -0.9
CUX1-206ENST00000437600 KLHL4Q9C0H6 718 aa9.43□□□□□ -0.9
CUX1-206ENST00000437600 MUC3BQ9H195 1237 aa9.43□□□□□ -0.9
CUX1-206ENST00000437600 AKTIPQ9H8T0 292 aa9.43□□□□□ -0.9
CUX1-206ENST00000437600 ATP13A1Q9HD20 1204 aa9.43□□□□□ -0.9
CUX1-206ENST00000437600 SPG21Q9NZD8 308 aa9.43□□□□□ -0.9
CUX1-206ENST00000437600 LMCD1Q9NZU5 365 aa9.43□□□□□ -0.9
CUX1-206ENST00000437600 STK39Q9UEW8 545 aa9.43□□□□□ -0.9
CUX1-206ENST00000437600 EGFL7Q9UHF1 273 aa9.43□□□□□ -0.9
CUX1-206ENST00000437600 PRORSD1PA6NEY8 169 aa9.43□□□□□ -0.9
CUX1-206ENST00000437600 PSMD12O00232 456 aaPredicted RBP9.43□□□□□ -0.9
CUX1-206ENST00000437600 TPST1O60507 370 aa9.43□□□□□ -0.9
CUX1-206ENST00000437600 RHOBTB1O94844 696 aa9.43□□□□□ -0.9
CUX1-206ENST00000437600 CDK14O94921 469 aa9.43□□□□□ -0.9
CUX1-206ENST00000437600 COL6A2P12110 1019 aa9.43□□□□□ -0.9
CUX1-206ENST00000437600 HOXD9P28356 352 aaPredicted RBP9.43□□□□□ -0.9
CUX1-206ENST00000437600 MZF1P28698 734 aaPredicted RBP9.43□□□□□ -0.9
CUX1-206ENST00000437600 SLC11A2P49281 568 aa9.43□□□□□ -0.9
CUX1-206ENST00000437600 DIO3P55073 304 aa9.43□□□□□ -0.9
CUX1-206ENST00000437600 PFKPQ01813 784 aa9.43□□□□□ -0.9
CUX1-206ENST00000437600 FRG1Q14331 258 aaKnown RBP9.43□□□□□ -0.9
CUX1-206ENST00000437600 PTPRNQ16849 979 aa9.43□□□□□ -0.9
CUX1-206ENST00000437600 PIGGQ5H8A4 983 aa9.43□□□□□ -0.9
CUX1-206ENST00000437600 PLPP4Q5VZY2 271 aa9.43□□□□□ -0.9
CUX1-206ENST00000437600 PSRC1Q6PGN9 363 aaPredicted RBP9.43□□□□□ -0.9
CUX1-206ENST00000437600 TPGS1Q6ZTW0 290 aa9.43□□□□□ -0.9
CUX1-206ENST00000437600 CARNMT1Q8N4J0 409 aa9.43□□□□□ -0.9
CUX1-206ENST00000437600 RDH11Q8TC12 318 aa9.43□□□□□ -0.9
CUX1-206ENST00000437600 WFDC5Q8TCV5 224 aa9.43□□□□□ -0.9
CUX1-206ENST00000437600 CNDP1Q96KN2 507 aa9.43□□□□□ -0.9
CUX1-206ENST00000437600 GPR21Q99679 349 aa9.43□□□□□ -0.9
CUX1-206ENST00000437600 TTLL2Q9BWV7 592 aa9.43□□□□□ -0.9
CUX1-206ENST00000437600 MRPL1Q9BYD6 325 aaKnown RBP9.43□□□□□ -0.9
CUX1-206ENST00000437600 MRPL17Q9NRX2 175 aaKnown RBP9.43□□□□□ -0.9
CUX1-206ENST00000437600 APPL1Q9UKG1 709 aa9.43□□□□□ -0.9
CUX1-206ENST00000437600 FCF1Q9Y324 198 aaKnown RBP9.43□□□□□ -0.9
CUX1-206ENST00000437600 ASB3Q9Y575 518 aa9.43□□□□□ -0.9
CUX1-206ENST00000437600 INSL6Q9Y581 213 aa9.43□□□□□ -0.9
CUX1-206ENST00000437600 INSL5Q9Y5Q6 135 aa9.43□□□□□ -0.9
CUX1-206ENST00000437600 BACE2Q9Y5Z0 518 aa9.43□□□□□ -0.9
CUX1-206ENST00000437600 PLXNA3P51805 1871 aa9.43□□□□□ -0.9
CUX1-206ENST00000437600 COL4A4P53420 1690 aaPredicted RBP9.43□□□□□ -0.9
CUX1-206ENST00000437600 A0A087X1B8 175 aa9.42□□□□□ -0.9
CUX1-206ENST00000437600 A0A1B0GTW7 788 aa9.42□□□□□ -0.9
CUX1-206ENST00000437600 PRAMEF11O60813 436 aa9.42□□□□□ -0.9
CUX1-206ENST00000437600 RNASEH2AO75792 299 aaKnown RBP9.42□□□□□ -0.9
CUX1-206ENST00000437600 SRP72O76094 671 aaKnown RBP9.42□□□□□ -0.9
CUX1-206ENST00000437600 EFEMP2O95967 443 aa9.42□□□□□ -0.9
CUX1-206ENST00000437600 PRLP01236 227 aa9.42□□□□□ -0.9
CUX1-206ENST00000437600 CKMP06732 381 aa9.42□□□□□ -0.9
CUX1-206ENST00000437600 ALPIP09923 528 aa9.42□□□□□ -0.9
CUX1-206ENST00000437600 MTHFD2P13995 350 aa9.42□□□□□ -0.9
CUX1-206ENST00000437600 CD1DP15813 335 aa9.42□□□□□ -0.9
CUX1-206ENST00000437600 RPL10P27635 214 aaKnown RBP9.42□□□□□ -0.9
CUX1-206ENST00000437600 GABRR2P28476 465 aa9.42□□□□□ -0.9
CUX1-206ENST00000437600 IRS1P35568 1242 aa9.42□□□□□ -0.9
CUX1-206ENST00000437600 CREB5Q02930 508 aa9.42□□□□□ -0.9
CUX1-206ENST00000437600 FOLH1Q04609 750 aa9.42□□□□□ -0.9
CUX1-206ENST00000437600 IL10RBQ08334 325 aa9.42□□□□□ -0.9
CUX1-206ENST00000437600 VEPH1Q14D04 833 aa9.42□□□□□ -0.9
CUX1-206ENST00000437600 ACAP2Q15057 778 aa9.42□□□□□ -0.9
CUX1-206ENST00000437600 ZRANB3Q5FWF4 1079 aa9.42□□□□□ -0.9
CUX1-206ENST00000437600 ZNF678Q5SXM1 525 aa9.42□□□□□ -0.9
CUX1-206ENST00000437600 C6orf52Q5T4I8 152 aa9.42□□□□□ -0.9
CUX1-206ENST00000437600 IRGCQ6NXR0 463 aa9.42□□□□□ -0.9
CUX1-206ENST00000437600 TAS2R42Q7RTR8 314 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms