RNA–Protein interactions for RNA: ENST00000436412.1

NIF3L1-208, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 3

Gene NIF3L1, Length 479 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-208ENST00000436412 CACNB4O00305 520 aaPredicted RBP8.42□□□□□ -1.06
NIF3L1-208ENST00000436412 BIN1O00499 593 aa8.42□□□□□ -1.06
NIF3L1-208ENST00000436412 RAD1O60671 282 aa8.42□□□□□ -1.06
NIF3L1-208ENST00000436412 IGSF6O95976 241 aa8.42□□□□□ -1.06
NIF3L1-208ENST00000436412 ERBB2P04626 1255 aa8.42□□□□□ -1.06
NIF3L1-208ENST00000436412 TFE3P19532 575 aaPredicted RBP8.42□□□□□ -1.06
NIF3L1-208ENST00000436412 CSTF2P33240 577 aaKnown RBP eCLIP8.42□□□□□ -1.06
NIF3L1-208ENST00000436412 KRT9P35527 623 aa8.42□□□□□ -1.06
NIF3L1-208ENST00000436412 ACVRL1P37023 503 aa8.42□□□□□ -1.06
NIF3L1-208ENST00000436412 TSPAN7P41732 249 aa8.42□□□□□ -1.06
NIF3L1-208ENST00000436412 LIMK2P53671 638 aa8.42□□□□□ -1.06
NIF3L1-208ENST00000436412 KIAA1024LP59773 190 aa8.42□□□□□ -1.06
NIF3L1-208ENST00000436412 RNASE9P60153 205 aaKnown RBP8.42□□□□□ -1.06
NIF3L1-208ENST00000436412 PNOCQ13519 176 aa8.42□□□□□ -1.06
NIF3L1-208ENST00000436412 PEX6Q13608 980 aa8.42□□□□□ -1.06
NIF3L1-208ENST00000436412 GRM3Q14832 879 aa8.42□□□□□ -1.06
NIF3L1-208ENST00000436412 TCEA2Q15560 299 aa8.42□□□□□ -1.06
NIF3L1-208ENST00000436412 AMZ1Q400G9 498 aa8.42□□□□□ -1.06
NIF3L1-208ENST00000436412 PTPN20Q4JDL3 420 aa8.42□□□□□ -1.06
NIF3L1-208ENST00000436412 INO80DQ53TQ3 878 aaPredicted RBP8.42□□□□□ -1.06
NIF3L1-208ENST00000436412 ERAP2Q6P179 960 aa8.42□□□□□ -1.06
NIF3L1-208ENST00000436412 HDXQ7Z353 690 aa8.42□□□□□ -1.06
NIF3L1-208ENST00000436412 C17orf82Q86X59 251 aaPredicted RBP8.42□□□□□ -1.06
NIF3L1-208ENST00000436412 TRIM59Q8IWR1 403 aa8.42□□□□□ -1.06
NIF3L1-208ENST00000436412 OR4D9Q8NGE8 314 aa8.42□□□□□ -1.06
NIF3L1-208ENST00000436412 OR56A4Q8NGH8 313 aa8.42□□□□□ -1.06
NIF3L1-208ENST00000436412 HMCESQ96FZ2 354 aa8.42□□□□□ -1.06
NIF3L1-208ENST00000436412 PDXPQ96GD0 296 aa8.42□□□□□ -1.06
NIF3L1-208ENST00000436412 TBCBQ99426 244 aa8.42□□□□□ -1.06
NIF3L1-208ENST00000436412 ZPBPQ9BS86 351 aa8.42□□□□□ -1.06
NIF3L1-208ENST00000436412 TRIT1Q9H3H1 467 aaKnown RBP8.42□□□□□ -1.06
NIF3L1-208ENST00000436412 GOLPH3LQ9H4A5 285 aa8.42□□□□□ -1.06
NIF3L1-208ENST00000436412 DPEP2Q9H4A9 486 aa8.42□□□□□ -1.06
NIF3L1-208ENST00000436412 GPN2Q9H9Y4 310 aaPredicted RBP8.42□□□□□ -1.06
NIF3L1-208ENST00000436412 RDH14Q9HBH5 336 aa8.42□□□□□ -1.06
NIF3L1-208ENST00000436412 OR1A2Q9Y585 309 aa8.42□□□□□ -1.06
NIF3L1-208ENST00000436412 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.42□□□□□ -1.06
NIF3L1-208ENST00000436412 B3GALT1Q9Y5Z6 326 aa8.42□□□□□ -1.06
NIF3L1-208ENST00000436412 OTOGQ6ZRI0 2925 aa8.42□□□□□ -1.06
NIF3L1-208ENST00000436412 ZFHX3Q15911 3703 aa8.41□□□□□ -1.06
NIF3L1-208ENST00000436412 CNTRLQ7Z7A1 2325 aa8.41□□□□□ -1.06
NIF3L1-208ENST00000436412 BICDL2A1A5D9 508 aa8.41□□□□□ -1.06
NIF3L1-208ENST00000436412 TSPAN11A1L157 253 aa8.41□□□□□ -1.06
NIF3L1-208ENST00000436412 BECN2A8MW95 431 aa8.41□□□□□ -1.06
NIF3L1-208ENST00000436412 NKX2-8O15522 239 aa8.41□□□□□ -1.06
NIF3L1-208ENST00000436412 KDELR3O43731 214 aa8.41□□□□□ -1.06
NIF3L1-208ENST00000436412 RAMP2O60895 175 aa8.41□□□□□ -1.06
NIF3L1-208ENST00000436412 AGFG2O95081 481 aa8.41□□□□□ -1.06
NIF3L1-208ENST00000436412 CD1CP29017 333 aa8.41□□□□□ -1.06
NIF3L1-208ENST00000436412 ALDH4A1P30038 563 aa8.41□□□□□ -1.06
NIF3L1-208ENST00000436412 MAN1A1P33908 653 aa8.41□□□□□ -1.06
NIF3L1-208ENST00000436412 TRIM23P36406 574 aa8.41□□□□□ -1.06
NIF3L1-208ENST00000436412 USP8P40818 1118 aa8.41□□□□□ -1.06
NIF3L1-208ENST00000436412 STAT1P42224 750 aa8.41□□□□□ -1.06
NIF3L1-208ENST00000436412 GABRB2P47870 512 aa8.41□□□□□ -1.06
NIF3L1-208ENST00000436412 OR1D5P58170 312 aa8.41□□□□□ -1.06
NIF3L1-208ENST00000436412 CDC20Q12834 499 aa8.41□□□□□ -1.06
NIF3L1-208ENST00000436412 PKP1Q13835 747 aa8.41□□□□□ -1.06
NIF3L1-208ENST00000436412 UGP2Q16851 508 aa8.41□□□□□ -1.06
NIF3L1-208ENST00000436412 LRRC73Q5JTD7 316 aa8.41□□□□□ -1.06
NIF3L1-208ENST00000436412 WIPI1Q5MNZ9 446 aaPredicted RBP8.41□□□□□ -1.06
NIF3L1-208ENST00000436412 ATXN7L2Q5T6C5 722 aaPredicted RBP8.41□□□□□ -1.06
NIF3L1-208ENST00000436412 DCAF12Q5T6F0 453 aa8.41□□□□□ -1.06
NIF3L1-208ENST00000436412 FHL5Q5TD97 284 aa8.41□□□□□ -1.06
NIF3L1-208ENST00000436412 TCTN3Q6NUS6 607 aa8.41□□□□□ -1.06
NIF3L1-208ENST00000436412 BRAT1Q6PJG6 821 aa8.41□□□□□ -1.06
NIF3L1-208ENST00000436412 ARCQ7LC44 396 aa8.41□□□□□ -1.06
NIF3L1-208ENST00000436412 BNIPLQ7Z465 357 aa8.41□□□□□ -1.06
NIF3L1-208ENST00000436412 NLRP14Q86W24 1093 aa8.41□□□□□ -1.06
NIF3L1-208ENST00000436412 PASD1Q8IV76 773 aa8.41□□□□□ -1.06
NIF3L1-208ENST00000436412 NLGN4XQ8N0W4 816 aa8.41□□□□□ -1.06
NIF3L1-208ENST00000436412 TEX19Q8NA77 164 aa8.41□□□□□ -1.06
NIF3L1-208ENST00000436412 NLGN4YQ8NFZ3 816 aaPredicted RBP8.41□□□□□ -1.06
NIF3L1-208ENST00000436412 ASB11Q8WXH4 323 aa8.41□□□□□ -1.06
NIF3L1-208ENST00000436412 OR1E3Q8WZA6 343 aa8.41□□□□□ -1.06
NIF3L1-208ENST00000436412 SHC3Q92529 594 aa8.41□□□□□ -1.06
NIF3L1-208ENST00000436412 ART4Q93070 314 aa8.41□□□□□ -1.06
NIF3L1-208ENST00000436412 SMARCE1Q969G3 411 aa8.41□□□□□ -1.06
NIF3L1-208ENST00000436412 CCDC74BQ96LY2 380 aa8.41□□□□□ -1.06
NIF3L1-208ENST00000436412 TMEM168Q9H0V1 697 aa8.41□□□□□ -1.06
NIF3L1-208ENST00000436412 FGF22Q9HCT0 170 aa8.41□□□□□ -1.06
NIF3L1-208ENST00000436412 PRDM8Q9NQV8 689 aa8.41□□□□□ -1.06
NIF3L1-208ENST00000436412 TMEM248Q9NWD8 314 aa8.41□□□□□ -1.06
NIF3L1-208ENST00000436412 SLC39A1Q9NY26 324 aa8.41□□□□□ -1.06
NIF3L1-208ENST00000436412 OR12D3Q9UGF7 316 aa8.41□□□□□ -1.06
NIF3L1-208ENST00000436412 HOOK1Q9UJC3 728 aaKnown RBP8.41□□□□□ -1.06
NIF3L1-208ENST00000436412 PILRAQ9UKJ1 303 aa8.41□□□□□ -1.06
NIF3L1-208ENST00000436412 COQ6Q9Y2Z9 468 aa8.41□□□□□ -1.06
NIF3L1-208ENST00000436412 KCTD3Q9Y597 815 aa8.41□□□□□ -1.06
NIF3L1-208ENST00000436412 ACTL7AQ9Y615 435 aa8.41□□□□□ -1.06
NIF3L1-208ENST00000436412 NAV3Q8IVL0 2385 aa8.4□□□□□ -1.06
NIF3L1-208ENST00000436412 SEC16AO15027 2179 aa8.4□□□□□ -1.06
NIF3L1-208ENST00000436412 TMEM202A6NGA9 273 aa8.4□□□□□ -1.06
NIF3L1-208ENST00000436412 MKRN2OSH3BPM6 223 aa8.4□□□□□ -1.06
NIF3L1-208ENST00000436412 MTSS1O43312 755 aa8.4□□□□□ -1.06
NIF3L1-208ENST00000436412 BUB1O43683 1085 aa8.4□□□□□ -1.06
NIF3L1-208ENST00000436412 VPS4BO75351 444 aa8.4□□□□□ -1.06
NIF3L1-208ENST00000436412 TMCC1O94876 653 aa8.4□□□□□ -1.06
NIF3L1-208ENST00000436412 THRAP10827 490 aa8.4□□□□□ -1.06
NIF3L1-208ENST00000436412 CCNB1P14635 433 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms