RNA–Protein interactions for RNA: ENST00000436177.5

VPS50-203, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-203ENST00000436177 DPTQ07507 201 aa7.71□□□□□ -1.18
VPS50-203ENST00000436177 IFI16Q16666 785 aaKnown RBP7.71□□□□□ -1.18
VPS50-203ENST00000436177 ODF2Q5BJF6 829 aa7.71□□□□□ -1.18
VPS50-203ENST00000436177 SNAP47Q5SQN1 464 aa7.71□□□□□ -1.18
VPS50-203ENST00000436177 DCAF12Q5T6F0 453 aa7.71□□□□□ -1.18
VPS50-203ENST00000436177 NKAIN2Q5VXU1 208 aa7.71□□□□□ -1.18
VPS50-203ENST00000436177 E4F1Q66K89 784 aaPredicted RBP7.71□□□□□ -1.18
VPS50-203ENST00000436177 ZNF765Q7L2R6 523 aa7.71□□□□□ -1.18
VPS50-203ENST00000436177 NRROSQ86YC3 692 aa7.71□□□□□ -1.18
VPS50-203ENST00000436177 PHYKPLQ8IUZ5 450 aa7.71□□□□□ -1.18
VPS50-203ENST00000436177 TP53INP2Q8IXH6 220 aa7.71□□□□□ -1.18
VPS50-203ENST00000436177 CACNA2D3Q8IZS8 1091 aa7.71□□□□□ -1.18
VPS50-203ENST00000436177 PELI3Q8N2H9 469 aa7.71□□□□□ -1.18
VPS50-203ENST00000436177 PGBD5Q8N414 524 aa7.71□□□□□ -1.18
VPS50-203ENST00000436177 NIPA2Q8N8Q9 360 aa7.71□□□□□ -1.18
VPS50-203ENST00000436177 CCNYQ8ND76 341 aa7.71□□□□□ -1.18
VPS50-203ENST00000436177 LPCAT1Q8NF37 534 aa7.71□□□□□ -1.18
VPS50-203ENST00000436177 EXD1Q8NHP7 514 aa7.71□□□□□ -1.18
VPS50-203ENST00000436177 CCHCR1Q8TD31 782 aa7.71□□□□□ -1.18
VPS50-203ENST00000436177 PATE1Q8WXA2 126 aa7.71□□□□□ -1.18
VPS50-203ENST00000436177 SH3KBP1Q96B97 665 aa7.71□□□□□ -1.18
VPS50-203ENST00000436177 IQCDQ96DY2 449 aa7.71□□□□□ -1.18
VPS50-203ENST00000436177 TEFMQ96QE5 360 aaKnown RBP7.71□□□□□ -1.18
VPS50-203ENST00000436177 RIOK2Q9BVS4 552 aaKnown RBP7.71□□□□□ -1.18
VPS50-203ENST00000436177 DDA1Q9BW61 102 aa7.71□□□□□ -1.18
VPS50-203ENST00000436177 ADGRE3Q9BY15 652 aa7.71□□□□□ -1.18
VPS50-203ENST00000436177 THAP2Q9H0W7 228 aa7.71□□□□□ -1.18
VPS50-203ENST00000436177 ISCUQ9H1K1 167 aa7.71□□□□□ -1.18
VPS50-203ENST00000436177 ABCG8Q9H221 673 aa7.71□□□□□ -1.18
VPS50-203ENST00000436177 HSD3B7Q9H2F3 369 aa7.71□□□□□ -1.18
VPS50-203ENST00000436177 RBM22Q9NW64 420 aaKnown RBP eCLIP7.71□□□□□ -1.18
VPS50-203ENST00000436177 LCMT1Q9UIC8 334 aa7.71□□□□□ -1.18
VPS50-203ENST00000436177 RPL26L1Q9UNX3 145 aaKnown RBP7.71□□□□□ -1.18
VPS50-203ENST00000436177 IGHV1OR21-1A0A087WYE8 117 aa7.7□□□□□ -1.18
VPS50-203ENST00000436177 A0A0J9YYE9 177 aa7.7□□□□□ -1.18
VPS50-203ENST00000436177 C1orf232A0A0U1RR37 186 aa7.7□□□□□ -1.18
VPS50-203ENST00000436177 EFCAB7A8K855 629 aa7.7□□□□□ -1.18
VPS50-203ENST00000436177 ZNF891A8MT65 544 aaPredicted RBP7.7□□□□□ -1.18
VPS50-203ENST00000436177 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.7□□□□□ -1.18
VPS50-203ENST00000436177 GOLGA6L19H0YKK7 550 aa7.7□□□□□ -1.18
VPS50-203ENST00000436177 SNX2O60749 519 aa7.7□□□□□ -1.18
VPS50-203ENST00000436177 MTA2O94776 668 aa7.7□□□□□ -1.18
VPS50-203ENST00000436177 MAP3K6O95382 1288 aa7.7□□□□□ -1.18
VPS50-203ENST00000436177 PEX11BO96011 259 aa7.7□□□□□ -1.18
VPS50-203ENST00000436177 TRBC1P01850 177 aa7.7□□□□□ -1.18
VPS50-203ENST00000436177 SLC4A1P02730 911 aa7.7□□□□□ -1.18
VPS50-203ENST00000436177 SERPING1P05155 500 aa7.7□□□□□ -1.18
VPS50-203ENST00000436177 KRT7P08729 469 aa7.7□□□□□ -1.18
VPS50-203ENST00000436177 ACP5P13686 325 aa7.7□□□□□ -1.18
VPS50-203ENST00000436177 TCF4P15884 667 aa7.7□□□□□ -1.18
VPS50-203ENST00000436177 MPSTP25325 297 aa7.7□□□□□ -1.18
VPS50-203ENST00000436177 TNNT3P45378 269 aaPredicted RBP7.7□□□□□ -1.18
VPS50-203ENST00000436177 CSRP3P50461 194 aa7.7□□□□□ -1.18
VPS50-203ENST00000436177 STC1P52823 247 aa7.7□□□□□ -1.18
VPS50-203ENST00000436177 LIMK2P53671 638 aa7.7□□□□□ -1.18
VPS50-203ENST00000436177 DSC2Q02487 901 aa7.7□□□□□ -1.18
VPS50-203ENST00000436177 HHEXQ03014 270 aa7.7□□□□□ -1.18
VPS50-203ENST00000436177 SRSF6Q13247 344 aaKnown RBP7.7□□□□□ -1.18
VPS50-203ENST00000436177 NFATC2Q13469 925 aa7.7□□□□□ -1.18
VPS50-203ENST00000436177 NR1D2Q14995 579 aa7.7□□□□□ -1.18
VPS50-203ENST00000436177 TBR1Q16650 682 aa7.7□□□□□ -1.18
VPS50-203ENST00000436177 ANKRD20A8PQ5CZ79 823 aa7.7□□□□□ -1.18
VPS50-203ENST00000436177 FIGNQ5HY92 759 aa7.7□□□□□ -1.18
VPS50-203ENST00000436177 ZNF569Q5MCW4 686 aa7.7□□□□□ -1.18
VPS50-203ENST00000436177 CAVIN1Q6NZI2 390 aaKnown RBP7.7□□□□□ -1.18
VPS50-203ENST00000436177 BORAQ6PGQ7 559 aa7.7□□□□□ -1.18
VPS50-203ENST00000436177 TMPRSS9Q7Z410 1059 aa7.7□□□□□ -1.18
VPS50-203ENST00000436177 KDELC2Q7Z4H8 507 aa7.7□□□□□ -1.18
VPS50-203ENST00000436177 C17orf82Q86X59 251 aaPredicted RBP7.7□□□□□ -1.18
VPS50-203ENST00000436177 ZNF761Q86XN6 746 aaPredicted RBP7.7□□□□□ -1.18
VPS50-203ENST00000436177 TRIM48Q8IWZ4 208 aa7.7□□□□□ -1.18
VPS50-203ENST00000436177 NAGSQ8N159 534 aa7.7□□□□□ -1.18
VPS50-203ENST00000436177 ZNF564Q8TBZ8 553 aaPredicted RBP7.7□□□□□ -1.18
VPS50-203ENST00000436177 TRAF3IP1Q8TDR0 691 aaPredicted RBP7.7□□□□□ -1.18
VPS50-203ENST00000436177 SLC37A2Q8TED4 501 aa7.7□□□□□ -1.18
VPS50-203ENST00000436177 PIH1D2Q8WWB5 315 aa7.7□□□□□ -1.18
VPS50-203ENST00000436177 CTNNBL1Q8WYA6 563 aaPredicted RBP7.7□□□□□ -1.18
VPS50-203ENST00000436177 SYN2Q92777 582 aaPredicted RBP7.7□□□□□ -1.18
VPS50-203ENST00000436177 SCAMP4Q969E2 229 aa7.7□□□□□ -1.18
VPS50-203ENST00000436177 ZNF670Q9BS34 389 aa7.7□□□□□ -1.18
VPS50-203ENST00000436177 HERPUD2Q9BSE4 406 aa7.7□□□□□ -1.18
VPS50-203ENST00000436177 EFHD1Q9BUP0 239 aa7.7□□□□□ -1.18
VPS50-203ENST00000436177 TRIM4Q9C037 500 aa7.7□□□□□ -1.18
VPS50-203ENST00000436177 OSGEPL1Q9H4B0 414 aa7.7□□□□□ -1.18
VPS50-203ENST00000436177 EPB41L1Q9H4G0 881 aa7.7□□□□□ -1.18
VPS50-203ENST00000436177 GPN2Q9H9Y4 310 aaPredicted RBP7.7□□□□□ -1.18
VPS50-203ENST00000436177 PKD2L2Q9NZM6 624 aa7.7□□□□□ -1.18
VPS50-203ENST00000436177 VPS18Q9P253 973 aa7.7□□□□□ -1.18
VPS50-203ENST00000436177 CTTNBP2NLQ9P2B4 639 aa7.7□□□□□ -1.18
VPS50-203ENST00000436177 AMACRQ9UHK6 382 aa7.7□□□□□ -1.18
VPS50-203ENST00000436177 CHKBQ9Y259 395 aa7.7□□□□□ -1.18
VPS50-203ENST00000436177 LUC7L2Q9Y383 392 aaKnown RBP7.7□□□□□ -1.18
VPS50-203ENST00000436177 PCDHGA3Q9Y5H0 932 aa7.7□□□□□ -1.18
VPS50-203ENST00000436177 BOD1L1Q8NFC6 3051 aa7.7□□□□□ -1.18
VPS50-203ENST00000436177 KIF26BQ2KJY2 2108 aa7.7□□□□□ -1.18
VPS50-203ENST00000436177 UNC13CQ8NB66 2214 aa7.7□□□□□ -1.18
VPS50-203ENST00000436177 RP1L1Q8IWN7 2480 aaPredicted RBP7.69□□□□□ -1.18
VPS50-203ENST00000436177 TRBV23OR9-2A0A075B6M9 112 aa7.69□□□□□ -1.18
VPS50-203ENST00000436177 KIR2DS5A0A0G2JLQ3 304 aa7.69□□□□□ -1.18
VPS50-203ENST00000436177 A0A0G2JNG1 304 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms