RNA–Protein interactions for RNA: ENST00000435607.3

SCN4A-201, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN4A, Length 7,805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-201ENST00000435607 CST1P01037 141 aa11.15□□□□□ -0.62
SCN4A-201ENST00000435607 TRBC1P01850 177 aa11.15□□□□□ -0.62
SCN4A-201ENST00000435607 ACTR1AP61163 376 aa11.15□□□□□ -0.62
SCN4A-201ENST00000435607 PGM2L1Q6PCE3 622 aa11.15□□□□□ -0.62
SCN4A-201ENST00000435607 VASH1Q7L8A9 365 aaPredicted RBP11.15□□□□□ -0.62
SCN4A-201ENST00000435607 RNF17Q9BXT8 1623 aaKnown RBP11.15□□□□□ -0.62
SCN4A-201ENST00000435607 CASKO14936 926 aa11.15□□□□□ -0.62
SCN4A-201ENST00000435607 IRAK1P51617 712 aa11.15□□□□□ -0.62
SCN4A-201ENST00000435607 SEC13P55735 322 aa11.15□□□□□ -0.62
SCN4A-201ENST00000435607 VITQ6UXI7 678 aa11.15□□□□□ -0.62
SCN4A-201ENST00000435607 SLC29A4Q7RTT9 530 aa11.15□□□□□ -0.62
SCN4A-201ENST00000435607 ZNF567Q8N184 647 aa11.15□□□□□ -0.62
SCN4A-201ENST00000435607 OR4C6Q8NH72 309 aa11.15□□□□□ -0.62
SCN4A-201ENST00000435607 RDH8Q9NYR8 311 aa11.15□□□□□ -0.62
SCN4A-201ENST00000435607 METTL21EPA6NDL7 271 aa11.15□□□□□ -0.62
SCN4A-201ENST00000435607 REM1O75628 298 aa11.15□□□□□ -0.62
SCN4A-201ENST00000435607 KAT7O95251 611 aa11.15□□□□□ -0.62
SCN4A-201ENST00000435607 PTENP60484 403 aa11.15□□□□□ -0.62
SCN4A-201ENST00000435607 TLR1Q15399 786 aa11.15□□□□□ -0.62
SCN4A-201ENST00000435607 EIF2S3LQ2VIR3 472 aaKnown RBP11.15□□□□□ -0.62
SCN4A-201ENST00000435607 PLPPR4Q7Z2D5 763 aa11.15□□□□□ -0.62
SCN4A-201ENST00000435607 AKT1S1Q96B36 256 aa11.15□□□□□ -0.62
SCN4A-201ENST00000435607 BTN2A3PQ96KV6 586 aa11.15□□□□□ -0.62
SCN4A-201ENST00000435607 PIH1D1Q9NWS0 290 aaKnown RBP11.15□□□□□ -0.62
SCN4A-201ENST00000435607 FBXW2Q9UKT8 454 aa11.15□□□□□ -0.62
SCN4A-201ENST00000435607 OAS3Q9Y6K5 1087 aaKnown RBP11.15□□□□□ -0.62
SCN4A-201ENST00000435607 COL1A2P08123 1366 aa11.15□□□□□ -0.62
SCN4A-201ENST00000435607 PSMD11O00231 422 aa11.15□□□□□ -0.62
SCN4A-201ENST00000435607 PRMT5O14744 637 aaPredicted RBP11.15□□□□□ -0.62
SCN4A-201ENST00000435607 SLC12A3P55017 1021 aa11.15□□□□□ -0.62
SCN4A-201ENST00000435607 DPYSL3Q14195 570 aa11.15□□□□□ -0.62
SCN4A-201ENST00000435607 CCSAPQ6IQ19 270 aaPredicted RBP11.15□□□□□ -0.62
SCN4A-201ENST00000435607 FBXO15Q8NCQ5 510 aaPredicted RBP11.15□□□□□ -0.62
SCN4A-201ENST00000435607 KLHL6Q8WZ60 621 aa11.15□□□□□ -0.62
SCN4A-201ENST00000435607 CERS2Q96G23 380 aa11.15□□□□□ -0.62
SCN4A-201ENST00000435607 MFSD14AQ96MC6 490 aa11.15□□□□□ -0.62
SCN4A-201ENST00000435607 MGME1Q9BQP7 344 aa11.15□□□□□ -0.62
SCN4A-201ENST00000435607 SMURF1Q9HCE7 757 aa11.15□□□□□ -0.62
SCN4A-201ENST00000435607 SPATA31E1Q6ZUB1 1445 aa11.15□□□□□ -0.62
SCN4A-201ENST00000435607 AREL1O15033 823 aa11.15□□□□□ -0.62
SCN4A-201ENST00000435607 PEX11AO75192 247 aa11.15□□□□□ -0.62
SCN4A-201ENST00000435607 RLN2P04090 185 aa11.15□□□□□ -0.62
SCN4A-201ENST00000435607 DUSP4Q13115 394 aa11.15□□□□□ -0.62
SCN4A-201ENST00000435607 TAF5Q15542 800 aa11.15□□□□□ -0.62
SCN4A-201ENST00000435607 DNM1P34Q6PK57 102 aa11.15□□□□□ -0.62
SCN4A-201ENST00000435607 SLC5A5Q92911 643 aa11.15□□□□□ -0.62
SCN4A-201ENST00000435607 C2CD2Q9Y426 696 aa11.15□□□□□ -0.62
SCN4A-201ENST00000435607 SPIN1Q9Y657 262 aaPredicted RBP11.15□□□□□ -0.62
SCN4A-201ENST00000435607 GLYATL1P3A0A0U1RQE8 302 aa11.15□□□□□ -0.63
SCN4A-201ENST00000435607 CNTN2Q02246 1040 aa11.15□□□□□ -0.63
SCN4A-201ENST00000435607 PCDH1Q08174 1060 aa11.15□□□□□ -0.63
SCN4A-201ENST00000435607 OTOP2Q7RTS6 562 aa11.15□□□□□ -0.63
SCN4A-201ENST00000435607 TMEM68Q96MH6 324 aa11.15□□□□□ -0.63
SCN4A-201ENST00000435607 GGA2Q9UJY4 613 aa11.15□□□□□ -0.63
SCN4A-201ENST00000435607 F8VP50 259 aa11.15□□□□□ -0.63
SCN4A-201ENST00000435607 SPAM1P38567 509 aa11.15□□□□□ -0.63
SCN4A-201ENST00000435607 MLLT3P42568 568 aaPredicted RBP11.15□□□□□ -0.63
SCN4A-201ENST00000435607 FOXK1P85037 733 aa11.15□□□□□ -0.63
SCN4A-201ENST00000435607 VLDLRP98155 873 aa11.15□□□□□ -0.63
SCN4A-201ENST00000435607 ST3GAL1Q11201 340 aa11.15□□□□□ -0.63
SCN4A-201ENST00000435607 PRAMEF19Q5SWL8 479 aa11.15□□□□□ -0.63
SCN4A-201ENST00000435607 ERICH5Q6P6B1 374 aa11.15□□□□□ -0.63
SCN4A-201ENST00000435607 PIWIL4Q7Z3Z4 852 aaKnown RBP11.15□□□□□ -0.63
SCN4A-201ENST00000435607 CFAP206Q8IYR0 622 aa11.15□□□□□ -0.63
SCN4A-201ENST00000435607 SLC22A15Q8IZD6 547 aa11.15□□□□□ -0.63
SCN4A-201ENST00000435607 TOP6BLQ8N6T0 577 aa11.15□□□□□ -0.63
SCN4A-201ENST00000435607 TC2NQ8N9U0 490 aa11.15□□□□□ -0.63
SCN4A-201ENST00000435607 OR52K1Q8NGK4 314 aa11.15□□□□□ -0.63
SCN4A-201ENST00000435607 S100ZQ8WXG8 99 aa11.15□□□□□ -0.63
SCN4A-201ENST00000435607 COQ8BQ96D53 544 aa11.15□□□□□ -0.63
SCN4A-201ENST00000435607 TMBIM4Q9HC24 238 aa11.15□□□□□ -0.63
SCN4A-201ENST00000435607 FAM105AQ9NUU6 356 aa11.15□□□□□ -0.63
SCN4A-201ENST00000435607 CLCA3PQ9Y6N3 262 aa11.15□□□□□ -0.63
SCN4A-201ENST00000435607 PGLSO95336 258 aa11.14□□□□□ -0.63
SCN4A-201ENST00000435607 KDELR1P24390 212 aa11.14□□□□□ -0.63
SCN4A-201ENST00000435607 CDK18Q07002 472 aa11.14□□□□□ -0.63
SCN4A-201ENST00000435607 SLC20A2Q08357 652 aa11.14□□□□□ -0.63
SCN4A-201ENST00000435607 AMZ1Q400G9 498 aa11.14□□□□□ -0.63
SCN4A-201ENST00000435607 DGLUCYQ7Z3D6 616 aa11.14□□□□□ -0.63
SCN4A-201ENST00000435607 TMEM17Q86X19 198 aa11.14□□□□□ -0.63
SCN4A-201ENST00000435607 ZNF433Q8N7K0 673 aaPredicted RBP11.14□□□□□ -0.63
SCN4A-201ENST00000435607 NDC1Q9BTX1 674 aa11.14□□□□□ -0.63
SCN4A-201ENST00000435607 SCAMP3O14828 347 aaKnown RBP11.14□□□□□ -0.63
SCN4A-201ENST00000435607 TNFP01375 233 aa11.14□□□□□ -0.63
SCN4A-201ENST00000435607 RBL1P28749 1068 aa11.14□□□□□ -0.63
SCN4A-201ENST00000435607 WASP42768 502 aa11.14□□□□□ -0.63
SCN4A-201ENST00000435607 CYP4F2P78329 520 aa11.14□□□□□ -0.63
SCN4A-201ENST00000435607 CYP4F3Q08477 520 aa11.14□□□□□ -0.63
SCN4A-201ENST00000435607 MRPL49Q13405 166 aaKnown RBP11.14□□□□□ -0.63
SCN4A-201ENST00000435607 SLC24A5Q71RS6 500 aa11.14□□□□□ -0.63
SCN4A-201ENST00000435607 FAM129CQ86XR2 697 aa11.14□□□□□ -0.63
SCN4A-201ENST00000435607 CFL2Q9Y281 166 aa11.14□□□□□ -0.63
SCN4A-201ENST00000435607 DERAQ9Y315 318 aa11.14□□□□□ -0.63
SCN4A-201ENST00000435607 DBTP11182 482 aaKnown RBP11.14□□□□□ -0.63
SCN4A-201ENST00000435607 ALADP13716 330 aa11.14□□□□□ -0.63
SCN4A-201ENST00000435607 TBATAQ96M53 351 aa11.14□□□□□ -0.63
SCN4A-201ENST00000435607 KCNK4Q9NYG8 393 aa11.14□□□□□ -0.63
SCN4A-201ENST00000435607 TMPRSS11EQ9UL52 423 aa11.14□□□□□ -0.63
SCN4A-201ENST00000435607 L7N2F9 121 aa11.14□□□□□ -0.63
SCN4A-201ENST00000435607 GLI1P08151 1106 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms