RNA–Protein interactions for RNA: ENST00000434472.6

CD44-210, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,634 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-210ENST00000434472 HNRNPRO43390 633 aaKnown RBP10.36□□□□□ -0.75
CD44-210ENST00000434472 ECI2O75521 394 aa10.36□□□□□ -0.75
CD44-210ENST00000434472 GJB3O75712 270 aa10.36□□□□□ -0.75
CD44-210ENST00000434472 ATP6AP2O75787 350 aa10.36□□□□□ -0.75
CD44-210ENST00000434472 SIX3O95343 332 aaPredicted RBP10.36□□□□□ -0.75
CD44-210ENST00000434472 GALTP07902 379 aa10.36□□□□□ -0.75
CD44-210ENST00000434472 UROSP10746 265 aa10.36□□□□□ -0.75
CD44-210ENST00000434472 HSD17B1P14061 328 aa10.36□□□□□ -0.75
CD44-210ENST00000434472 ATF6P18850 670 aa10.36□□□□□ -0.75
CD44-210ENST00000434472 ATXN3P54252 364 aaPredicted RBP10.36□□□□□ -0.75
CD44-210ENST00000434472 CREB5Q02930 508 aa10.36□□□□□ -0.75
CD44-210ENST00000434472 PTPRNQ16849 979 aa10.36□□□□□ -0.75
CD44-210ENST00000434472 NAIF1Q69YI7 327 aaPredicted RBP10.36□□□□□ -0.75
CD44-210ENST00000434472 PHYKPLQ8IUZ5 450 aa10.36□□□□□ -0.75
CD44-210ENST00000434472 HERC6Q8IVU3 1022 aa10.36□□□□□ -0.75
CD44-210ENST00000434472 CHCHD4Q8N4Q1 142 aa10.36□□□□□ -0.75
CD44-210ENST00000434472 PACRGLQ8N7B6 248 aa10.36□□□□□ -0.75
CD44-210ENST00000434472 PNPLA1Q8N8W4 532 aa10.36□□□□□ -0.75
CD44-210ENST00000434472 ANKFN1Q8N957 763 aa10.36□□□□□ -0.75
CD44-210ENST00000434472 FAM156AQ8NDB6 213 aa10.36□□□□□ -0.75
CD44-210ENST00000434472 FBXO22Q8NEZ5 403 aa10.36□□□□□ -0.75
CD44-210ENST00000434472 LPCAT1Q8NF37 534 aa10.36□□□□□ -0.75
CD44-210ENST00000434472 OR56A4Q8NGH8 313 aa10.36□□□□□ -0.75
CD44-210ENST00000434472 B3GALT6Q96L58 329 aa10.36□□□□□ -0.75
CD44-210ENST00000434472 ZNF597Q96LX8 424 aa10.36□□□□□ -0.75
CD44-210ENST00000434472 ZNF512Q96ME7 567 aaPredicted RBP10.36□□□□□ -0.75
CD44-210ENST00000434472 PCDHAC1Q9H158 963 aa10.36□□□□□ -0.75
CD44-210ENST00000434472 C8orf4Q9NR00 106 aa10.36□□□□□ -0.75
CD44-210ENST00000434472 SDR39U1Q9NRG7 319 aaPredicted RBP10.36□□□□□ -0.75
CD44-210ENST00000434472 RIC8BQ9NVN3 520 aa10.36□□□□□ -0.75
CD44-210ENST00000434472 TRPM5Q9NZQ8 1165 aa10.36□□□□□ -0.75
CD44-210ENST00000434472 HSFX1Q9UBD0 423 aa10.36□□□□□ -0.75
CD44-210ENST00000434472 ABCD2Q9UBJ2 740 aa10.36□□□□□ -0.75
CD44-210ENST00000434472 MTRRQ9UBK8 725 aa10.36□□□□□ -0.75
CD44-210ENST00000434472 SRRDQ9UH36 339 aa10.36□□□□□ -0.75
CD44-210ENST00000434472 BACE2Q9Y5Z0 518 aa10.36□□□□□ -0.75
CD44-210ENST00000434472 VWA8A3KMH1 1905 aa10.36□□□□□ -0.75
CD44-210ENST00000434472 ANKRD36A6QL64 1941 aa10.36□□□□□ -0.75
CD44-210ENST00000434472 ZNF840PA6NDX5 716 aa10.36□□□□□ -0.75
CD44-210ENST00000434472 H7C0S8 307 aa10.36□□□□□ -0.75
CD44-210ENST00000434472 SNX2O60749 519 aa10.36□□□□□ -0.75
CD44-210ENST00000434472 ESRRBO95718 433 aa10.36□□□□□ -0.75
CD44-210ENST00000434472 LATS1O95835 1130 aa10.36□□□□□ -0.75
CD44-210ENST00000434472 CLPTM1O96005 669 aa10.36□□□□□ -0.75
CD44-210ENST00000434472 MT-CO1P00395 513 aa10.36□□□□□ -0.75
CD44-210ENST00000434472 SMIM18P0DKX4 95 aa10.36□□□□□ -0.75
CD44-210ENST00000434472 HGFP14210 728 aa10.36□□□□□ -0.75
CD44-210ENST00000434472 ZNF26P17031 533 aaPredicted RBP10.36□□□□□ -0.75
CD44-210ENST00000434472 PSMC3P17980 439 aa10.36□□□□□ -0.75
CD44-210ENST00000434472 HDCP19113 662 aa10.36□□□□□ -0.75
CD44-210ENST00000434472 IL10P22301 178 aa10.36□□□□□ -0.75
CD44-210ENST00000434472 GSTT1P30711 240 aa10.36□□□□□ -0.75
CD44-210ENST00000434472 MC4RP32245 332 aa10.36□□□□□ -0.75
CD44-210ENST00000434472 PPP3CCP48454 512 aa10.36□□□□□ -0.75
CD44-210ENST00000434472 ADARP55265 1226 aaKnown RBP10.36□□□□□ -0.75
CD44-210ENST00000434472 KCNK10P57789 538 aa10.36□□□□□ -0.75
CD44-210ENST00000434472 IL2P60568 153 aa10.36□□□□□ -0.75
CD44-210ENST00000434472 TXNL4AP83876 142 aaKnown RBP10.36□□□□□ -0.75
CD44-210ENST00000434472 RALGDSQ12967 914 aa10.36□□□□□ -0.75
CD44-210ENST00000434472 USP41Q3LFD5 358 aa10.36□□□□□ -0.75
CD44-210ENST00000434472 PDCD4Q53EL6 469 aaKnown RBP10.36□□□□□ -0.75
CD44-210ENST00000434472 SETMARQ53H47 684 aaPredicted RBP10.36□□□□□ -0.75
CD44-210ENST00000434472 C6orf10Q5SRN2 563 aa10.36□□□□□ -0.75
CD44-210ENST00000434472 SLC8B1Q6J4K2 584 aa10.36□□□□□ -0.75
CD44-210ENST00000434472 LAYNQ6UX15 382 aa10.36□□□□□ -0.75
CD44-210ENST00000434472 DENND1CQ8IV53 801 aa10.36□□□□□ -0.75
CD44-210ENST00000434472 GALNT4Q8N4A0 578 aa10.36□□□□□ -0.75
CD44-210ENST00000434472 MDGA1Q8NFP4 955 aa10.36□□□□□ -0.75
CD44-210ENST00000434472 DBF4BQ8NFT6 615 aa10.36□□□□□ -0.75
CD44-210ENST00000434472 OR9I1Q8NGQ6 314 aa10.36□□□□□ -0.75
CD44-210ENST00000434472 SH3RF2Q8TEC5 729 aa10.36□□□□□ -0.75
CD44-210ENST00000434472 NAT14Q8WUY8 206 aa10.36□□□□□ -0.75
CD44-210ENST00000434472 LRTOMTQ8WZ04 291 aa10.36□□□□□ -0.75
CD44-210ENST00000434472 FUBP1Q96AE4 644 aaKnown RBP10.36□□□□□ -0.75
CD44-210ENST00000434472 DGCR14Q96DF8 476 aaKnown RBP10.36□□□□□ -0.75
CD44-210ENST00000434472 CNBD2Q96M20 576 aa10.36□□□□□ -0.75
CD44-210ENST00000434472 GPR21Q99679 349 aa10.36□□□□□ -0.75
CD44-210ENST00000434472 HAUS8Q9BT25 410 aa10.36□□□□□ -0.75
CD44-210ENST00000434472 TRIM54Q9BYV2 358 aa10.36□□□□□ -0.75
CD44-210ENST00000434472 SLC2A11Q9BYW1 496 aa10.36□□□□□ -0.75
CD44-210ENST00000434472 PIDD1Q9HB75 910 aa10.36□□□□□ -0.75
CD44-210ENST00000434472 THEGQ9P2T0 379 aa10.36□□□□□ -0.75
CD44-210ENST00000434472 POLG2Q9UHN1 485 aa10.36□□□□□ -0.75
CD44-210ENST00000434472 ABT1Q9ULW3 272 aaKnown RBP10.36□□□□□ -0.75
CD44-210ENST00000434472 LZTS1Q9Y250 596 aa10.36□□□□□ -0.75
CD44-210ENST00000434472 RAI2Q9Y5P3 530 aa10.36□□□□□ -0.75
CD44-210ENST00000434472 TTC3P53804 2025 aa10.35□□□□□ -0.75
CD44-210ENST00000434472 NPEPPSL1A6NEC2 478 aa10.35□□□□□ -0.75
CD44-210ENST00000434472 GRXCR2A6NFK2 248 aa10.35□□□□□ -0.75
CD44-210ENST00000434472 TBKBP1A7MCY6 615 aa10.35□□□□□ -0.75
CD44-210ENST00000434472 ANKRD66B4E2M5 251 aa10.35□□□□□ -0.75
CD44-210ENST00000434472 BTN3A1O00481 513 aa10.35□□□□□ -0.75
CD44-210ENST00000434472 COCHO43405 550 aa10.35□□□□□ -0.75
CD44-210ENST00000434472 NPPAP01160 153 aa10.35□□□□□ -0.75
CD44-210ENST00000434472 PRLP01236 227 aa10.35□□□□□ -0.75
CD44-210ENST00000434472 ESR1P03372 595 aa10.35□□□□□ -0.75
CD44-210ENST00000434472 F11P03951 625 aa10.35□□□□□ -0.75
CD44-210ENST00000434472 LINC00032P0C843 101 aa10.35□□□□□ -0.75
CD44-210ENST00000434472 PRR35P0CG20 571 aa10.35□□□□□ -0.75
CD44-210ENST00000434472 BMP2P12643 396 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms