RNA–Protein interactions for RNA: ENST00000431461.1

CDC40-204, Transcript of cell division cycle 40, humanhuman

TSL 3

Gene CDC40, Length 400 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC40-204ENST00000431461 VILLO15195 856 aa2.14□□□□□ -2.07
CDC40-204ENST00000431461 SLC16A5O15375 505 aa2.14□□□□□ -2.07
CDC40-204ENST00000431461 ZIC3O60481 467 aa2.14□□□□□ -2.07
CDC40-204ENST00000431461 NKX2-2O95096 273 aa2.14□□□□□ -2.07
CDC40-204ENST00000431461 CSPG5O95196 566 aa2.14□□□□□ -2.07
CDC40-204ENST00000431461 RB1P06400 928 aa2.14□□□□□ -2.07
CDC40-204ENST00000431461 VPREB1P12018 145 aa2.14□□□□□ -2.07
CDC40-204ENST00000431461 BDKRB2P30411 391 aa2.14□□□□□ -2.07
CDC40-204ENST00000431461 UBA7P41226 1012 aa2.14□□□□□ -2.07
CDC40-204ENST00000431461 TAF6P49848 677 aa2.14□□□□□ -2.07
CDC40-204ENST00000431461 F2RL1P55085 397 aa2.14□□□□□ -2.07
CDC40-204ENST00000431461 MLLT10P55197 1068 aa2.14□□□□□ -2.07
CDC40-204ENST00000431461 HNRNPH2P55795 449 aaKnown RBP2.14□□□□□ -2.07
CDC40-204ENST00000431461 TUBA1BP68363 451 aa2.14□□□□□ -2.07
CDC40-204ENST00000431461 ABATP80404 500 aa2.14□□□□□ -2.07
CDC40-204ENST00000431461 SREBF2Q12772 1141 aa2.14□□□□□ -2.07
CDC40-204ENST00000431461 TROAPQ12815 778 aa2.14□□□□□ -2.07
CDC40-204ENST00000431461 GRIK3Q13003 919 aa2.14□□□□□ -2.07
CDC40-204ENST00000431461 GAGE5Q13069 117 aa2.14□□□□□ -2.07
CDC40-204ENST00000431461 GAGE6Q13070 117 aa2.14□□□□□ -2.07
CDC40-204ENST00000431461 MYBPC2Q14324 1141 aa2.14□□□□□ -2.07
CDC40-204ENST00000431461 OASLQ15646 514 aaKnown RBP2.14□□□□□ -2.07
CDC40-204ENST00000431461 NTRK2Q16620 822 aa2.14□□□□□ -2.07
CDC40-204ENST00000431461 PNLIPRP3Q17RR3 467 aa2.14□□□□□ -2.07
CDC40-204ENST00000431461 KIF19Q2TAC6 998 aa2.14□□□□□ -2.07
CDC40-204ENST00000431461 ACCSLQ4AC99 568 aa2.14□□□□□ -2.07
CDC40-204ENST00000431461 XKR9Q5GH70 373 aa2.14□□□□□ -2.07
CDC40-204ENST00000431461 FAM76BQ5HYJ3 339 aa2.14□□□□□ -2.07
CDC40-204ENST00000431461 CXorf66Q5JRM2 361 aaPredicted RBP2.14□□□□□ -2.07
CDC40-204ENST00000431461 RARS2Q5T160 578 aaKnown RBP2.14□□□□□ -2.07
CDC40-204ENST00000431461 LCE3CQ5T5A8 94 aa2.14□□□□□ -2.07
CDC40-204ENST00000431461 FAM109BQ6ICB4 259 aaPredicted RBP2.14□□□□□ -2.07
CDC40-204ENST00000431461 TTI2Q6NXR4 508 aa2.14□□□□□ -2.07
CDC40-204ENST00000431461 PRSS57Q6UWY2 283 aa2.14□□□□□ -2.07
CDC40-204ENST00000431461 KRT74Q7RTS7 529 aa2.14□□□□□ -2.07
CDC40-204ENST00000431461 ADGRA1Q86SQ6 560 aa2.14□□□□□ -2.07
CDC40-204ENST00000431461 TSPAN33Q86UF1 283 aa2.14□□□□□ -2.07
CDC40-204ENST00000431461 GPR180Q86V85 440 aa2.14□□□□□ -2.07
CDC40-204ENST00000431461 EXOC3L1Q86VI1 746 aa2.14□□□□□ -2.07
CDC40-204ENST00000431461 CLIP4Q8N3C7 705 aa2.14□□□□□ -2.07
CDC40-204ENST00000431461 TTC39CQ8N584 583 aa2.14□□□□□ -2.07
CDC40-204ENST00000431461 ANKRD52Q8NB46 1076 aa2.14□□□□□ -2.07
CDC40-204ENST00000431461 ARRDC2Q8TBH0 407 aa2.14□□□□□ -2.07
CDC40-204ENST00000431461 CREB3L4Q8TEY5 395 aa2.14□□□□□ -2.07
CDC40-204ENST00000431461 BICD1Q96G01 975 aa2.14□□□□□ -2.07
CDC40-204ENST00000431461 ACOX2Q99424 681 aa2.14□□□□□ -2.07
CDC40-204ENST00000431461 SDF4Q9BRK5 362 aa2.14□□□□□ -2.07
CDC40-204ENST00000431461 CHCHD6Q9BRQ6 235 aa2.14□□□□□ -2.07
CDC40-204ENST00000431461 HEMGNQ9BXL5 484 aa2.14□□□□□ -2.07
CDC40-204ENST00000431461 USP44Q9H0E7 712 aa2.14□□□□□ -2.07
CDC40-204ENST00000431461 PPP1R3EQ9H7J1 279 aa2.14□□□□□ -2.07
CDC40-204ENST00000431461 SCPEP1Q9HB40 452 aa2.14□□□□□ -2.07
CDC40-204ENST00000431461 GIMAP4Q9NUV9 329 aa2.14□□□□□ -2.07
CDC40-204ENST00000431461 HAUS2Q9NVX0 235 aa2.14□□□□□ -2.07
CDC40-204ENST00000431461 ZNF224Q9NZL3 707 aa2.14□□□□□ -2.07
CDC40-204ENST00000431461 OGFRQ9NZT2 677 aa2.14□□□□□ -2.07
CDC40-204ENST00000431461 MORF4L1Q9UBU8 362 aa2.14□□□□□ -2.07
CDC40-204ENST00000431461 STK39Q9UEW8 545 aa2.14□□□□□ -2.07
CDC40-204ENST00000431461 OR14J1Q9UGF5 321 aa2.14□□□□□ -2.07
CDC40-204ENST00000431461 SIX4Q9UIU6 781 aa2.14□□□□□ -2.07
CDC40-204ENST00000431461 KCNG2Q9UJ96 466 aa2.14□□□□□ -2.07
CDC40-204ENST00000431461 PNMA2Q9UL42 364 aa2.14□□□□□ -2.07
CDC40-204ENST00000431461 GPR34Q9UPC5 381 aa2.14□□□□□ -2.07
CDC40-204ENST00000431461 LOXL2Q9Y4K0 774 aa2.14□□□□□ -2.07
CDC40-204ENST00000431461 TMEM184BQ9Y519 407 aaPredicted RBP2.14□□□□□ -2.07
CDC40-204ENST00000431461 PCDHGB1Q9Y5G3 927 aa2.14□□□□□ -2.07
CDC40-204ENST00000431461 IGLV5-52A0A0A0MRZ9 124 aa2.13□□□□□ -2.07
CDC40-204ENST00000431461 A0A1B0GVT2 93 aa2.13□□□□□ -2.07
CDC40-204ENST00000431461 A0A1W2PQF6 199 aa2.13□□□□□ -2.07
CDC40-204ENST00000431461 FRMD3A2A2Y4 597 aa2.13□□□□□ -2.07
CDC40-204ENST00000431461 MAGEA13PA6NCF6 341 aa2.13□□□□□ -2.07
CDC40-204ENST00000431461 LILRA5A6NI73 299 aa2.13□□□□□ -2.07
CDC40-204ENST00000431461 EIF4E1BA6NMX2 242 aaKnown RBP2.13□□□□□ -2.07
CDC40-204ENST00000431461 BTBD18B2RXH4 712 aa2.13□□□□□ -2.07
CDC40-204ENST00000431461 B4DLN1 442 aa2.13□□□□□ -2.07
CDC40-204ENST00000431461 DVL1O14640 695 aa2.13□□□□□ -2.07
CDC40-204ENST00000431461 TIMM23O14925 209 aa2.13□□□□□ -2.07
CDC40-204ENST00000431461 SMAD9O15198 467 aaKnown RBP2.13□□□□□ -2.07
CDC40-204ENST00000431461 IPO8O15397 1037 aaKnown RBP2.13□□□□□ -2.07
CDC40-204ENST00000431461 OGG1O15527 345 aa2.13□□□□□ -2.07
CDC40-204ENST00000431461 KCNN4O15554 427 aa2.13□□□□□ -2.07
CDC40-204ENST00000431461 PLRG1O43660 514 aaKnown RBP2.13□□□□□ -2.07
CDC40-204ENST00000431461 PTP4A3O75365 173 aa2.13□□□□□ -2.07
CDC40-204ENST00000431461 SEC31AO94979 1220 aaKnown RBP2.13□□□□□ -2.07
CDC40-204ENST00000431461 GH2P01242 217 aa2.13□□□□□ -2.07
CDC40-204ENST00000431461 UMODP07911 640 aa2.13□□□□□ -2.07
CDC40-204ENST00000431461 CSH1P0DML2 217 aa2.13□□□□□ -2.07
CDC40-204ENST00000431461 CSH2P0DML3 217 aa2.13□□□□□ -2.07
CDC40-204ENST00000431461 PON1P27169 355 aa2.13□□□□□ -2.07
CDC40-204ENST00000431461 PBX3P40426 434 aa2.13□□□□□ -2.07
CDC40-204ENST00000431461 HOXA1P49639 335 aaPredicted RBP2.13□□□□□ -2.07
CDC40-204ENST00000431461 CAMPP49913 170 aa2.13□□□□□ -2.07
CDC40-204ENST00000431461 EFNA5P52803 228 aa2.13□□□□□ -2.07
CDC40-204ENST00000431461 MRPL12P52815 198 aaKnown RBP2.13□□□□□ -2.07
CDC40-204ENST00000431461 CTSCP53634 463 aa2.13□□□□□ -2.07
CDC40-204ENST00000431461 KRTAP10-3P60369 221 aa2.13□□□□□ -2.07
CDC40-204ENST00000431461 ERVFC1-1P60608 527 aa2.13□□□□□ -2.07
CDC40-204ENST00000431461 MC1RQ01726 317 aa2.13□□□□□ -2.07
CDC40-204ENST00000431461 CREB5Q02930 508 aa2.13□□□□□ -2.07
CDC40-204ENST00000431461 TRAF1Q13077 416 aa2.13□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms