RNA–Protein interactions for RNA: ENST00000430771.2

CHD4-202, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 527 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-202ENST00000430771 CCDC162PA2VCL2 907 aa10.93□□□□□ -0.66
CHD4-202ENST00000430771 FADS2P1A8MWK0 482 aa10.93□□□□□ -0.66
CHD4-202ENST00000430771 CFAP99D6REC4 459 aa10.93□□□□□ -0.66
CHD4-202ENST00000430771 CCL22O00626 93 aa10.93□□□□□ -0.66
CHD4-202ENST00000430771 BCAT2O15382 392 aaPredicted RBP10.93□□□□□ -0.66
CHD4-202ENST00000430771 EPN2O95208 641 aa10.93□□□□□ -0.66
CHD4-202ENST00000430771 SOD1P00441 154 aa10.93□□□□□ -0.66
CHD4-202ENST00000430771 OGNP20774 298 aaKnown RBP10.93□□□□□ -0.66
CHD4-202ENST00000430771 ITPKAP23677 461 aa10.93□□□□□ -0.66
CHD4-202ENST00000430771 HTR1BP28222 390 aa10.93□□□□□ -0.66
CHD4-202ENST00000430771 CD38P28907 300 aa10.93□□□□□ -0.66
CHD4-202ENST00000430771 FOXN2P32314 431 aa10.93□□□□□ -0.66
CHD4-202ENST00000430771 AFF3P51826 1226 aaKnown RBP10.93□□□□□ -0.66
CHD4-202ENST00000430771 THOP1P52888 689 aa10.93□□□□□ -0.66
CHD4-202ENST00000430771 XIAPP98170 497 aa10.93□□□□□ -0.66
CHD4-202ENST00000430771 CDK3Q00526 305 aa10.93□□□□□ -0.66
CHD4-202ENST00000430771 PTK2BQ14289 1009 aa10.93□□□□□ -0.66
CHD4-202ENST00000430771 FRG1Q14331 258 aaKnown RBP10.93□□□□□ -0.66
CHD4-202ENST00000430771 CHRNA6Q15825 494 aa10.93□□□□□ -0.66
CHD4-202ENST00000430771 LDLRAP1Q5SW96 308 aa10.93□□□□□ -0.66
CHD4-202ENST00000430771 RNF187Q5TA31 235 aaPredicted RBP10.93□□□□□ -0.66
CHD4-202ENST00000430771 LYPLAL1Q5VWZ2 237 aa10.93□□□□□ -0.66
CHD4-202ENST00000430771 LAIR1Q6GTX8 287 aa10.93□□□□□ -0.66
CHD4-202ENST00000430771 MRNIPQ6NTE8 343 aa10.93□□□□□ -0.66
CHD4-202ENST00000430771 ZNF449Q6P9G9 518 aa10.93□□□□□ -0.66
CHD4-202ENST00000430771 EMBQ6PCB8 327 aa10.93□□□□□ -0.66
CHD4-202ENST00000430771 CES3Q6UWW8 571 aa10.93□□□□□ -0.66
CHD4-202ENST00000430771 ABI3BPQ7Z7G0 1075 aa10.93□□□□□ -0.66
CHD4-202ENST00000430771 SYT12Q8IV01 421 aa10.93□□□□□ -0.66
CHD4-202ENST00000430771 DDHD1Q8NEL9 900 aa10.93□□□□□ -0.66
CHD4-202ENST00000430771 MYRIPQ8NFW9 859 aa10.93□□□□□ -0.66
CHD4-202ENST00000430771 OR4L1Q8NH43 312 aa10.93□□□□□ -0.66
CHD4-202ENST00000430771 GDAP1Q8TB36 358 aa10.93□□□□□ -0.66
CHD4-202ENST00000430771 ZNF398Q8TD17 642 aa10.93□□□□□ -0.66
CHD4-202ENST00000430771 HEXDCQ8WVB3 486 aa10.93□□□□□ -0.66
CHD4-202ENST00000430771 CDKL2Q92772 493 aa10.93□□□□□ -0.66
CHD4-202ENST00000430771 ATOH1Q92858 354 aaPredicted RBP10.93□□□□□ -0.66
CHD4-202ENST00000430771 GLYATL1Q969I3 302 aa10.93□□□□□ -0.66
CHD4-202ENST00000430771 CERS2Q96G23 380 aa10.93□□□□□ -0.66
CHD4-202ENST00000430771 C9orf72Q96LT7 481 aa10.93□□□□□ -0.66
CHD4-202ENST00000430771 SEMA4AQ9H3S1 761 aa10.93□□□□□ -0.66
CHD4-202ENST00000430771 VPS37BQ9H9H4 285 aa10.93□□□□□ -0.66
CHD4-202ENST00000430771 EBF2Q9HAK2 575 aa10.93□□□□□ -0.66
CHD4-202ENST00000430771 TM9SF3Q9HD45 589 aa10.93□□□□□ -0.66
CHD4-202ENST00000430771 MBNL1Q9NR56 388 aaKnown RBP10.93□□□□□ -0.66
CHD4-202ENST00000430771 C20orf96Q9NUD7 363 aaPredicted RBP10.93□□□□□ -0.66
CHD4-202ENST00000430771 GMEB2Q9UKD1 530 aa10.93□□□□□ -0.66
CHD4-202ENST00000430771 RAB21Q9UL25 225 aa10.93□□□□□ -0.66
CHD4-202ENST00000430771 VPS9D1Q9Y2B5 631 aa10.93□□□□□ -0.66
CHD4-202ENST00000430771 PCDHGA5Q9Y5G8 931 aa10.93□□□□□ -0.66
CHD4-202ENST00000430771 K7ESM1 405 aa10.92□□□□□ -0.66
CHD4-202ENST00000430771 GAPDHSO14556 408 aaPredicted RBP10.92□□□□□ -0.66
CHD4-202ENST00000430771 ERLIN1O75477 346 aa10.92□□□□□ -0.66
CHD4-202ENST00000430771 VAPBO95292 243 aa10.92□□□□□ -0.66
CHD4-202ENST00000430771 HOXC4P09017 264 aaPredicted RBP10.92□□□□□ -0.66
CHD4-202ENST00000430771 THEGLP0DJG4 465 aa10.92□□□□□ -0.66
CHD4-202ENST00000430771 MYBL2P10244 700 aa10.92□□□□□ -0.66
CHD4-202ENST00000430771 RALBP11234 206 aa10.92□□□□□ -0.66
CHD4-202ENST00000430771 ACRV1P26436 265 aa10.92□□□□□ -0.66
CHD4-202ENST00000430771 MAOBP27338 520 aa10.92□□□□□ -0.66
CHD4-202ENST00000430771 ARNTP27540 789 aa10.92□□□□□ -0.66
CHD4-202ENST00000430771 AKT1P31749 480 aa10.92□□□□□ -0.66
CHD4-202ENST00000430771 TRIM23P36406 574 aa10.92□□□□□ -0.66
CHD4-202ENST00000430771 TTPAP49638 278 aa10.92□□□□□ -0.66
CHD4-202ENST00000430771 C21orf59P57076 290 aa10.92□□□□□ -0.66
CHD4-202ENST00000430771 CLDN2P57739 230 aa10.92□□□□□ -0.66
CHD4-202ENST00000430771 PFN3P60673 137 aa10.92□□□□□ -0.66
CHD4-202ENST00000430771 GTF2H3Q13889 308 aa10.92□□□□□ -0.66
CHD4-202ENST00000430771 ITIH4Q14624 930 aa10.92□□□□□ -0.66
CHD4-202ENST00000430771 INPP5AQ14642 412 aa10.92□□□□□ -0.66
CHD4-202ENST00000430771 NFATC4Q14934 902 aa10.92□□□□□ -0.66
CHD4-202ENST00000430771 ATP13A5Q4VNC0 1218 aa10.92□□□□□ -0.66
CHD4-202ENST00000430771 ZNF470Q6ECI4 717 aa10.92□□□□□ -0.66
CHD4-202ENST00000430771 CERS6Q6ZMG9 384 aa10.92□□□□□ -0.66
CHD4-202ENST00000430771 CCNI2Q6ZMN8 369 aaPredicted RBP10.92□□□□□ -0.66
CHD4-202ENST00000430771 MACC1Q6ZN28 852 aa10.92□□□□□ -0.66
CHD4-202ENST00000430771 CAPN12Q6ZSI9 719 aa10.92□□□□□ -0.66
CHD4-202ENST00000430771 TRMT10CQ7L0Y3 403 aaKnown RBP10.92□□□□□ -0.66
CHD4-202ENST00000430771 TAS2R42Q7RTR8 314 aa10.92□□□□□ -0.66
CHD4-202ENST00000430771 SDCCAG8Q86SQ7 713 aaPredicted RBP10.92□□□□□ -0.66
CHD4-202ENST00000430771 DCP2Q8IU60 420 aaKnown RBP10.92□□□□□ -0.66
CHD4-202ENST00000430771 IGDCC3Q8IVU1 814 aa10.92□□□□□ -0.66
CHD4-202ENST00000430771 NXPE1Q8N323 547 aa10.92□□□□□ -0.66
CHD4-202ENST00000430771 MFSD2AQ8NA29 543 aa10.92□□□□□ -0.66
CHD4-202ENST00000430771 PLA2G15Q8NCC3 412 aa10.92□□□□□ -0.66
CHD4-202ENST00000430771 CEP76Q8TAP6 659 aa10.92□□□□□ -0.66
CHD4-202ENST00000430771 BTN2A2Q8WVV5 523 aa10.92□□□□□ -0.66
CHD4-202ENST00000430771 PIGKQ92643 395 aa10.92□□□□□ -0.66
CHD4-202ENST00000430771 KLHDC7BQ96G42 594 aa10.92□□□□□ -0.66
CHD4-202ENST00000430771 HIC2Q96JB3 615 aa10.92□□□□□ -0.66
CHD4-202ENST00000430771 FCRL3Q96P31 734 aaPredicted RBP10.92□□□□□ -0.66
CHD4-202ENST00000430771 AGAP2Q99490 1192 aa10.92□□□□□ -0.66
CHD4-202ENST00000430771 TRIM56Q9BRZ2 755 aaKnown RBP10.92□□□□□ -0.66
CHD4-202ENST00000430771 APOOQ9BUR5 198 aa10.92□□□□□ -0.66
CHD4-202ENST00000430771 TEX101Q9BY14 249 aa10.92□□□□□ -0.66
CHD4-202ENST00000430771 PARD6BQ9BYG5 372 aa10.92□□□□□ -0.66
CHD4-202ENST00000430771 SUDS3Q9H7L9 328 aaPredicted RBP10.92□□□□□ -0.66
CHD4-202ENST00000430771 PPANQ9NQ55 473 aaKnown RBP10.92□□□□□ -0.66
CHD4-202ENST00000430771 NSMCE4AQ9NXX6 385 aa10.92□□□□□ -0.66
CHD4-202ENST00000430771 NINJ2Q9NZG7 142 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 142 ms